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1,353
datasets available to search
ShareScore release 0.9.0
Dataset results
1,353 results for “single-cell transcriptomics”
Single-cell Sequencing of Microglia following Repopulation Reveals Distinct Clusters and Transcriptomic Signatures in the 3xTg Alzheimer's Disease Model
GEO Series GSE190607. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell analysis of accessible chromatin using scATAC-seq and transcriptome analysis using RNA-seq in human mammary epithelial cells
GEO Series GSE161628. Homo sapiens. 306 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Single-cell transcriptomic analysis links non-myelinating Schwann cells to pro-inflammatory response in the lung [bulk RNA-Seq]
GEO Series GSE235905. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptome Analysis Reveals Estrogen Signaling Coordinately Augments One-Carbon, Polyamine, and Purine Synthesis in Breast Cancer
GEO Series GSE107864. Homo sapiens. 189 samples. Type: Expression profiling by high throughput sequencing.
High throughput single-cell whole transcriptome analysis of induced cardiomyocytes during direct cardiac reprogramming [RNA-seq]
GEO Series GSE98567. Mus musculus. 574 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics reveals cellular evolution underlying pleomorphic adenoma recurrence and malignant transformation
GEO Series GSE294254. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Characterization of immature ovarian teratomas through single-cell transcriptome
GEO Series GSE229343. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Increased transcriptome variation and localised DNA methylation changes in oocytes from aged mice revealed by parallel single-cell analysis
GEO Series GSE154370. Mus musculus. 168 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
The single-cell transcriptomic atlas and RORA-mediated 3D epigenomic remodeling in driving corneal epithelial differentiation
GEO Series GSE249150. Homo sapiens. 30 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Single-cell CRISPRi transcriptome screening focusing on a subset of lncRNAs regulated by hypoxia
GEO Series GSE249597. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome profiling of the vaginal wall in women with severe anterior vaginal prolapse
GEO Series GSE151202. Homo sapiens. 36 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic comparison of young and aged choroid at the bulk and single-cell levels (bulk)
GEO Series GSE149099. Homo sapiens. 17 samples. Type: Expression profiling by high throughput sequencing.
Asynchronous female reproductive organ ageing as revealed by single-cell transcriptomic atlas
GEO Series GSE241318. Mus musculus. 21 samples. Type: Expression profiling by high throughput sequencing.
Temporal evolution of single-cell transcriptomes of Drosophila olfactory projection neurons
GEO Series GSE161228. Drosophila melanogaster. 11509 samples. Type: Expression profiling by high throughput sequencing.
Dynamics of phage-host interactions in Bacteroides fragilis resolved by single-cell transcriptomics [bulk RNA-Seq data]
GEO Series GSE318809. Bacteroides fragilis. 6 samples. Type: Expression profiling by high throughput sequencing.
A single-cell transcriptomic analysis of cranial neural crest development reveals timing of lineage decisions and novel regulators
GEO Series GSE168179. Danio rerio. 13 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptomics of Human Substantia Nigra in Parkinson's Disease
GEO Series GSE184950. Homo sapiens. 34 samples. Type: Expression profiling by high throughput sequencing.
A single-cell transcriptomic atlas of inner ear morphogenesis in zebrafish
GEO Series GSE309286. Danio rerio. 3 samples. Type: Expression profiling by high throughput sequencing.
STAMP: Single-Cell Transcriptomics Analysis and Multimodal Profiling through Imaging [scRNA-seq]
GEO Series GSE301542. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
The single-cell transcriptomic atlas and RORA-mediated 3D epigenomic remodeling in driving corneal epithelial differentiation [RNA-Seq]
GEO Series GSE248926. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.