Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
1,353
datasets available to search
ShareScore release 0.9.0
Dataset results
1,353 results for “single-cell transcriptomics”
Single-cell transcriptome profiling reveals developmental trajectory and transcriptional regulatory networks of mouse maxillary prominence
GEO Series GSE161143. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
A single-cell transcriptome landscape of the non-human primate placenta across pregnancy.
GEO Series GSE180637. Macaca fascicularis. 23 samples. Type: Expression profiling by high throughput sequencing.
Dissecting the fate of Foxl2-expressing cells in ovary development using lineage tracing and Single-Cell Transcriptomics
GEO Series GSE163879. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
A dataset of single-cell transcriptomic atlas of Bama pigs and potential marker genes across seven tissues
GEO Series GSE241555. Sus scrofa. 7 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic analysis unveils the diversity within mammalian spinal motor neurons
GEO Series GSE183759. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomes for paired uninflamed and inflamed mucosal tissues of CD patients
GEO Series GSE236459. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptomics Identifies TOX as a Key Transcriptional Regulator of Progenitor-Like CD8 T Cells in Chronic Infection [ChIP-seq]
GEO Series GSE119941. Mus musculus. 16 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A single-cell transcriptomic analysis of the mouse hippocampus after voluntary exercise
GEO Series GSE234278. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Parallel Bimodal Single-cell Sequencing of Transcriptome and Chromatin Accessibility [40-K562_ATAC]
GEO Series GSE151734. Homo sapiens. 40 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell transcriptomic atlas reveals the evolution of immune cells and molecules across multiple vertebrate species
GEO Series GSE186158. Danio rerio; Macaca mulatta; Homo sapiens; Sus scrofa; Xenopus tropicalis; Mus musculus; Rattus norvegicus. 7 samples. Type: Expression profiling by high throughput sequencing.
Functional drug testing of pediatric acute lymphocytic leukemia cells by single-cell transcriptome sequencing for mapping cellular drug response
GEO Series GSE229617. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.
Parallel Bimodal Single-cell Sequencing of Transcriptome and Chromatin Accessibility (Mouse single cell ATAC-Seq mESCs)
GEO Series GSE148270. Mus musculus. 192 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell transcriptomic mapping of immune cells in mouse bladders during urinary tract infection
GEO Series GSE260501. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Putative Regulators for the Continuum of Erythroid Differentiation Revealed by Single-cell Transcriptome of Human BM and UCB Cells[scRNA-seq]
GEO Series GSE150774. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics of human oocytes: environment-driven metabolic competition and compensatory mechanisms during oocyte maturation
GEO Series GSE110798. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-cell and spatial transcriptomics reveal the pathogenesis of chronic granulomatous disease under natural conditions [SPF or CL]
GEO Series GSE271387. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
sox1a:eGFP transgenic line and single-cell transcriptomics reveal the origin of zebrafish intraspinal serotonergic neurons
GEO Series GSE226494. Danio rerio. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell Transcriptomic Profiling of the Hypothalamic Median Eminence during Aging
GEO Series GSE179442. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell Transcriptomic Profiling Unveils Cardiac Cell-type Specific Response to Maternal Hyperglycemia Underlying the Risk of Congenital Heart Defects
GEO Series GSE193746. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
A single-cell transcriptomic inventory of murine smooth muscle cells
GEO Series GSE210106. Mus musculus. 4973 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.