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Fig. 1 in Field and experimental evidence of a new caiman trypanosome species closely phylogenetically related to fish trypanosomes and transmitted by leeches
Fig. 1. Geographical origin of crocodilian trypanosomes included in the V7V8 SSU rRNA dendrogram inferred to compare the barcode sequences between the new and known trypanosomes from crocodilians and other species of aquatic and semi aquatic hosts. The clade comprising T. clandestinus n. sp. nested into the Aquatic clade closely related to fish trypanosomes whereas sequences of the other new species formed the clade Cay03, which clustered with T. terena, T. grayi and T. ralphi in the Crocodilian Terrestrial clade. The host species and geographic origin and Genbank accession numbers of sequences from the crocodilian trypanosomes are shown in Table 1. Numbers at nodes are bootstrap support values>50% (P/ML) derived from 500 replicates.
Fig. 2 Phylogenetic tree showing the relation between the Saudi Arabian haplotypes with 65 in Three species of Echinococcus granulosus sensu lato infect camels on the Arabian Peninsula
Fig. 2 Phylogenetic tree showing the relation between the Saudi Arabian haplotypes with 65 reference sequences. The Saudi Arabian haplotypes (H01-09) are in bold. The reference sequences along with their accession numbers and origin of isolate were included for each. T. solium was used as an outgroup taxon. The branch to outgroup was shortened by 0.2 substitutions per site
Figure 3 in Molecular characterization and phylogenetic assessment of agricultural-related noctuids (Lepidoptera: Noctuidae) of South America
Figure 3 Continuation of phylogram in Fig. 2. The phylogenetic hypothesis of the Feltia + Agrotis clade based on a maximum likelihood analysis. Numbers given above branches are bootstrap values (>50%). GenBank accession numbers are provided for newly sequenced specimens.
Figure 2 in Molecular characterization and phylogenetic assessment of agricultural-related noctuids (Lepidoptera: Noctuidae) of South America
Figure 2 The phylogenetic relationships of the specimens sequenced and those mined from GenBank, based on a maximum likelihood analysis. Numbers given above branches are bootstrap values (>50%). The Feltia + Agrotis clade is shown in more detail in Fig. 3. GenBank accession numbers are provided for newly sequenced specimens.
Text-fig. 6. Most parsimonious tree obtained after addition of Acaciaephyllum to the data set of Doyle (2008), with modifications discussed in the text, and with relationships of other taxa fixed with a backbone constraint tree based on results of Doyle (2008). Relative parsimony of alternative positions of Acaciaephyllum is indicated as in Text-fig. 2. Gnet = Gnetales. in Early Cretaceous Monocots: A Phylogenetic Evaluation
Text-fig. 6. Most parsimonious tree obtained after addition of Acaciaephyllum to the data set of Doyle (2008), with modifications discussed in the text, and with relationships of other taxa fixed with a backbone constraint tree based on results of Doyle (2008). Relative parsimony of alternative positions of Acaciaephyllum is indicated as in Text-fig. 2. Gnet = Gnetales.
Text-fig. 4. Most parsimonious trees obtained after addition of Virginianthus (with "Liliacidites" minutus pollen) to the (A) D&E and (B) J/M trees. Relative parsimony of alternative positions of Virginianthus is indicated as in Text-fig. 2; abbreviations as in Text-fig. 1. in Early Cretaceous Monocots: A Phylogenetic Evaluation
Text-fig. 4. Most parsimonious trees obtained after addition of Virginianthus (with "Liliacidites" minutus pollen) to the (A) D&E and (B) J/M trees. Relative parsimony of alternative positions of Virginianthus is indicated as in Text-fig. 2; abbreviations as in Text-fig. 1.
Text-fig. 3. One of two most parsimonious trees obtained after addition of Anacostia (with Similipollis pollen) to the D&E tree. Relative parsimony of alternative positions of Anacostia is indicated as in Text-fig. 2; abbreviations as in Text-fig. 1. in Early Cretaceous Monocots: A Phylogenetic Evaluation
Text-fig. 3. One of two most parsimonious trees obtained after addition of Anacostia (with Similipollis pollen) to the D&E tree. Relative parsimony of alternative positions of Anacostia is indicated as in Text-fig. 2; abbreviations as in Text-fig. 1.
Text-fig. 5. Most parsimonious trees obtained after addition of the Pennipollis plant to the (A) D&E and (B) J/M trees. Relative parsimony of alternative positions of the Pennipollis plant is indicated as in Text-fig. 2; abbreviations as in Text-fig. 1. in Early Cretaceous Monocots: A Phylogenetic Evaluation
Text-fig. 5. Most parsimonious trees obtained after addition of the Pennipollis plant to the (A) D&E and (B) J/M trees. Relative parsimony of alternative positions of the Pennipollis plant is indicated as in Text-fig. 2; abbreviations as in Text-fig. 1.
Fig. 76 in PHYLOGENETIC SYSTEMATICS OF DART-POISON FROGS AND THEIR RELATIVES (AMPHIBIA: ATHESPHATANURA: DENDROBATIDAE)
Fig. 76. Strict consensus of 25,872 most parsimonious trees of 46,520 steps: relationships among dendrobatids. Numbers above branches are Bremer support values. Numbers following terminal names are unique sample identifiers. Terminals without numbers or with alphanumeric identifiers (GenBank numbers) were not sequenced for the present study or Frost et al. (2006) and were taken from GenBank. Unidentified species taken from GenBank are labeled as originally published. Upper right inset shows entire cladogram and corresponding figure numbers, with present view in black.
Fig. 68 in PHYLOGENETIC SYSTEMATICS OF DART-POISON FROGS AND THEIR RELATIVES (AMPHIBIA: ATHESPHATANURA: DENDROBATIDAE)
Fig. 68. Length variation in character 142, retroarticular process of the mandible. A: nocturnus, AMNH 130041. B: riveroi, AMNH 134142. C: vittatus, AMNH 118386. D: lehmanni Myers and Daly, AMNH118442. E: pratti, AMNH118364. F: ''Neblina species'', AMNH 118667.
Fig. 72 in PHYLOGENETIC SYSTEMATICS OF DART-POISON FROGS AND THEIR RELATIVES (AMPHIBIA: ATHESPHATANURA: DENDROBATIDAE)
Fig. 72. Strict consensus of 25,872 most parsimonious trees of 46,520 steps: relationships among dendrobatids. Numbers above branches are Bremer support values. Numbers following terminal names are unique sample identifiers. Terminals without numbers or with alphanumeric identifiers (GenBank numbers) were not sequenced for the present study or Frost et al. (2006) and were taken from GenBank. Unidentified species taken from GenBank are labeled as originally published. Upper right inset shows entire cladogram and corresponding figure numbers, with present view in black.
Fig. 74 in PHYLOGENETIC SYSTEMATICS OF DART-POISON FROGS AND THEIR RELATIVES (AMPHIBIA: ATHESPHATANURA: DENDROBATIDAE)
Fig. 74. Strict consensus of 25,872 most parsimonious trees of 46,520 steps: relationships among dendrobatids. Numbers above branches are Bremer support values. Numbers following terminal names are unique sample identifiers. Terminals without numbers or with alphanumeric identifiers (GenBank numbers) were not sequenced for the present study or Frost et al. (2006) and were taken from GenBank. Unidentified species taken from GenBank are labeled as originally published. Upper right inset shows entire cladogram and corresponding figure numbers, with present view in black.
Fig. 62. Character 105, reproductive amplexus. State 2 in PHYLOGENETIC SYSTEMATICS OF DART-POISON FROGS AND THEIR RELATIVES (AMPHIBIA: ATHESPHATANURA: DENDROBATIDAE)
Fig. 62. Character 105, reproductive amplexus. State 2, cephalic amplexus (anthonyi, AMNH live exhibit) shown in anterior (A) and lateral (B) aspects.
Fig. 63. Character 109, dorsal larval transport. State 1 in PHYLOGENETIC SYSTEMATICS OF DART-POISON FROGS AND THEIR RELATIVES (AMPHIBIA: ATHESPHATANURA: DENDROBATIDAE)
Fig. 63. Character 109, dorsal larval transport. State 1, present (fraterdanieli, specimens at UVC). This male nurse frog was transporting 12 tadpoles.
Fig. 57 in PHYLOGENETIC SYSTEMATICS OF DART-POISON FROGS AND THEIR RELATIVES (AMPHIBIA: ATHESPHATANURA: DENDROBATIDAE)
Fig. 57. Anterior view of the open mouth of the dendrobatid praderioi (CPI 10203) showing the short, tapered median lingual process (MLP).
Fig. 55. Character 70, m. semitendinosus binding tendon. State 1 in PHYLOGENETIC SYSTEMATICS OF DART-POISON FROGS AND THEIR RELATIVES (AMPHIBIA: ATHESPHATANURA: DENDROBATIDAE)
Fig. 55. Character 70, m. semitendinosus binding tendon. State 1, present (aurotaenia, AMNH 161109), photograph (left) and outline drawing (right) showing view of the concealed surface of the knee. The mm. gracilis complex is deflected ventrally to reveal the dorsad ''ranid'' path of the m. semitendinosus and the secondary binding tendon that straps it to the outer edge of the mm. gracilis complex.
Fig. 54. Character 69, m in PHYLOGENETIC SYSTEMATICS OF DART-POISON FROGS AND THEIR RELATIVES (AMPHIBIA: ATHESPHATANURA: DENDROBATIDAE)
Fig. 54. Character 69, m. semitendinosus insertion. Photograph (left) and outline drawing (right) of ventral view of distal thigh of Thoropa miliaris (AMNH 17044), showing state 0, ventrad ''bufonid'' path of insertion. Arrow indicates the m. semitendinosus tendon of insertion.
Fig. 52. Character 67 in PHYLOGENETIC SYSTEMATICS OF DART-POISON FROGS AND THEIR RELATIVES (AMPHIBIA: ATHESPHATANURA: DENDROBATIDAE)
Fig. 52. Character 67, adult testis (mesorchium) color. State 2, entirely pigmented testes (claudiae, AMNH 124257) in ventral view.
Fig. 46. Character 61, male throat color. A in PHYLOGENETIC SYSTEMATICS OF DART-POISON FROGS AND THEIR RELATIVES (AMPHIBIA: ATHESPHATANURA: DENDROBATIDAE)
Fig. 46. Character 61, male throat color. A: State 0, pale, free or almost free of melanophores (''Neblina species'', AMNH 118689). B: State 1, dark due to absence of iridophores (abditaurantius, ICN 9853). This character-state is inconspicuous in preserved specimens but obvious in living or recently prepared specimens. C: State 2, evenly stippled gray (infraguttatus, AMNH 104846). Note that the gularchest markings (character 58) of infraguttatus do not interfere with the even stippling of the throat. D: State 3, pale with dark spots (''nubicola-spC'', MHNUC 321). E: State 4, solid dark (inguinalis, LACM 42329). F: State 5, dark with discrete pale spotting/reticulation/marbling (tricolor, USNM 286082).
Fig. 48. Character 63, male abdomen color. A in PHYLOGENETIC SYSTEMATICS OF DART-POISON FROGS AND THEIR RELATIVES (AMPHIBIA: ATHESPHATANURA: DENDROBATIDAE)
Fig. 48. Character 63, male abdomen color. A: State 0, pale, free or almost free of melanophores (''Neblina species'', AMNH 118689). B: State 1, pale with discrete dark spotting/reticulation/marbling (quinquevittatus, AMNH 124069). C: State 2, evenly stippled (talamancae, AMNH 113893). D: State 3, dark with discrete pale spotting/reticulation/marbling (infraguttatus, AMNH 104846). E: State 4, irregular (clumped) stippling or faint,
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.