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1,017
datasets available to search
ShareScore release 0.9.0
Dataset results
1,017 results for “antimicrobial”
Transcriptome response of Pseudomonas aeruginosa PA14 to antimicrobial peptides
GEO Series GSE139257. Pseudomonas aeruginosa PA14. 12 samples. Type: Expression profiling by high throughput sequencing.
plp2 botrytis cinerea 2-Functional analysis of lipid acyl hydrolases in Arabidopsis antimicrobial defense
GEO Series GSE15881. Arabidopsis thaliana. 8 samples. Type: Expression profiling by array.
af13_plp2 - plp2 paraquat - Functional analysis of lipid acyl hydrolases in Arabidopsis antimicrobial defense
GEO Series GSE15882. Arabidopsis thaliana. 12 samples. Type: Expression profiling by array.
Effect of antimicrobial peptide PR-39 on the gene expression of porcine intestinal epithelial cell line (IPEC-J2)
GEO Series GSE58876. Sus scrofa. 6 samples. Type: Expression profiling by array.
Intestinal Tuft-2 cells exert antimicrobial immunity via sensing bacterial metabolite N-undecanoylglycine by vomeronasal receptor Vmn2r26
GEO Series GSE184675. Mus musculus. 3 samples. Type: Expression profiling by array.
The deubiquitinase OTUD4 inhibits the expression of antimicrobial peptides in Paneth cells to support intestinal inflammation and bacterial infection
GEO Series GSE222836. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Chicory – a functional food with multiple effects: cancer-prevention, antimicrobial resistance, glycemia and lipidemia regulation
GEO Series GSE150218. Mus musculus. 30 samples. Type: Expression profiling by array.
Functional analysis of lipid acyl hydrolases in Arabidopsis antimicrobial defense: plp2 Botrytis cinerea
GEO Series GSE15972. Arabidopsis thaliana. 8 samples. Type: Expression profiling by array.
Transcriptional response of Scots pine trees to Heterobasidion annosum infection: analyses of antimicrobial protein Sp-AMP2
GEO Series GSE87881. Pinus sylvestris. 6 samples. Type: Expression profiling by array.
Antimicrobial susceptibility testing SENTRY site 136 2008-2018
<p>Minimum inhibitory concentrations (MIC) for bacterial isolates submitted by SENTRY site 136 between 2008 and 2018. Bacterial organisms include Staphylococcus aureus, Escherichia coli, Pseudomonas aeruginosa and others. Total isolates = 5259. Total antimicrobial agents tested = 68.</p>
Dataset for the study "Antimicrobial susceptibility testing reveals reduced susceptibility to azithromycin and other antibiotics in Legionella pneumophila serogroup 1 isolates from Portugal"
<p>Dataset for the study "Antimicrobial susceptibility testing reveals reduced susceptibility to azithromycin and other antibiotics in <em>Legionella pneumophila</em> serogroup 1 isolates from Portugal"</p>
Database of antimicrobial resistant bacterial taxa for supervised machine learning
<p>It is a database of antimicrobial resistant bacterial taxa for supervised machine learning.</p>
LiaR-dependent gene expression contributes to antimicrobial responses in group A Streptococcus [RNA-seq]
GEO Series GSE268863. Streptococcus pyogenes. 9 samples. Type: Expression profiling by high throughput sequencing.
LiaR-dependent gene expression contributes to antimicrobial responses in group A Streptococcus [ChIP-seq]
GEO Series GSE268862. Streptococcus pyogenes. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Supplementary material for the thesis "Antimicrobial resistance in companion animals and their home environments - A One Health perspective"
<p><strong>Supplementary files for Paper II: Transmission of methicillin-resistant Staphylococcus spp from infected dogs to the home environment and owners</strong></p> <ul> <li>Table S1 Summary all isolates.xlsx</li> <li>Table S2 Virulence genes MRSP, MRSE, MSSP.xlsx</li> <li>Table S3 Metadata households.docx</li> <li>Table S4 DB virulence genes S. epidermidis.xlsx</li> </ul> <p><strong>Supplementary files for Paper III: The home environment is a reservoir for methicillin-resistant coagulase-negative staphylococci and mammaliicocci</strong></p> <ul> <li>Table_S1_Data_sequenced_isolates.xlsx</li> <li>Table_S2_Virulence_matrix.xlsx</li> </ul>
Bacteria-Specific Features Selection for Enhanced Antimicrobial Peptide Activity Predictions Using Machine-Learning Methods
<p>We developed a new computational approach that allowed us to train several supervised machine-learning models using a specific set of data associated with peptides targeting E. coli bacteria. LASSO regression and Support Vector Machine techniques have been utilized to select, among more than 1500 physio-chemical descriptors, the most important features that can be used to classify a peptide as antimicrobial or ineffective against E. coli. We then performed the classification of active versus inactive AMPs using the Support Vector classifiers, Logistic Regression, and Random Forest methods. This computational study allows us to make recommendations of how to design more efficient anti-bacterial drug therapies.</p>
Antimicrobial defence mechanisms of Heliothis subflexa
<p>Master project data on the antimicrobial defence mechanisms of <em>Heliothis subflexa.</em></p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.