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10,119 results for “IT Support”
Supporting information for "Underscreening in concentrated electrolytes: Polyelectrolyte brushes exhibit re-entrant swelling behaviour"
<p>This deposition contains the data and analysis (Jupyter notebooks) detailed in "Underscreening in concentrated electrolytes: Polyelectrolyte brushes exhibit re-entrant swelling behaviour". All Jupyter notebooks have also been converted into PDF files for ease of viewing. </p> <p>All data and code (notebooks) required to reproduce the analysis can be found within the “supporting_data.zip” archive. This archive contains three sub-directories: </p> <p><strong>Spectroscopic_ellipsometry</strong> </p> <ul> <li> <p>Data directory (data_files) containing all raw ellipsometry data. </p> </li> <li> <p>“PMETAC_wet_analysis.ipynb” notebooks to reproduce the analysis of a hydrated (solid-liquid) polymer brush. Further relevant plotting tools can be found in the <a href="https://github.com/refnx/refellips">refellips</a> repo. </p> </li> <li> <p>“PMETAC_dry.ipynb” notebook to reproduce the analysis of the dry polymer film and create the areal maps. </p> </li> </ul> <p><strong>Neutron_reflectometry</strong> </p> <ul> <li> <p>Data directory (NamedData) containing all relevant reduced reflectivity profiles from the Platypus reflectometry at ANSTO. </p> </li> <li> <p>“NR_dry.ipynb”, “NR_Solid-Liquid.ipynb” notebooks required to reproduce the analysis pertaining to a dry polymer brush and a solvated brush, respectively. </p> </li> <li> <p>“NR_Solid-Liquid_corefine.ipynb” notebook for reproducing the simultaneous optimisation of the PMETAC brush in D2O and H2O: co-refinement. </p> </li> <li> <p>Additional code required to model the hydrated polymer brush and various plotting tools can be found in the <a href="https://github.com/igresh/refnxtoolbox">refnxtoolbox</a> repo and the <a href="https://github.com/refnx/refnx">refnx</a> repo. </p> </li> </ul> <p><strong>nSCFT </strong></p> <ul> <li> <p>Files containing the polymer, ion, and solvent VF profiles from nSCFT calculations. </p> </li> </ul> <p> </p>
Supporting dataset for tertiary study on source code metrics
<p>The dataset includes search results (SearchResultsFromScopusIEEEACM June23.xlsx) and compiled results from the included secondary studies (Extracted Data For Tertiary Study June23 15 SS.xlsx). </p> <p>Search results description: Please use Figure 1 from paper to trace the data made available. The excel file contains the following data</p> <p>1) validation set of studies used to quasi-gold standard validation of search string. </p> <p>2) known set of papers used to formulate the search string</p> <p>3) search results from databased Scopus, IEEE, and ACM</p> <p>4) secondary studies from tertiary study on code smells by Lacerda et al.</p> <p>5) Combined results from all sources</p> <p>6) papers removed after duplicates removal</p> <p>7) Preliminary search results</p> <p>8) Search Strings used for Scopus, IEEE, ACM</p> <p>Extracted Data Description: Extracted data contains the following:</p> <p>1) meta data and characteristics of secondary studies (title, author, year of publication)</p> <p>2) Raw data on evidence on maintainability, reliability and security from included set of studies</p> <p>3) compiled data on evidence on maintainability, reliability and security from included set of studies </p> <p>4) Description of prediction models used</p> <p>5) Description of source code metrics</p> <p>6) Secondary studies that used metrics but reported no evidence and secondary studies removed due to low DARE score</p> <p>7) Quality assessment score of included secondary studies</p> <p>8) Quality assessment questions for (additional quality assessment score)AQAS</p> <p> </p> <p> </p>
Supporting data for the publication "Emission ensemble approach to improve the development of multi-scale emission inventories"
<p>This dataset includes the source IDL code as well as the three emission inventory aggregated emission datasets necessary to perform the analysis presented in the publication: "Emission ensemble approach to improve the development of multi-scale emission inventories (GMD)"</p>
Supporting data for: Topographic information improves simulated patterns of post-fire conifer regeneration in the Southwest U.S.
<p>The western U.S. is projected to experience more frequent and severe wildfires in the future due to drier and hotter climate conditions, exacerbating destructive wildfire impacts on forest ecosystems such as tree mortality and unsuccessful post-fire regeneration. While empirical studies have revealed strong relationships between topographical information and plant regeneration, ecological processes in ecosystem models have either not fully addressed topography-mediated effects on the probability of plant regeneration, or the probability is only controlled by climate-related factors, e.g., water and light stresses. In this study, we incorporated seedling survival data based on a planting experiment in the footprint of the 2011 Las Conchas Fire into the PnET extension of the LANDIS-II model by adding topographic and an additional climatic variable to the probability of regeneration. The modified algorithm included topographic parameters such as heat load index (HLI) and ground slope and spring precipitation. We ran simulations on the Las Conchas Fire landscape for 2012–2099 using observed and projected climate data (i.e., RCP 4.5 and 8.5). Our modification significantly reduced the number of regeneration events of three common southwestern conifer tree species (piñon, ponderosa pine and Douglas-fir), leading to decreases in aboveground biomass, regardless of climate scenario. The modified algorithm decreased regeneration at higher elevations and increased regeneration at lower elevations relative to the original algorithm. Regenerations of three species also decreased on eastern aspects. Our findings suggest that ecosystem models may overestimate post-fire regeneration events in the southwest U.S. To better represent regeneration processes following wildfire, ecosystem models need refinement to better account for the range of factors that influence tree seedling establishment. This will improve model utility for projecting the combined effects of climate and wildfire on tree species distributions.</p>
Supporting data and tool, for the paper "A standardized methodology for the validation of air quality forecast applications (F-MQO): Lessons learnt from its application across Europe"
<p>This 'Zenodo' contains supporting data and tools, for the paper 'A standardized methodology for the validation of air quality forecast applications (F-MQO): Lessons learnt from its application across Europe'.</p> <p>The repository includes the source code (<a href="https://zenodo.org/api/files/fdcaf2a5-5289-44f5-96db-6dda29c5cb6c/DELTA_7.2.zip">DELTA_7.2.zip</a>) and the dataset (<a href="https://zenodo.org/api/files/fdcaf2a5-5289-44f5-96db-6dda29c5cb6c/GMD_Vitali_et_all_data_20230516.zip">GMD_Vitali_et_all_data_20230516.zip</a>).</p>
Supporting data for "A service to help insurers understand the financial impacts of changing flood risk in Europe, based on PESETA IV"
<p>Supporting data for the paper "A service to help insurers understand the financial impacts of changing flood risk in Europe, based on PESETA IV".</p> <p><a href="https://doi.org/10.1016/j.cliser.2023.100395">https://doi.org/10.1016/j.cliser.2023.100395</a></p>
Reconstitution of phase-separated signaling clusters and actin polymerization on supported lipid bilayers
<p>Liquid–liquid phase separation driven by weak interactions between multivalent molecules contributes to the cellular organization by promoting the formation of biomolecular condensates. At membranes, phase separation can promote the assembly of transmembrane proteins with their cytoplasmic binding partners into micron-sized membrane-associated condensates. For example, phase separation promotes clustering of nephrin, a transmembrane adhesion molecule, resulting in increased Arp2/3 complex-dependent actin polymerization. In vitro reconstitution is a powerful approach to understanding phase separation in biological systems. With a bottom-up approach, we can determine the molecules necessary and sufficient for phase separation, map the phase diagram by quantifying de-mixing over a range of molecular concentrations, assess the material properties of the condensed phase using fluorescence recovery after photobleaching (FRAP), and even determine how phase separation impacts downstream biochemical activity. Here, we describe a detailed protocol to reconstitute nephrin clusters on supported lipid bilayers with purified recombinant protein. We also describe how to measure Arp2/3 complex-dependent actin polymerization on bilayers using fluorescence microscopy. These different protocols can be performed independently or combined as needed. These general techniques can be applied to reconstitute and study phase-separated signaling clusters of many different receptors or to generally understand how actin polymerization is regulated at membranes.</p>
Research data supporting: "TimeSOAP: Tracking high-dimensional fluctuations in complex molecular systems via time variations of SOAP spectra"
<p>This repository contains the set of data shown in the paper <strong>"<em>Time</em>SOAP: Tracking high-dimensional fluctuations in complex molecular systems via time variations of SOAP spectra"</strong>, published on The Journal of Chemical Physics (DOI: 10.1063/5.0147025).</p>
Discretized U.S. drought data to support statistical modeling
<p>Drought is a costly and disruptive natural disaster, with widespread implications for agriculture, wildfire, and urban planning. We present a novel data set on US drought built to enable computationally efficient spatio-temporal statistical and probabilistic models of drought. We converted drought data obtained from the widely-used US Drought Monitor (USDM) from continuous shape files to a 0.5-degree regular lattice. These data cover the Continental US from 2000 to mid-2022. Known environmental drivers of drought include those obtained from the North American Land Data Assimilation System (NLDAS-2), US Geological Survey (USGS) streamflow data, and National Oceanic and Atmospheric Administration (NOAA) teleconnections data. The USGS streamflow data is itself a new gridded data product, aggregating point-referenced stream discharges from across the US to a common lattice using watersheds to combine nearby stream data. The resulting data set permits statistical and probabilistic modeling of drought with explicit spatial and/or temporal dependence. Such models could be used to forecast short-range and even season-to-season future droughts with uncertainty, extending the reach and value of the current US Drought Outlook produced by the National Weather Service Climate Prediction Center. </p>
Processed data and scripts supporting the manuscript "Single-cell transcriptomics reveals immune suppression and cell states predictive of patient outcomes in rhabdomyosarcoma"
<p>This submission contains the compiled count table, processed R objects and various scripts and output files accompanying our manuscript "Single-cell transcriptomics reveals immune suppression and cell states predictive of patient outcomes in rhabdomyosarcoma" (Nature Communications, 2023, https://doi.org/10.1038/s41467-023-38886-8)</p>
Supporting data (MEG and fMRI) for brain model
<p>Supporting data (MEG and fMRI) for the brain model published here: https://doi.org/10.5281/zenodo.7988965.</p>
A Conceptual Model to Support Teaching of Software Engineering Controlled (Quasi-)Experiments - Evaluation of the Concept Model
<p>A Conceptual Model to Support Teaching of Software Engineering Controlled (Quasi-)Experiments - Evaluation of the Concept Model</p>
Data from: Narwhal (Monodon monoceros) echolocation click rates to support cue counting passive acoustic density estimation
<p class="MsoNormal"><span>The datasets correspond to the data used to obtain the results shown in the manuscript "Narwhal (<em>Monodon monoceros</em>) echolocation click rates to support cue counting passive acoustic density estimation".</span></p> <p class="MsoNormal"><span>When the manuscript is accepted we will also edit and add here the full reference including the DOI of the publication.</span></p>
Data for "The neglected role of abandoned cropland in supporting both food security and climate change mitigation"
<p><strong>Data for "The neglected role of abandoned cropland in supporting both food security and climate change mitigation"</strong></p> <p><strong>All files will be made publicly accessible before publication.</strong></p> <p>Version: 2.0 (Round 2 revision)</p> <p>Content (spatial resolution, data info)</p> <ol> <li>Abandoned cropland map (10arcsec, 1 raster file)</li> <li>Suitabability of abanonded cropland for reforestation and recultivation (5arcmin, 3 raster files)</li> <li>Food production potential of global abandoned cropland (5arcmin,1 raster file)</li> <li>Climate change mitigation potential of global abandoned cropland (5arcmin, 1 raster file)</li> <li>outcomes of key scenarios <ul> <li>4 key Scenarios: Maximizing food production, Maximizing climate change mitigation, Equal Allocation, Maximizing combined potential</li> <li>Data included in the output of each scenario: <ul> <li>Land allocated for reforestation and recultivation (5arcmin/1arcdeg, 5 raster files)</li> <li>Climate change mitigation potential and food production potential (5arcmin/1arcdeg, 5 raster files)</li> <li>Emission for land clearing (5arcmin, 1 raster)</li> <li>Foregone climate change mitigation potential (5arcmin, 1 raster)</li> <li>Summary table</li> </ul> </li> <li>Summary table for 4 key scenarios</li> </ul> </li> <li>Codes for generating 4 key scenarios</li> </ol>
Supporting Material for "Lunar Surface Model Age Derivation: Comparisons Between Automatic and Human Crater Counting Using LRO-NAC And Kaguya TC Images"
<p>Supporting Material for "Lunar Surface Model Age Derivation: Comparisons Between Automatic and Human Crater Counting Using LRO-NAC And Kaguya TC Images"</p> <p>Contents of this material</p> <ul> <li>Supplemental Text S1 and Text S2.</li> <li>Figures S1, S2, S2, S4, S5.</li> <li>Tables S1, S2</li> </ul> <p>For any questions email JHF (john.h.fairweaher@gmail.com).</p>
FIGURE 1 The Senckenberg model for a streamlined taxonomy workflow involving a in Why is there no service to support taxonomy?
FIGURE 1 The Senckenberg model for a streamlined taxonomy workflow involving a commercial service that covers transferable technical aspects of species descriptions. This figure was designed using icons from Flaticon.com.
Self-Supported Polymeric Ruthenium Complexes as Olefin Metathesis Catalysts in Synthesis of Heterocyclic Compounds
<p>Data confirming the structure of the new compounds obtained within the project, published in <em>Catalysts</em> <strong>2022</strong>, <em>12</em>(10), 1087; <a href="https://doi.org/10.3390/catal12101087">https://doi.org/10.3390/catal12101087</a></p> <p>The research was performed within MAESTRO project and was funded by National Science Centre, Poland, grant number DEC-2019/34/A/ST4/00372.</p>
Elevational differences in migration phenology of Lazuli Buntings do not support selection-based hypotheses for protandry
<p>Documenting and understanding sex-specific variation in migratory phenology is important for predicting avian population dynamics. In spring, males often arrive on the breeding grounds before females (protandry), though whether these patterns result from fitness benefits versus sex-specific constraints on arrival timing remains poorly understood. Sex-specific variation in the timing of fall migration is less well-documented than in spring, in part because documenting fall departures is often limited by cryptic behaviors, lower vocalization rates, and shifting territory boundaries during this time of year. We used two years of high-resolution encounter data from radio-frequency identification (RFID)-equipped bird feeders to monitor the daily presence of male and female Lazuli Buntings (<em>Passerina</em> <em>amoena</em>) throughout the breeding season at a high and a low elevation site in Cache County, Utah, USA. These encounter data were used to estimate daily arrival and departure probabilities and to investigate possible differences in migration timing in relation to sex and elevation. At low elevation, male arrival (n=15) preceded female arrival (n=16) by approximately one week, consistent with previous research that has documented protandry in other migratory songbirds. At high elevation, however, no significant differences were found between male (n=19) and female arrival (n=6). In fall, we found little difference in departure dates between elevation or sex, or between years. Our observations are most consistent with constraint-based hypotheses explaining protandry, possibly relating to sex-specific constraints operating during the non-breeding period. We additionally emphasize the need for quantifying uncertainty in phenological estimates and importance of addressing potential differences across demographic groups. </p>
Figure 2 in Mitochondrial 12S rRNA sequences support the existence of a third species of freshwater blackfish (Percicthyidae: Gadopsis) from south-eastern Australia
Figure 2. Phylogenetic trees, using the PAUP software package (Swofford, 1998). A, Maximum parsimony, using a full exhaustive search with 1000 bootstrap replicates. B, Distance analysis, using the neighbour-joining option, bootstrap replicates set at 1000. C, Maximum likelihood, using the Tamura-Nei model with 100 bootstrap replicates.
Supporting data for "Dissecting the cellular architecture of neuroblastoma bone marrow metastasis using single-cell transcriptomics and epigenomics unravels the role of monocytes at the metastatic niche"
<p>This data repository contains several datasets supplementing the paper “Dissecting the cellular architecture of neuroblastoma bone marrow metastasis using single-cell transcriptomics and epigenomics unravels the role of monocytes at the metastatic niche” by Fetahu, Esser-Skala, Dnyansagar et al. (2023).</p> <ul> <li>HOMER_Results.zip: detailed results of the HOMER analysis</li> <li>nblast_scopen_gene_activity_normalized_motifs_added.rds: Seurat object with scATAC-seq data</li> <li>snp_array.tgz: SNP array data</li> <li>R_data_generated.tgz: Files generated by the scRNA-seq analysis scripts in the GitHub repository associated with the publication.</li> </ul>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.