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FIGURE 7 in A novel application of the white light/fringe projection duo: recovering high precision three-dimensional images from fossils for the digital preservation of morphology
FIGURE 7. Examples of analyses that can be performed with the obtained data from the fossils: 1) denoting the relief (emboss filter), 2) detecting edges and transitions (sobel filter), 3) study of the roughness and waviness of a sample (topography filter).
FIGURE 2 in A novel application of the white light/fringe projection duo: recovering high precision three-dimensional images from fossils for the digital preservation of morphology
FIGURE 2. Flowchart of the 'OTY' procedure employed in this study, where: α = angle (60º in this case), * = MBE algorithm (Gutiérrez-García et al., 2013), and ** = Goldstein algorithm. OTY: name given to the white light system together with the phase shifting algorithm filter, based on the fact that it was developed for use on Ototylomys samples (see main text).
FIGURE 6. Full 3-D in A novel application of the white light/fringe projection duo: recovering high precision three-dimensional images from fossils for the digital preservation of morphology
FIGURE 6. Full 3-D image of the reconstructed fossil after merging all the six views. 1) Cloud of points, 2) Final mesh.
FIGURE 4 in A novel application of the white light/fringe projection duo: recovering high precision three-dimensional images from fossils for the digital preservation of morphology
FIGURE 4. Process applied to recover the topography of the fossil sample. Where: 1) image captured by the CCD of the fringe projection on the sample, 2) wrapped phase obtained of the 8 frames after applying the MBE filter, 3) unwrapped phase map, 4) phase carrier compensation, and 5) surface of one of the views of the fossil recovered.
MANET: uncertainty in demographics – data on population projections
<p>This is a repository of global and regional human population data collected from: the databases of scenarios assessed by the Intergovernmental Panel on Climate Change (Sixth Assessment Report, Special Report on 1.5 C; Fifth Assessment Report), multi-national databases of population projections (World Bank, International Database, United Nation population projections), and other very long-term population projections (Resources for the Future).</p> <p>More specifically, it contains:</p> <p>- in `other_pop_data` folder files from <a href="https://databank.worldbank.org/source/population-estimates-and-projections">World Bank,</a> the <a href="https://www.census.gov/data-tools/demo/idb/#/dashboard?COUNTRY_YEAR=2023&COUNTRY_YR_ANIM=2023">International Database</a> from the US Census, and from <a href="https://ghdx.healthdata.org/record/ihme-data/global-population-forecasts-2017-2100">IHME</a></p> <p>- in the `SSP` folder, the Shared Socioeconomic Pathways, as in the version 2.0 downloaded from <a href="https://tntcat.iiasa.ac.at/SspDb/dsd?Action=htmlpage&page=10">IIASA</a> and as in the version 3.0 downloaded from <a href="https://data.ece.iiasa.ac.at/ssp/#/workspaces">IIASA workspace</a></p> <p>- in the `UN` folder, the demographic projections from <a href="https://population.un.org/wpp/Download/Standard/Population/">UN</a></p> <p>- `IAMstat.xlsx`, an overview file of the metadata accompanying the scenarios present in the IPCC databases</p> <p>- `RFF.csv`, an overview file containing the population projections obtained by <a href="../record/6016583#.Y42iFuzP2rP">Resources For the Future</a> </p> <p>'- the remaining `.csv` files with names `AR6#`, `AR5#`, `IAMC15#` contain the IPCC scenarios assessed by the IPCC for preparing the IPCC assessment reports. They can be downloaded from <a href="https://tntcat.iiasa.ac.at/AR5DB">AR5</a>, <a href="https://data.ene.iiasa.ac.at/iamc-1.5c-explorer/#/downloads">SR 1.5</a>, and <a href="https://data.ene.iiasa.ac.at/ar6/#/workspaces">AR6</a></p> <p>This data in intended to be downloaded for use together with the package downloadable <a href="https://github.com/sgiarols/Climate_Scenario_Data_Science">here</a>.</p> <p>The dataset was used as a supporting material for the paper "Underestimating demographic uncertainties in the synthesis process of the IPCC" accepted on npj Climate Action (DOI : 10.1038/s44168-024-00152-y).</p>
FIGURE 3 in Ichthyofauna on the move: fish colonization and spread through the São Francisco Interbasin Water Transfer Project
FIGURE 3 | Canonical analysis of principal coordinates (CAP) for the species and sites that contributed to the differences between basins and reservoirs (SF = São Francisco River basin, PB = Paraíba do Norte River basin, EAR = East Axis Reservoirs). Fitted site scores are colored and shaped according to the basin or EAR designation. A subset of species that explain at least 70% of the variation among sites is represented by species name abbreviation (two first letters of genus and the two first of the epithet). The only predictor significant for the linear model was richness.
FIGURE 2 in Ichthyofauna on the move: fish colonization and spread through the São Francisco Interbasin Water Transfer Project
FIGURE 2 | Seriated ordination of the species presence/ absence at the sampling sites of the East Axis of the São Francisco River Integration Project (SF-IWT). Black cells represent the presence of the species at a particular location. The species written in bold represents the new occurrence record in the receiving basin. In the upper right corner, Venn diagram showing species richness interactions between groups of sites. SF = São Francisco River basin, PB = Paraíba do Norte River basin, EAR = East Axis Reservoirs.
FIGURE 5 in Ichthyofauna on the move: fish colonization and spread through the São Francisco Interbasin Water Transfer Project
FIGURE 5 | Spatial distribution of Anchoviella vaillanti. The size of the circles represents juveniles/adults' abundance at each sampling site. The species went from the Sao Francisco donor basin through the SF-IWT East Axis artificial canals and reservoirs, reaching the receiving Paraíba do Norte basin sites, in the states of Pernambuco (PE) and Paraíba (PB), Brazil. DB = Donor basin, EAR = East Axis Reservoirs, RB = Receiving basin. Detailed location list of the sampling sites in Tab. S1.
FIGURE 1 in Ichthyofauna on the move: fish colonization and spread through the São Francisco Interbasin Water Transfer Project
FIGURE 1 | Schematic representation containing the monitored sites along the East Axis of the São Francisco River Integration Project (SFIWT) and the exact location of the new records of Anchoviella vaillanti in the Poções and Epitácio Pessoa Reservoirs. DB = Donor basin, EAR = East Axis Reservoirs, RB = Receiving basin. Detailed location list of the sampling sites in Tab. S1.
FIGURE 4 in Ichthyofauna on the move: fish colonization and spread through the São Francisco Interbasin Water Transfer Project
FIGURE 4 | Variation in the abundance of non-native species Anchoviella vaillanti and Moenkhausia costae in the Poções Reservoir (RB 1) in the campaigns conducted after the arrival of the SF-IWT waters.
Denmark's Not-So-Oldest Sheep: An Update on Domestic Animals from the Femern Project
<p>Sheep and goats are often considered to be the oldest livestock animals in Denmark. In this contribution, we present the results of ZooMS measurements from seven ovicaprid bones from the Femern project, an excavation in the area of the former Syltholm Fjord (Lolland, Denmark). The bones were morphologically identified as sheep or goats and represented the oldest dated remains of both species in Denmark. However, the ZooMS analysis showed that more than half of the morphological identifications were incorrect. For the other samples, we refined the identifications. Hence, our study confirms that indications of sheep and goat husbandry based on bone morphology alone should be treated with caution. The probability of misidentification in our case was high, even in the case of well-preserved bones.</p>
GENEActiv accelerometer files collected during the project entitled "Cultures et comportements alimentaires de la jeunesse dans les pays francophones du Pacifique au XXIème siècle: exemple de la Nouvelle-Calédonie" [Eng: "Eating cultures and behaviors of young people in French-speaking Pacific countries in the 21st century: the example of New Caledonia"] (anonymized version - first part)
<p><a title="GENEActiv" href="https://activinsights.com/technology/geneactiv/" target="_blank" rel="noopener">GENEActiv</a> accelerometer .csv files converted with a 1 second epoch from raw GENEActiv .bin files recorded during the project entitled "<strong>Cultures et comportements alimentaires de la jeunesse dans les pays francophones du Pacifique au XXIème siècle: exemple de la Nouvelle-Calédonie</strong>" [en: "<strong>Eating cultures and behaviors of young people in French-speaking Pacific countries in the 21st century: the example of New Caledonia</strong>"]. Devices are 60-Hz triaxial accelerometers.</p> <p>This dataset also contains <strong>participantCharacteristics.csv</strong> that povides basic information about participants and <strong>read_a_binFile_share.R</strong> that is a short R code aiming at converting and saving accelerometer data from .bin files in 1 second epoch .csv files (consider the Methods section).</p> <p>Participant characteristics: 10 to 16 years old students and some parents.</p> <p>Number of participants: 231 (206 adolescents + 25 adults).</p> <p>Year of the study: 2018 - 2019.</p> <p>Place of the study: New Caledonia.</p> <p>The accelerometer .csv files with a 1 second epoch and extracted from raw .bin files are available in open datasets:</p> <ul> <li><a title="Open dataset - first part" href="https://doi.org/10.5281/zenodo.12615468" target="_blank" rel="noopener">anonymized version - first part</a></li> <li><a title="Open dataset - second part" href="https://doi.org/10.5281/zenodo.12638746" target="_blank" rel="noopener">anonymized version - second part</a></li> <li><a title="Open dataset - third part" href="https://doi.org/10.5281/zenodo.12682660" target="_blank" rel="noopener">anonymized version - third part</a></li> </ul> <p>The accelerometer raw .bin files are available in <strong>restricted datasets</strong>:</p> <ul> <li><a title="Restricted dataset - first part" href="https://doi.org/10.5281/zenodo.11594645" target="_blank" rel="noopener">non-anonymized version - first part</a></li> <li><a title="Restricted dataset - second part" href="https://doi.org/10.5281/zenodo.12638965" target="_blank" rel="noopener">non-anonymized version - second part</a></li> <li><a title="Restricted dataset - third part" href="https://doi.org/10.5281/zenodo.12661429" target="_blank" rel="noopener">non-anonymized version - third part</a></li> </ul> <p>Other participant characteristics (age, place of living, cultural community and socio-economic status) are available in a <a title="Information associated with GENEActiv accelerometer files collected during the project entitled "Cultures et comportements alimentaires de la jeunesse dans les pays francophones du Pacifique au XXIème siècle: exemple de la Nouvelle-Calédonie" [en: "Eating cultures and behaviors of young people in French-speaking Pacific countries in the 21st century: the example of New Caledonia"] (non-anonymized information version)" href="https://doi.org/10.5281/zenodo.12195186" target="_blank" rel="noopener">restricted non-anonymized dataset</a>.</p> <p>When using this dataset, please cite the following reference:<br><a title="Wattelez et al. 2025" href="https://doi.org/10.1016/j.dib.2024.111228" target="_blank" rel="noopener">G. Wattelez, S. Frayon, O. Galy, Assessing physical activity/behavior of adolescents living in the Pacific with accelerometer data: 231 GENEActiv records in New Caledonia, Data in Brief 58 (2025) 111228, doi: 10.1016/j.dib.2024.111228</a></p>
MSCA SHINE_Project: Numerical results of the soldification-melting of a Si-based alloy (Ultra-high temperature storage)
<p>Project 101145914 — SHINE has received funding withing the MSCA framework. The purpose of this project is to construct a generic model describing the solidification-melting process of ultra-high temperature latent heat thermal energy storage systems based on data-driven analysis and rigorous CFD models. Within the initial steps of the project a preliminary database is being created based on available results from previous UPM’s projects (Thermobat Project) as well as preliminary simulations by using a 2D CFD model. The present dataset contains information of FeSiB alloy solidification-melting close to 1250 oC inside a cylindrical container, under various heating conditions. Analysis of the present data can be also found in the manuscript entitled as ¨Numerical analysis on the state of charge of an ultra-high temperature latent heat energy storage system, SoraPaces, Rome, 2024¨</p>
DS.10.04 | HERCCULES project at POLIMI - Department of Energy and School of Design (June 3rd to 7th, 2024)
<p><em>From June 3rd to 7th, 2024, Manuele Gatti, Lia Tagliavini, Matteo Romano and Riccardo Cremona from POLIMI Department of Energy organized and delivered a didactic workshop together with Sabrina Scuri, Valeria Bucchetti and Marco Quaggiotto from POLIMI School of Design and with Martina Fantini (EUCORE). </em></p> <p><em>The aim was to provide knowledge on CCUS to the students from the POLIMI School of Design for them to develop and create in 5 working days multimedial CCUS content within the framework of an academic course (BSc, 3rd year), as well as to test their perception about CCUS before and after the workshop.</em></p> <p><em>9 groups have been formed, involving 44 students in total, each providing different contents (slides, infographic, videos, and game) under the assistance of the teachers.</em></p> <p><em> On June 7th, 2024, students presented their final works and 3 outstanding groups have been awarded with a grant.</em></p>
Araneae families in pitfall traps in sub project 7 in KiLi project
<p>Spiders were identified and sorted at least to family level by Dr. Steffen Bayer, Senckenberg Research Institute, Frankfurt a.M., Germany. Spider samples were pitfall trap samples from the sampling rounds 2, 3, 4, and 6.</p> <p>We sampled arthropod assemblages in disturbed and undisturbed vegetation types along an elevational gradient of 860–4550 m asl on the southern slopes of Mt. Kilimanjaro, Tanzania. On each site, ten pitfall traps were evenly spaced along two 50 m transects, with a distance of 10 m between individual traps and 20 m between transects. Pitfall traps were filled with 100–200 ml of a mixture of ethylene glycol and water (1:1 vol/vol) with a drop of liquid soap to break surface tension. Traps were exposed for 7 days each during two to five sampling events in both the dry and wet seasons between May 2011 and October 2012. As the number of individuals collected in ten traps was very high, we had to confine the sorting and subsequent analysis to sub-sets of at least three traps per sampling site and sampling event. Unfortunately, we had to find out later that the ethylen glycol procured locally was actually a mixture of ethylen glycol and 2-ethoxyethanol, which is a strong oxidizing chemical. Therefore, any sequencing of specimen caught in pitfall traps was impossible.</p> <p>Haas, Michael. 2014. Master thesis. The influence of elevation on community composition and trophic position of spiders. University of Marburg</p> <p>The KiLi project (2010-2018) is a German Science Foundation (DFG) funded research unit (DFG research unit FOR1246) that focuses on biodiversity and ecosystem processes along altitudinal and disturbance gradients on Mt. Kilimanjaro (Tanzania, Africa), capitalizing on its world-wide unique range of climatic and vegetation zones. The research unit comprises 2 central projects and 7 subprojects from various disciplines. On a total of 60 study sites in both natural and human-disturbed ecosystems biodiversity (e.g. plants, soil arthropods, ants, bees, frogs, lizards, bats, birds), related ecosystem processes (decomposition, seed dispersal, pollination, herbivory, predation), and biogeochemical processes and properties of ecosystems (climate, soil properties and nutrient status, regulation of water and carbon fluxes, trace gas emissions, primary productivity, functional diversity) are analyzed.</p>
Coleoptera morphospecies with feeding guild (at family level) in sub project 7 in KiLi project
<p>Coleoptera morphospecies with feeding guild (at family level). </p> <p>Assemblages of ground-dwelling beetles were sampled with pitfall traps8. Ten pitfall traps were evenly spaced along two 50 m transects, with a distance of 10 m between individual traps and 20 m between transects. Pitfall traps were filled with 100-200 ml solution of equal parts of ethylenglycol and water with a drop of liquid soap to break the surface tension. The traps were placed on the sampling sites in June 2012 and collected after seven days. As the number of individuals collected in ten traps was very high and all individuals could not be analyzed in time, for the present analysis, we processed only three traps from each study site. Ground-dwelling beetles were sorted to morphospecies level, and where possible, to species.</p> <p>The KiLi project (2010-2018) is a German Science Foundation (DFG) funded research unit (DFG research unit FOR1246) that focuses on biodiversity and ecosystem processes along altitudinal and disturbance gradients on Mt. Kilimanjaro (Tanzania, Africa), capitalizing on its world-wide unique range of climatic and vegetation zones. The research unit comprises 2 central projects and 7 subprojects from various disciplines. On a total of 60 study sites in both natural and human-disturbed ecosystems biodiversity (e.g. plants, soil arthropods, ants, bees, frogs, lizards, bats, birds), related ecosystem processes (decomposition, seed dispersal, pollination, herbivory, predation), and biogeochemical processes and properties of ecosystems (climate, soil properties and nutrient status, regulation of water and carbon fluxes, trace gas emissions, primary productivity, functional diversity) are analyzed.</p>
Compilation of data collected in surveys on the WissKI-based 3D Repository with DFG 3D-Viewer project partners and architecture students from the Warsaw University of Technology and the Technical University of Łódź
<p>The dataset contain the compiliation of responses from users of WissKI-based 3D Repository (https://3d-repository.hs-mainz.de/)., which is the open platform for deposit of 3D models of cultural heritage. The beta version of the WissKI 3D Repository, initiated in June 2022, has been subjected to evaluation by two primary target groups since its launch. The initial group, composed of students in the cultural heritage domain, was tasked with showcasing the importance of documenting and publishing 3D models of digital reconstructions. The survey with sutdents was conducted for three different classes: </p> <p>1) In summer 2022 with bachelor architectrue students at Warsaw University of Technology during seminar of choice regarding digital reconstruction of wooden synagogues;</p> <p>2) In summer 2023 with bachelor architectrue students at Warsaw University of Technology, and master students from Technology University of Łódź during seminar of choice regarding digital reconstruction of wooden synagogues;</p> <p>3) In autumn 2023 during international workshop about digital 3D heritage of CoVHer project with studnets of architecture from Warsaw Univeristy of Technology, Alma Mater Studiorum – Universita di Bologna, Facoltà di Architettura di Porto and Hochschule Mainz - University of Applied Sciences, as well as archaeology studnets from Universitat Autònoma de Barcelona.</p> <p>The second group, comprising digital 3D cultural heritage professionals, predominantly focused on archiving digital assets. Participants were project partners of DFG 3D Viewer project, which were professionals from the Institute of Archaeology at University Cologne, the Institute of Art History at the Ludwig-Maximilians-Universität Munich, the Architecture, Civil Engineering and Urban Planning Department of BTU Cottbus Senftenberg, and the Detushce Museum. They were asked for evaluaton of system after three differetn stages of work: at the begging wihtout any introduction to the system, after proivision of intorudctionary materilas and finally at the end of work.</p> <p>All participants were requested to report their experiences across four categories: metadata form, 3D viewer, provided guidelines, and overall experience. A 5-point rating scale was employed to assess specific issues, with 1 being the most negative and 5 being the most positive. The form length question was an exception, where a median value of 3 was considered ideal, and extreme values indicated either excessive length or brevity.</p>
Cohen AG Hons Thesis Project Dataset and RStudio Codes
<div>The attached codes were written by AG Cohen to analyse the attached data obtained from an experimental taphonomy experiment conducted at the Australian Facility for Taphonomic Experimental Research (AFTER). Six human donors were buried on the left side in flexion. Four donors were buried in a fresh state and two donors were naturally mummified by desiccation prior to burial. The donors were excavated after ~5 to 7 years of burial.</div> <div>The project aimed to explore the correlation between joint flexion and mode of deposition, testing the hypothesis proposed by archaeothanatological scholars that hyperflexion is only achievable in multistage depositions, such as those in which mummification precedes interment, permitting a tighter closure of flexor surfaces than would be achievable in life with the obstruction of soft-tissues.</div> <div> </div> <div>The main aim was to determine if there was any post-burial movement of the lower limbs and a statistically significant difference in flexion angles between the 'mummy' and ‘fresh’ experiment groups. It also provided new insights by comparing the reliability of 2D and 3D methods in measuring joint angles from the skeletal remains and established by what parameters we can define hyperflexion. The data and codes are used to explore this correlation, the agreement between 2D and 3D methods, and the consistency of the measurement methods when performed by one rater (repeats) and multiple beta-testers.</div>
Enhancing Motivation in Software Engineering Education through Gamified Agile Project-based Learning
<p>Project-based learning (PBL), e.g., student software development projects, is an essential part of today's Software Engineering (SE) education. They allow students to work on real-world projects and gain practical experience as a team. However, several challenges arise in such projects, including learning new technologies and dealing with communication and coordination issues within the team. These factors can lead to a lack of motivation to contribute to the project and a decrease in productivity, potentially resulting in an insufficient project outcome. This paper aims to promote student motivation in PBL and increase team productivity by applying gamification. We conducted a user and requirements analysis to identify the needs of students and supervisors of such projects. Based on the insights, we designed and implemented DinoDev, a gamified project management tool that combines project management features with gamification elements. The DinoDev concept was evaluated in a student project, indicating increased motivation and team productivity. The findings are valuable for advancing research on using gamification in PBL and for lecturers to improve their students' motivation and team productivity in SE education.</p>
Supplementary data to the African Yam Bean Whole Genome Sequencing Project ENA Project_ID:PRJEB57813
<p>The first chromosome-scale assembly of the African yam bean, Sphenostylis stenocarpa (Hochst. ex. A. Rich.) Harms, an original African tuberous legume producing both pods and protein-rich tubers.</p> <p>ENA Project_ID: <strong>PRJEB57813</strong></p> <p>Genome Assembly Accession: <strong>GCA_963425845</strong></p>
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.