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Figure 5 in Description of Prionchulus jonkershoekensis n. sp. (Nematoda: Mononchida), a new predatory species from South Africa
Figure 5: A 50% majority rule Bayesian phylogenetic tree of Mononchidae, including PriOnChUlUS JOnkerShOekenSiS n. sp. from South Africa, based on the partial 28 S rDNA sequences under the GTR + G model. The sequence of the new species is in boldface font.
Figure 1 in Description of Prionchulus jonkershoekensis n. sp. (Nematoda: Mononchida), a new predatory species from South Africa
Figure 1: Line drawings of PriOnChUlUS JOnkerShOekenSiS n. sp. female. (A) Head region in lateral view; (B) Entire body; (C) Neck region; (D) Pharyngo-intestinal junction (cardia); (E) Anterior genital branch with egg; (F) Posterior genital branch; (G) Rectal region and tail. (Scale bars: A, D = 20 µm; B, C = 100 µm; E, G = 50 µm; F = 10 µm).
Figure S2 in Steinernema africanum n. sp. (Rhabditida, Steinernematidae), a New Entomopathogenic Nematode Species Isolated in the Republic of Rwanda
Figure S2: Pairwise comparisons of the nucleotide sequences of the D2–D3 expansion segments of the 28S rRNA. (A) Sequence similarities (%). (B) Number of nucleotide differences (bp). A total of 786 nucleotide positions, flanked by primers D2F and 536, were analyzed. NCBI accession numbers of the nucleotide sequences used for the analyses are shown next to the species names. NCBI, National Center for Biotechnology Information.
Figure 3 in Description of Nothotylenchus savadkoohensis n. sp. (Rhabditida, Anguinidae) from Iran based on morphological and molecular data
Figure 3: Bayesian 50% majority rule consensus tree inferred from D2-D3 expansion region of LSU rDNA sequence of NOtHOtylenCHUS SaVadKOOHenSiS n. sp. from Mazandaran province under the GTR + G + I model. Bayesian posterior probability (BPP) values>0.50 are given for appropriate clades. The newly generated sequence of the new species is in bold font.
Figure 9 in Steinernema africanum n. sp. (Rhabditida, Steinernematidae), a New Entomopathogenic Nematode Species Isolated in the Republic of Rwanda
Figure 9: Phylogenetic relationships between the XenOrhabdUS symbiont isolated from Steinernema afriCanUm n. sp. and other XenOrhabdUS species. Phylogenetic trees were built based on core genome sequences. A total of 1,719,910 nucleotide positions were used in the analyses. Numbers at the nodes represent SH-like branch supports. Bar represents 0.05 nucleotide substitutions per sequence position. Accession numbers of the genome sequences used for the reconstruction are shown in Table S1 in Supplementary Material.
Figure S1 in Steinernema africanum n. sp. (Rhabditida, Steinernematidae), a New Entomopathogenic Nematode Species Isolated in the Republic of Rwanda
Figure S1: Pairwise comparisons of the ITS nucleotide sequences. (A) Sequence similarities (%). (B) Number of nucleotide differences (bp). A total of 808 nucleotide positions, flanked by primers 18S and 26S, were analyzed. NCBI accession numbers of the nucleotide sequences used for the analyses are shown next to the species names. ITS, internal transcribed spacer; NCBI, National Center for Biotechnology Information.
Figure 3 in Basilaphelenchus hyrcanus n. sp. (Rhabditida: Tylaphelenchinae) associated with bark of a beech tree (Fagus orientalis Lipsky) from northern Iran
Figure 3: Bayesian 50% majority rule consensus tree inferred from the small subunit (SSU) rDNA gene sequences of BaSilaphelenChUS hyrCanUS n. sp. under the GTR + G + I model. Bayesian posterior probabilities (BPP) and maximum likelihood bootstrap (ML BS) values greater than 0.50 and 50, respectively, are given for appropriate clades in the pattern of BPP/ML BS. The new species taxon is represented in bold.
Figure 3 in An interesting rare tylenchid species, Antarctenchus urmiensis n. sp. (Tylenchomorpha; Psilenchidae) from Urmia Lake islands, northwest Iran, with a discussion on the taxonomy of related genera
Figure 3: Scanning electron microscopic (SEM) images of ANtarCteNCHUS UrmieNSiS n. sp. (Female) (A-C) Anterior end in ventral, sublateral and frontal views, respectively (arrows pointing the amphidial openings); (D) Deirid (withe arrow) and excretory pore in lateral view (black arrow); (E) Secretoryexcretory pore (arrow); (F) Lateral field; (G&H) Vulva in lateral and ventral views, respectively; (I) Posterior end in lateral view (arrow pointing the anus);(J) Anus (arrow) in lateral view; (K) Tail tip.
Figure 4 in An interesting rare tylenchid species, Antarctenchus urmiensis n. sp. (Tylenchomorpha; Psilenchidae) from Urmia Lake islands, northwest Iran, with a discussion on the taxonomy of related genera
Figure 4: Bayesian 50% majority rule consensus tree of ANtarCteNCHUS UrmieNSiS N. SP. based on SSU rDNA sequences under GTR + I + G model. Bayesian posterior probability values more than 0.50 are given for appropriate clades. The new sequence is indicated in bold.
Figure 1 in An interesting rare tylenchid species, Antarctenchus urmiensis n. sp. (Tylenchomorpha; Psilenchidae) from Urmia Lake islands, northwest Iran, with a discussion on the taxonomy of related genera
Figure 1: Line drawings of ANtarCteNCHUS UrmieNSiS n. sp. (A-C, E-I: Female; D&J: Male) (A) Pharynx; (B) Anterior genital tract; (C&E) Anterior body end; (D) Male reproductive system; (F) Vulval region; (G&H) Female tail (phasmids are shown at two foci); (I) Bursa; (J) Male tail, spicule, and bursa.
Figure 2 in An interesting rare tylenchid species, Antarctenchus urmiensis n. sp. (Tylenchomorpha; Psilenchidae) from Urmia Lake islands, northwest Iran, with a discussion on the taxonomy of related genera
Figure 2: Light micrographs of ANtarCteNCHUS UrmieNSiS n. sp. (A,B,E,F,G,H,I,J,M,P,Q: Female; C,D,K,L,N,O,R: Male) (A-D) Anterior body end; (E) Anterior body region; (F) Pharyngeal median bulb; (G) Part of female reproductive system; (H) Distal end of ovary; (I) Pharyngeal bulb; (J) Lateral lines; (K) Male tail; (L) Phasmid; (M) Female tail; (N) Bursa; (O&P) Entire body; (Q) Vulval region; (R) Spicule and gubernaculum. (Scale bars: A-N, Q&R = 10 μm; O&P = 50 μm).
Figure 12 in Tokorhabditis tauri n. sp. and T. atripennis n. sp. (Rhabditida: Rhabditidae), isolated from Onthophagus dung beetles (Coleoptera: Scarabaeidae) from the Eastern USA and Japan
Figure 12: Differential interference contrast micrographs of the gonadal region of TOKOrhabditiS atripenniS n. sp. hermaphrodites. All images are in right lateral view. (A)–(C) Anterior gonad of maturing adult (A), young adult (B), and fourth-stage juvenile (C). (D) Vulval region of young adult in two focal planes. (E) Vulval region of mature adult. em, embryos; ov, ovary; sp, sperm. Arrowhead marks vulva in (A)–(C).
Figure 11 in Tokorhabditis tauri n. sp. and T. atripennis n. sp. (Rhabditida: Rhabditidae), isolated from Onthophagus dung beetles (Coleoptera: Scarabaeidae) from the Eastern USA and Japan
Figure 11: Differential interference contrast micrographs of the male tail region of TOKOrhabditiS atripenniS n. sp. (A) Right lateral view in three focal planes. (B) Ventral view in four focal planes. Genital papillae are labeled with the prefix "P"; suffix "d" indicates papillae that open dorsally or laterally. Ph, phasmid.
Figure 9 in Tokorhabditis tauri n. sp. and T. atripennis n. sp. (Rhabditida: Rhabditidae), isolated from Onthophagus dung beetles (Coleoptera: Scarabaeidae) from the Eastern USA and Japan
Figure 9: Mature hermaphrodite, male, and dauer juvenile of TOKOrhabditiS atripenniS n. sp. (A) Mature hermaphrodite. (B) Male. (C) Dauer juvenile.
Figure 2 in Paratylenchus ilicis n. sp. (Nematoda: Paratylenchinae) Associated with Holly from the Netherlands and New Taxonomical and Phylogenetic Support for the Synonymization of Cacopaurus with Paratylenchus
Figure 2: Light and SEM images of PaRatyleNChUS iliCiS n. sp. paratype juveniles (J2) and males. A, E: eN FaCe of J2; B–D: Anterior regions showing stylet and pharynx of J2; F–I: Tail regions showing characteristic finger-like tip of J2; J: Total bodies of J2; K: Total bodies of males; L–M: Anterior regions of males showing absence of stylet; N–O: Tail regions showing spicules. SEM: scanning electron microscopy.
Figure 6 in Tokorhabditis tauri n. sp. and T. atripennis n. sp. (Rhabditida: Rhabditidae), isolated from Onthophagus dung beetles (Coleoptera: Scarabaeidae) from the Eastern USA and Japan
Figure 6: Differential interference contrast micrographs of the dauer juvenile of TOKOrhabditiS taUri n. sp. All images are in left lateral view. (A) Lip and stomatal region in three focal planes. (B) Surface structure of mid-body. Parallel lines mark lateral lines. (C) Middle to posterior part of pharynx. (D) Genital anlage. (E) Tail region. a, anus; am, amphid; bb, basal bulb; ga, genital anlage; ep, excretory pore; mb, median bulb; s, sheath; tt, tail tip.
Figure 7 in Tokorhabditis tauri n. sp. and T. atripennis n. sp. (Rhabditida: Rhabditidae), isolated from Onthophagus dung beetles (Coleoptera: Scarabaeidae) from the Eastern USA and Japan
Figure 7: Scanning electron micrograph of the labial region of a female of TOKOrhabditiS taUri n. sp. am, amphid; ld, left dorsal labial sensillum; ldc, left dorsal cephalic sensillum; ll, left lateral labial sensillum; lsv, left subventral labial sensillum; lsvc, left subventral cephalic sensillum; rd, right dorsal labial sensillum; rdc, right dorsal cephalic sensillum; rsv, right subventral labial sensillum.
Figure 1 in Paratylenchus ilicis n. sp. (Nematoda: Paratylenchinae) Associated with Holly from the Netherlands and New Taxonomical and Phylogenetic Support for the Synonymization of Cacopaurus with Paratylenchus
Figure 1: Light and SEM images of PaRatyleNChUS iliCiS n. sp. paratype females. A: EN FaCe; B, C, F: Anterior regions showing cuticular ornamentation, stylet, pharynx, and SE pore position; D–E: Total body of (slightly) obese bodies showing major internal structures; G–M: Tail regions showing lateral field, vulva, and tail termini. SE pore: secretory-excretory pore; SEM: scanning electron microscopy.
Figure 14 in Tokorhabditis tauri n. sp. and T. atripennis n. sp. (Rhabditida: Rhabditidae), isolated from Onthophagus dung beetles (Coleoptera: Scarabaeidae) from the Eastern USA and Japan
Figure 14: Scanning electron micrograph of the male tail of TOKOrhabditiS atripenniS n. sp. Genital papillae are labeled with the prefix "P"; suffix "d" indicates papillae that open dorsally or laterally.
Figure 4 in Tokorhabditis tauri n. sp. and T. atripennis n. sp. (Rhabditida: Rhabditidae), isolated from Onthophagus dung beetles (Coleoptera: Scarabaeidae) from the Eastern USA and Japan
Figure 4: Differential interference contrast micrographs of the hermaphrodite and female of TOKOrhabditiS taUri n. sp. All imaged individuals are of hermaphrodite except for (D), showing female. (A) Lip and stomatal region in left lateral view in five focal planes. (B) Posterior pharynx region in left lateral view in three focal planes. (C) Entire gonad of mature hermaphrodite in right lateral view. (D) Gonadal region of overmature female in right lateral view. (E), (F). Vulval region of young hermaphrodite in right lateral (E) and ventral (F) views. (G). Anal region in left lateral view in two focal planes. a, anus; am, amphid; bb, basal bulb; cs, cephalic sensilla; dr, deirid; d, dorsal denticles; ep, excretory pore; ls, labial sensilla; lsv, left subventral denticles; mb, median bulb; nr, nerve ring; ph, phasmid; rsv, right subventral denticles.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.