Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
1,133
datasets available to search
ShareScore release 0.9.0
Dataset results
1,133 results for “single-cell analysis”
Single-cell ATAC-seq analysis of human plasma cell differentiation
GEO Series GSE242324. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell transcriptomic analysis of HPV-related multiphenotypic sinonasal carcinoma uncovers MYB-HPV association
GEO Series GSE293187. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptomic Analysis Reveals Neutrophil as Orchestrator during β-Glucan-Induced Trained Immunity in a Teleost Fish
GEO Series GSE195628. Scophthalmus maximus. 8 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomics and single-cell RNA sequencing analysis of long-term cultured human islets in vitro [scRNA-Seq]
GEO Series GSE280984. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics analysis reveals distinct pathophysiology of the primary coenzyme Q10 nephropathy in pediatric SRNS patient
GEO Series GSE270701. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq analysis unveils a prevalent epithelial/mesenchymal hybrid state during mouse organogenesis
GEO Series GSE87038. Mus musculus. 32 samples. Type: Expression profiling by high throughput sequencing.
Single-cell analysis reveals clonal expansions of pro-inflammatory tissue-resident memory Th17 cells in Crohn's disease
GEO Series GSE247264. Homo sapiens. 22 samples. Type: Expression profiling by high throughput sequencing.
Using single-cell RNA-Seq for unbiased analysis of developmental hierarchies (single cell RNA Seq of bone marrow lineage-negative CD117+ CD34+ cells)
GEO Series GSE70243. Mus musculus. 66 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic analysis reveals hepatic stellate cell activation roadmap and myofibroblast origin during liver fibrosis
GEO Series GSE171904. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Optimal-transport analysis of single-cell gene expression identifies developmental trajectories in reprogramming III
GEO Series GSE122653. Mus musculus. 42 samples. Type: Expression profiling by high throughput sequencing.
Integrated single-cell analysis defines the epigenetic basis of castration-resistant prostate luminal cells
GEO Series GSE252511. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Analysis Reveals Cellular Reprogramming in Advanced Colon Cancer Following FOLFOX-Bevacizumab Treatment
GEO Series GSE232525. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptional and functional analysis of human dopamine neurons in 3D fetal ventral midbrain organoid like cultures
GEO Series GSE192405. Homo sapiens. 13 samples. Type: Expression profiling by high throughput sequencing.
Comprehensive analysis of metastatic gastric cancer tumor cells using Single-cell RNA-seq
GEO Series GSE158631. Homo sapiens. 94 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome analysis of cells in mouse hairy melanocytic nevi
GEO Series GSE112722. Mus musculus. 605 samples. Type: Expression profiling by high throughput sequencing.
Single-cell analysis uncovers preserved prostate cancer lineages and universally altered pathways in Matrigel-free patient-derived organoids
GEO Series GSE305752. Homo sapiens. 17 samples. Type: Expression profiling by high throughput sequencing; Third-party reanalysis.
Single-cell multi-omic analysis of the vestibular schwannoma ecosystem uncovers a nerve injury-like state [RNA-seq-invitro]
GEO Series GSE236735. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell eQTL analysis identifies genetic variation underlying metabolic dysfunction-associated steatohepatitis
GEO Series GSE289173. Homo sapiens. 48 samples. Type: Expression profiling by high throughput sequencing.
Single-cell multiomic analysis of thymocyte development reveals drivers of CD4+ T cell and CD8+ T cell lineage commitment
GEO Series GSE186078. Mus musculus. 19 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell analysis of Kaposi’s sarcoma-associated herpesvirus infection in three-dimensional air-liquid interface culture model
GEO Series GSE184257. Homo sapiens. 11 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.