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3,878 results for “Molecular Data”
FIGURES 1–5 in New species and records of Leuctridae (Plecoptera) from Guangxi, China, on the basis of morphological and molecular data, with emphasis on Rhopalopsole
FIGURES 1–5. Terminalia of Rhopalopsole duyuzhoui Sivec & Harper, 2008, China, Guangxi, Damingshan National Natural Reserve—1: female terminalia, ventral view; 2: female terminalia, lateral view; 3: male epiproct, oblique basodorsal view; 4: same, lateral view; 5: left and central portion of tergum 10 with epiproct, dorsal view—scale 1 mm for Figs. 1–2, 0.5 mm for Figs. 3–5.
FIGURE 22 in New species and records of Leuctridae (Plecoptera) from Guangxi, China, on the basis of morphological and molecular data, with emphasis on Rhopalopsole
FIGURE 22. Maximum likelihood phylogenetic tree of coxI. Branches numbers indicate bootstrap support from maximum likelihood analysis. The scale bar represent the rate of base substitutions. M: male; F: female; Rhopalopsole-spn: R. cestroidea sp. nov.
FIGURE 9. a–c in Integration of molecular, bioacoustical and morphological data reveals two new cryptic species of Pelodytes (Anura, Pelodytidae) from the Iberian Peninsula
FIGURE 9. a–c, Mouthparts of preserved tadpoles of three species of Pelodytes. Note the absence of a central gap in the third anterior labial tooth row in P. ibericus. d, mouthpart, and e, lateral view of a living tadpole of P. ibericus from near Jerez de la Frontera.
FIGURE 6 in Integration of molecular, bioacoustical and morphological data reveals two new cryptic species of Pelodytes (Anura, Pelodytidae) from the Iberian Peninsula
FIGURE 6. Morphometric differentiation among the four western Pelodytes lineages. The upper graph is a scatterplot of first and second principal components from a PCA of raw morphometric values in 117 male specimens of Pelodytes. Note that PC1 corresponds mostly to body size (Table 5). The lower graphs are boxplots of SVL, relative tympanum diameter and relative hindlimb length in male Pelodytes, with median (dot), 25% percentiles (box) and ranges, illustrating the smaller body size of P. atlanticus sp. nov. and P. ibericus, and larger tympanum and shorter limbs of P. ibericus. All specimens of P. ibericus, P. atlanticus, and P. hespericus were measured by JDR, and specimens of P. punctatus were measured by MV.
FIGURE 4 in Integration of molecular, bioacoustical and morphological data reveals two new cryptic species of Pelodytes (Anura, Pelodytidae) from the Iberian Peninsula
FIGURE 4. Species tree calculated from the analysis of DNA sequences of two mitochondrial and six nuclear gene segments (left), after exclusion of admixed/hybrid samples identified from the nDNA networks in Fig. 2 and Bayesian assignment analyses in Fig. 3. The tree on the right shows the same topology as recovered in a species tree analysis based only on the six nuclear gene segments.
FIGURE 1 in Integration of molecular, bioacoustical and morphological data reveals two new cryptic species of Pelodytes (Anura, Pelodytidae) from the Iberian Peninsula
FIGURE 1. Location of 45 populations of Pelodytes sampled for molecular analysis (indicative map unscaled). Colored dots represent the four species described: green, lineage A (P. atlanticus sp. nov.); orange, lineage B (P. ibericus); blue, lineage C (P. hespericus sp. nov.); and purple, lineage D (P. punctatus). In some populations (7, 8, 9, 10, 11, 22, 23, 36 and 37) we found evidence for admixture (double-colored dots). Background colors represent the ranges of P. punctatus (blue) and P. ibericus (orange) according to current knowledge (www.iucn.org).
FIGURE 12 in Integration of molecular, bioacoustical and morphological data reveals two new cryptic species of Pelodytes (Anura, Pelodytidae) from the Iberian Peninsula
FIGURE 12. Dorsal, ventral and dorsolateral view, and close up of ventral side of forelimb, of living Pelodytes hespericus sp. nov.: (a-b) male holotype JDR 2012-1, (c-f); male paratype JDR 2012-2. Not to scale.
FIGURE 5 in Integration of molecular, bioacoustical and morphological data reveals two new cryptic species of Pelodytes (Anura, Pelodytidae) from the Iberian Peninsula
FIGURE 5. Ventral views of specimen hands (palmar surface) of the four western Pelodytes lineages. The pictures show variation in the size and arrangement of the subarticular and metacarpal tubercles within species and populations, suggesting that no fully diagnostic interspecific differences in this character exist. All photos from specimens in life. M, male, F, female. Asterisks denote mirrored images. Not to scale.
FIGURE 3 in Integration of molecular, bioacoustical and morphological data reveals two new cryptic species of Pelodytes (Anura, Pelodytidae) from the Iberian Peninsula
FIGURE 3. Clustering results of Bayesian assignment analyses using Structure, based on nuclear DNA sequences with the number of clusters K ranging from 1 to 7. Each individual is represented as a vertical bar partitioned into K colored segments, whose length is proportional to the individual's estimated group membership coefficient. The enlarged figure shows the results for K=4, with population numbers as in Fig. 1 and Supplementary Table 1. Population numbers on the top are shown to highlight individuals with mixed ancestry, and the mitochondrial haplogroup (A-D) for each included individual is shown in the bottom. Individuals in the graph are ordered as in Supplementary Table S1. Note that the comparatively large number of putative hybrids is due to the overrepresentation of populations in the contact zones in our analysis, as compared with Díaz- Rodríguez et al. (2015).
FIGURE 11 in Integration of molecular, bioacoustical and morphological data reveals two new cryptic species of Pelodytes (Anura, Pelodytidae) from the Iberian Peninsula
FIGURE 11. (a,b) Dorsal and ventral views of preserved Pelodytes atlanticus sp. nov. holotype (male; specimen GLA-03). (c,d) Dorsolateral view of paratype (GLA-02) and holotype (GLA-03) in life. (e-i) dorsolateral, dorsal, and ventral view, as well as ventral view of hand and foot of male paratype ZSM 194/2016. Not to scale.
FIGURE 10 in Integration of molecular, bioacoustical and morphological data reveals two new cryptic species of Pelodytes (Anura, Pelodytidae) from the Iberian Peninsula
FIGURE 10. Comparative photos of Pelodytes ibericus in life, male above, female below, from near Jerez de la Frontera, Spain. Specimens not collected. Images not to scale.
FIGURE 8 in Integration of molecular, bioacoustical and morphological data reveals two new cryptic species of Pelodytes (Anura, Pelodytidae) from the Iberian Peninsula
FIGURE 8. Comparative photos of Pelodytes punctatus in life. The upper two photos show a male and a female from near Montpellier, France; the lower two pictures show a male and a female from near Vic, Girona, Spain. Specimens not collected. Images not to scale. Identity of P. punctatus individuals assessed by geographical location; specimens not DNA barcoded.
FIGURE 2 in Integration of molecular, bioacoustical and morphological data reveals two new cryptic species of Pelodytes (Anura, Pelodytidae) from the Iberian Peninsula
FIGURE 2. Median-joining networks of Western Palearctic Pelodytes based on six nuclear markers and mtDNA (mt-ND4+mt- CYB). Samples in the nDNA networks are colored according to their assignment to the four major clusters in the mtDNA network, corresponding to the species as color coded in Fig. 1. Each circle represents a different haplotype and its size is proportional to its relative frequency. Black dots represent inferred unsampled or extinct haplotypes. Markers RPL3 and Cherpint7 are represented at the same scale.
FIGURE 7 in Integration of molecular, bioacoustical and morphological data reveals two new cryptic species of Pelodytes (Anura, Pelodytidae) from the Iberian Peninsula
FIGURE 7. Bioacoustic differences between lineages of Pelodytes occurring in the Iberian Peninsula. For raw data, see Supplementary Table S3. The boxplot shows the average number of B notes per call series, i.e, every call consisting of one A note and one or more B notes. Average values were first computed per individual, and then summarized across species. Differences are significant between P. hespericus sp. nov. and all other species, and between P. atlanticus sp. nov. and P. ibericus (ANOVA with Tukey's post-hoc test; see Results).
FIGURE 1 in Speciation in Indo-Pacific swiftlets (Aves: Apodidae): integrating molecular and phenotypic data for a new provisional taxonomy of the Collocalia esculenta complex
FIGURE 1. Distribution of the white-bellied swiftlet (Collocalia esculenta) complex across the Indo-Pacific region, with Stresemann's Line separating eastern and western taxa.
FIGURE 2 in Speciation in Indo-Pacific swiftlets (Aves: Apodidae): integrating molecular and phenotypic data for a new provisional taxonomy of the Collocalia esculenta complex
FIGURE 2. Phylogenetic tree topology based on Bayesian analysis of cyt b sequence data. Taxon names and localities are given for each population. High branch support is given in Maximum Parsimony bootstrap, Maximum Likelihood bootstrap and Bayesian posterior probability (multiplied by 100 for ease of reference) in the same order with a cut-off of Ż85 for bootstrap and Ż99 for posterior probability.
FIGURE 4. Tree from Bayesian inference for Bungarus candidus, B in A new color pattern of the Bungarus candidus complex (Squamata: Elapidae) from Vietnam based on morphological and molecular data
FIGURE 4. Tree from Bayesian inference for Bungarus candidus, B. magnimaculatus, and outgroup taxa. Values (%) at internal nodes are Bayesian posterior probabilities and bootstrap values from maximum parsimony and maximum likelihood, respectively.
FIGURE 2 in A new color pattern of the Bungarus candidus complex (Squamata: Elapidae) from Vietnam based on morphological and molecular data
FIGURE 2. Three blue kraits from Nui Chua NP with 14 or 15 white bands on body. A, ITBCZ 1140; B, ITBCZ 900; and C, ITBCZ 12.
FIGURE 1 in A new color pattern of the Bungarus candidus complex (Squamata: Elapidae) from Vietnam based on morphological and molecular data
FIGURE 1. Map of sampling sites of Bungarus candidus in southern Vietnam. Circles indicate sample sites of B. candidus examined in this study, squares are localities recorded by Campden-Main (1970), and triangle shows the location of the new form of B. candidus from Nui Chua National Park. Localities: 1, Thua Luu, Thua Thien–Hue, Vietnam; 2, Bach Ma NP, Thua Thien–Hue, Vietnam; 3, Ba To, Quang Ngai, Vietnam; 4, Virachey NP, Ratanakiri, Cambodia; 5, Dai Lanh, Phu Yen, Vietnam; 6, Bu Gia Map NP, Binh Phuoc, Vietnam; 7, Da Lat, Lam Dong, Vietnam; 8, Nui Chua NP, Ninh Thuan, Vietnam; 9, Phan Rang, Ninh Thuan, Vietnam; 10, Ta Kou Nature Reserve, Binh Thuan, Vietnam; 11, Bien Hoa, Dong Nai, Vietnam; and 12, Tay Ninh, Vietnam.
FIGURE 3 in Taxonomic revision of the speckled crabs, genus Arenaeus Dana, 1851 (Brachyura: Portunidae) based on morphological and molecular data
FIGURE 3. Arenaeus mexicanus (CCDB 2936) and diagnostic features. A, dorsal view; B, carpus view, with the inner spine (black arrow) and an outer denticle (white arrow) at the carpus; C, frontal view and the absence of a spine in the epistome region, note the concavity instead.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.