Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
2,063
datasets available to search
ShareScore release 0.9.0
Dataset results
2,063 results for “single cell transcriptomics”
Single cell transcriptomes of hepatic immune cells from mice with and without colorectal cancer liver metastasis
GEO Series GSE157600. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics of NRAS-mutated melanoma transitioning to drug resistance: elevated P2RX7 levels indicate response to targeted therapy
GEO Series GSE230538. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
In silico lineage tracing through single cell transcriptomes identifies a neural stem cell population in planarians
GEO Series GSE79866. Schmidtea mediterranea. 171 samples. Type: Expression profiling by high throughput sequencing.
Unraveling the Phenotypic States of Human innate-like T Cells in thymus and blood: Insights from Single-Cell Transcriptomics
GEO Series GSE249684. Homo sapiens. 7 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptome analysis of Arabidopsis roots inoculated by Plasmodiophora brassicae indicates a role for brassinosteroids in clubroot formation.
GEO Series GSE44676. Arabidopsis thaliana. 8 samples. Type: Expression profiling by array.
scPower accelerates and optimizes the design of multi-sample single cell transcriptomic studies
GEO Series GSE185714. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
A single cell transcriptome atlas of the developing zebrafish hindbrain [Fgf20a]
GEO Series GSE141425. Danio rerio. 7 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome and TCR analysis of human Cytomegalovirus (hCMV)-specific T cell memory reveals effector and pre-effectors of CD8+ and CD4+ cytotoxic T cells
GEO Series GSE235604. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptomic and VDJ sequencing of antibody-secreting cells (ASCs) from the bone marrow, spleen and thymus of young (3 months old) female and male mice.
GEO Series GSE193701. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Droplet barcoding for single cell transcriptomics applied to embryonic stem cells
GEO Series GSE65525. Mus musculus; Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic profiling of mouse amygdala during opioid dependence and withdrawal by single-cell RNA sequencing
GEO Series GSE207128. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptomic analysis (10x Genomics) of mouse splenic CD4+ T cells
GEO Series GSE111070. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
A single-cell transcriptomic landscape of innate and adaptive intratumoral immunity in triple negative breast cancer during chemo- and immunotherapies
GEO Series GSE191246. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing.
Single Cell Transcriptomic Analysis of Popliteal Lymphatic Vessels and Peripheral Veins with Smooth Muscle Cell Enrichment in TNF-Tg vs WT Mice
GEO Series GSE190999. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptome sequencing of CS11 and CS15 human yolk sacs
GEO Series GSE137010. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
A Single Cell Transcriptome Atlas of The Domestic Pig
GEO Series GSE193975. Sus scrofa domesticus. 45 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics of the human placenta: inferring the cell communication network of the maternal-fetal interface
GEO Series GSE87692. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomes and runx2b−/− mutants reveal the genetic signatures of intermuscular bone formation in teleosts
GEO Series GSE186957. Danio rerio. 8 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome map of the human brain at the single-cell resolution
GEO Series GSE127774. Pan paniscus; Homo sapiens; Macaca mulatta; Pan troglodytes. 17 samples. Type: Expression profiling by high throughput sequencing.
A mouse model with high clonal barcode diversity for joint lineage, transcriptomic, and epigenomic profiling in single cells [BiSulfite-seq]
GEO Series GSE222328. Mus musculus. 1080 samples. Type: Methylation profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.