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Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
2,063
datasets available to search
ShareScore release 0.9.0
Dataset results
2,063 results for “single cell transcriptomics”
Paired VDJ and transcriptome single cell sequencing in LMP2 multimer-positive human T cells treated with anti-PD-L1 and anti-TIM3 antibodies.
GEO Series GSE181682. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics of human iPSC differentiation dynamics reveal a core molecular network of Parkinson’s disease
GEO Series GSE183248. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Liver Single-Cell Transcriptome Analysis of Cell-specific Dysregulation of Liver Cell Biology Following Intravenous Administration of AAV Vectors
GEO Series GSE124560. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Single Cell Transcriptomics identifies a WNT7A-FZD5 Signaling Axis that maintains Fallopian Tube Stem Cells in Patient-derived Organoids [bulk RNA-seq]
GEO Series GSE239581. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Obtention of viable cell suspensions from breast cancer tumor biopsies for 3D chromatin conformation and single cell transcriptome analysis [scRNA-seq1]
GEO Series GSE264644. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Developmental single-cell transcriptomics in the Lytechinus variegatus sea urchin embryo
GEO Series GSE184538. Lytechinus variegatus. 19 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptomes of zebrafish germline reveal progenitor types and feminization by Foxl2l [scRNA-seq]
GEO Series GSE173718. Danio rerio. 2 samples. Type: Expression profiling by high throughput sequencing.
CSF single cell transcriptomic changes associated with post-acute sequelae of SARS CoV 2 infection
GEO Series GSE241385. Homo sapiens. 28 samples. Type: Expression profiling by high throughput sequencing.
BART-Seq: cost-effective massively parallelized targeted sequencing for genomics, transcriptomics, and single cell analysis [Differentiation]
GEO Series GSE130420. Homo sapiens. 3 samples. Type: Other; Expression profiling by high throughput sequencing.
Temporally resolved single-cell transcriptomics defines immune dysfunction trajectories in glioblastoma
GEO Series GSE232040. Mus musculus. 167 samples. Type: Expression profiling by high throughput sequencing.
single cell transcriptomic analysis of embyronic hearts with fibroblast ablation
GEO Series GSE272048. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic analysis of human hepatocellular carcinoma
GEO Series GSE146115. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptome mapping reveals cell type-specific effects on gene expression by acute delta9-tetrahydrocannabinol
GEO Series GSE130228. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Joint probabilistic modeling of paired transcriptome and proteome measurements in single cells [CITE-seq of mouse spleen and lymph nodes]
GEO Series GSE150599. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell transcriptome conservation in a comparative analysis of fresh and cryopreserved human skin tissue: pilot in localized scleroderma
GEO Series GSE160536. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptome Profiling of PBMCs in Response to Diverse Immune Adjuvant Stimuli
GEO Series GSE292981. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics reveals receptor transformations during olfactory neurogenesis
GEO Series GSE75413. Mus musculus. 93 samples. Type: Expression profiling by high throughput sequencing.
A transcriptome-based molecular census of human basal cell carcinoma subtypes at single cell resolution
GEO Series GSE141526. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic profiles reveal changes associated with BCG-induced trained immunity and protective effects in circulating monocytes
GEO Series GSE184241. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.
Integrative analysis of transcriptomic and epigenomic dynamics of liver organoids using single cell RNA-seq and ATAC-seq.
GEO Series GSE159557. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.