Find research datasets worth reusing

opencc-by-4.0Dec 2021View details →

Fig. 1 in A report of 28 unrecorded bacterial species in Korea, isolated from freshwater and sediment of the Han River watershed in 2020

Fig. 1. Neighbor-joining phylogenetic tree based on 16S rRNA gene sequences showing the relationship between the strains isolated in this study and their closest bacterial species. Bootstrap values over 70% are shown at nodes for neighbor-joining, maximum parsimony, and maximum likelihood methods, respectively. Filled circles indicate that the corresponding node was also recovered in the trees reconstructed with both the maximum parsimony and maximum likelihood algorithms, while open circles indicate that the corresponding node was recovered in the tree generated with only one of these algorithms. Scale bar = 0.02 substitutions per nucleotide position.

opencc-by-4.0Dec 2021View details →

Fig. 2 in First report and morphological description of two Acrobeloides species (Nematoda: Rhabditida: Cephalobidae) in South Korea

Fig. 2. Acrobeloides tricornis (Thorne, 1925) Thorne, 1937. A, Entire female; B, Female neck region; C, Female posterior region; D, Female head region; E, Female reproductive system. am, amphid; an, anus; bb, basal bulb; ca, cardia; co, corpus; cpa, cephalic papilla; de, deirid; ep, excretory pore; in, intestine; is, isthmus; lf, lateral field; lpa, labial papilla; lpr, labial probolae; nr, nerve ring; ovi, oviduct; ova, ovary; pa, primary axil; ph, phasmid; re, rectum; sa, secondary axil; spe, spermatheca; st, stoma; ut, uterus; va, vagina; vu, vulva.

opencc-by-4.0Dec 2021View details →

Fig. 1 in First report and morphological description of two Acrobeloides species (Nematoda: Rhabditida: Cephalobidae) in South Korea

Fig. 1. Acrobeloides bodenheimeri (Steiner, 1936) Thorne, 1937. A, Entire female; B, Female neck region; C, Female posterior region; D, Female head region; E, Female reproductive system. am, amphid; an, anus; bb, basal bulb; ca, cardia; co, corpus; cpa, cephalic papilla; de, deirid; ep, excretory pore; in, intestine; is, isthmus; lf, lateral field; lpa, labial papilla; lpr, labial probolae; nr, nerve ring; ovi, oviduct; ova, ovary; pa, primary axil; ph, phasmid; pus, post-uterine sac; re, rectum; spe, spermatheca; st, stoma; ut, uterus; va, vagina; vu, vulva.

Fig. 1 in First report of Mesorhabditis microbursaris (Nematoda: Rhabditida: Mesorhabditidae) from Korea

Fig. 1. Mesorhabditis microbursaris (Steiner, 1926) Sudhaus, 2011. A, Entire female; B, Female neck region; C, Female reproductive system; D, Female posterior region; E, Entire male; F, Male posterior region. an, anus; bb, basal bulb; bu, bursa; ca, cardia; ep, excretory pore; gp, genital papillae; gu, gubernaculum; in, intestine; is, isthmus; lf, lateral field; mc, metacorpus; nr, nerve ring; ov, ovary; pc, procorpus; ph, phasmid; re, rectum; sp, spicule; st, stoma; te, testis; ut, uterus; va, vagina; vu, vulva.

Fig. 1 in Report of eight unrecorded Acetobacter species in Korea, discovered during the survey in 2018-2019

Fig. 1. Neighbor-joining phylogenetic tree showing the phylogenetic relationships of strains reported in this study and related species of Acetobacter, based on 16S rRNA gene sequences. Numbers on nodes correspond to bootstrap values for branches (1,000 replicates); only values over 50% are shown. Filled circles indicate the corresponding nodes that were also recovered in trees constructed using the maximum-likelihood and maximum-parsimony algorithms. Gluconacetobacter liquefaciens IFO 12388T (X75617) was used as an outgroup. Scale bar, 0.005 substitutions per nucleotide.

Fig. 1 in Morphological description and DNA barcode information of seven newly reported nudibranch species from Korea

Fig. 1. Images of seven Nudibranchia species in Korea. A, Dendronotus primorjensis Martynov, Sanamyan & Korshunova, 2015; B, Doto japonica Odhner, 1936; C, Trinchesia ornata (Baba, 1937); D, E, Antiopella fusca (O'Donoghue, 1924); F, Cadlina paninae Korshunova, Fletcher, Picton, Lundin, Kashio, N. Sanamyan, K. Sanamyan, Padula, Schrödi & Martynov, 2020; G, Rostanga bifurcata Rudman & Avern, 1989; and H, Goniodoridella savignyi Pruvot-Fol, 1933.

Fig. 2 in Report of eight unrecorded Acetobacter species in Korea, discovered during the survey in 2018-2019

Fig. 2. Transmission electron micrographs of the isolated strains. Strains: 1, Acetobacter fabarum C10-3; 2, Acetobacter lovaniensis KDGEC1; 3, Acetobacter okinawensis GAM12-M2; 4, Acetobacter orientalis FR32C4; 5, Acetobacter papaya FR35B3; 6, Acetobacter suratthaniensis GAM15-R2; 7, Acetobacter syzygii C25-1; 8, Acetobacter thailandicus JDF1-M1. Arrows indicate flagellum.

Fig. 2 in A report of 20 unrecorded bacterial species isolated from the coastal area of Korean islands in 2022

Fig. 2. Transmission electron micrographs of cells of the strains isolated in this study. Strains: 1. IMCC43116 (0.2 μm); 2. IMCC43200 (0.2 μm); 3. IMCC43225 (0.5 μm); 4. IMCC43240 (0.2 μm); 5. IMCC43252 (0.5 μm); 6. IMCC43266 (0.2 μm); 7. IMCC43345 (0.5 μm); 8. IMCC43261 (0.5 μm); 9. IMCC43586 (0.2 μm); 10. IMCC33673 (0.2 μm); 11. IMCC33772 (0.5 μm); 12. IMCC33842 (0.2 μm); 13. IMCC43611 (0.2 μm); 14. IMCC43617 (0.5 μm); 15. IMCC43655 (0.5 μm); 16. IMCC43657 (0.5 μm); 17. IMCC43666 (0.5 μm); 18. IMCC43670 (0.5 μm); 19. IMCC33788 (0.5 μm); 20. IMCC33805 (0.2 μm). Scale bars are indicated in parenthesis after strain ID.

Fig. 3 in A report of 18 unrecorded prokaryotic species isolated from the feces of an Oriental stork (Ciconia boyciana), and from the intestinal tracts of a cobitid fish (Kichulchoia multifasciata) and a Korean splendid dace (Coreoleuciscus splendidus)

Fig. 3. Phylogenetic tree based on 16S rRNA gene sequence comparisons, showing the relationship between the seven strains belonging to the phylum Firmicutes isolated in this study and the notable type species from each genus. The tree was reconstructed using neighbor joining (NJ), maximum likelihood (ML), and maximum parsimony (MP) algorithms. Filled diamonds indicate corresponding branches present in the phylogenetic tree generated using the three different tree construction methods. Numbers at the nodes represent bootstrap values of more than 70% are shown, based on 1000 replicates (NJ/MP/ML). Limnochorda pilosa HC45T (AP014924) was used as the outgroup. The bar indicates 0.02 accumulated substitutions per nucleotide.

Fig. 4 in A report of 18 unrecorded prokaryotic species isolated from the feces of an Oriental stork (Ciconia boyciana), and from the intestinal tracts of a cobitid fish (Kichulchoia multifasciata) and a Korean splendid dace (Coreoleuciscus splendidus)

Fig. 4. Phylogenetic tree based on 16S rRNA gene sequence comparisons, showing the relationship between the two strains belonging to the phylum Proteobacteria isolated in this study and the notable type species from each family. The tree was reconstructed using neighbor joining (NJ), maximum likelihood (ML), and maximum parsimony (MP) algorithms. Filled diamonds indicate corresponding branches present in the phylogenetic tree generated using the three different tree construction methods. Numbers at the nodes represent bootstrap values of more than 70% are shown, based on 1000 replicates (NJ/MP/ML). Bacteroides fragilis NCTC 9343T (NR_074784.2) was used as the outgroup. The bar indicates 0.05 accumulated substitutions per nucleotide.

Figs. 1-9 in New report of Diekeana insignis (Gorham, 1892) (Coleoptera: Coccinellidae: Epilachnini) in South Korea

Figs. 1-9. Male of Diekeana insignis (Gorham, 1892): 1) dorsal habitus; 2) head, dorsal view; 3) mouthparts, ventral view; 4) pronotum, dorsal view; 5) prosternal process, ventral view; 6) abdomen, ventral view; 7) abdominal ventrite VI; 8) genitalia, ventral view; 9) genitalia, lateral view. Scale bars = 0.5 mm (2, 3, 5, 7), 2.0 mm (1, 4, 6, 8, 9).

Fig. 1 in A report of 20 unrecorded bacterial species isolated from the coastal area of Korean islands in 2022

Fig. 1. The maximum-likelihood (ML) phylogenetic tree based on 16S rRNA gene sequences showing the relationship between the strains isolated in this study and their closest bacterial species. Bootstrap values over 70% are shown at nodes for ML, neighbor-joining (NJ), and minimum evolution (ME) methods, respectively (ML/NJ/ME; -, less than 70%). Tree was rooted with Dehalococcoides mccartyi KCTC 15142T (not shown; GenBank accession no. AX814128). Filled circles indicate that the corresponding node was also recovered in the trees reconstructed with both the NJ and ME algorithms, while open circles indicate that the corresponding node was recovered in the tree generated with only one of these algorithms. Scale bar = 0.05 substitutions per nucleotide position.

Fig. 1 in A report on 20 unrecorded bacterial species of Korea isolated from soil in 2021

Fig. 1. Scanning electron microscopy (SEM) and transmission electron microscopy (TEM) images of cells of the unrecorded strains isolat- ed in this study. Images 10 and 14 are TEM images, the rest are SEM images. The strains were cultured at their optimal growth conditions. (1) EM0341, (2) EM0359, (3) EM0662, (4) EM0665, (5) EM1075, (6) EM1106, (7) EM1152, (8) EM1158, (9) EM1187, (10) FL16, (11) JN1309, (12) JN2214, (13) NC19, (14) NSM-1, (15) RB28, (16) RM1, (17) WD4, (18) WR2, (19) WS2, (20) WS11.

Fig. 2 in Report of fern spore-feeding Calicotis latebrifica Terada, 2016 (Lepidoptera, Stathmopodidae) new to Korea

Fig. 2. Larval shelters of Calicotis latebrifica Terada, 2016. A. shelters on Dryopteris nipponensis Koidz., B. an expanded shelter, scale bar = 5 mm.

Fig. 2 in A report of 18 unrecorded prokaryotic species isolated from the feces of an Oriental stork (Ciconia boyciana), and from the intestinal tracts of a cobitid fish (Kichulchoia multifasciata) and a Korean splendid dace (Coreoleuciscus splendidus)

Fig. 2. Phylogenetic tree based on 16S rRNA gene sequence comparisons, showing the relationship between the eight strains belonging to the phylum Actinobacteria isolated in this study and the notable type species from each genus. The tree was reconstructed using neighbor joining (NJ), maximum likelihood (ML), and maximum parsimony (MP) algorithms. Filled diamonds indicate corresponding branches present in the phylogenetic tree generated using the three different tree construction methods. Numbers at the nodes represent bootstrap values of more than 70% are shown, based on 1000 replicates (NJ/MP/ML). Akkermansia muciniphila ATCC BAA-835T (NR_074436.1) was used as the outgroup. The bar indicates 0.02 accumulated substitutions per nucleotide.

Fig. 1 in A report of 18 unrecorded prokaryotic species isolated from the feces of an Oriental stork (Ciconia boyciana), and from the intestinal tracts of a cobitid fish (Kichulchoia multifasciata) and a Korean splendid dace (Coreoleuciscus splendidus)

Fig. 1. Transmission electron micrographs of the strains isolated in this study. The arrows indicate flagella. Strains: 1, H11M7; 2, H11M9; 3, H23M10; 4, H21T1; 5, H13T1; 6, H43T7; 7, H21T20; 8, H23M25; 9, H23M9; 10, S13R1; 11, H13R26; 12, H11M5; 13, H11M15; 14, H11R12; 15, H21T7; 16, H11R21; 17, M13M1; 18, H23T21.

Fig. 2. A in A report on 20 unrecorded bacterial species of Korea isolated from soil in 2021

Fig. 2. A neighbor-joining phylogenetic tree based on 16S rRNA gene sequences showing the relationship between the strains isolated in this study and their relatives. Bootstrap values (>70%) are shown at the nodes. Bar: 0.050 substitutions per nucleotide po- sition.

Fig. 3 in A report of 39 unrecorded bacterial species in Korea belonging to the classes Betaproteobacteria and Gammaproteobacteria isolated in 2018

Fig. 3. Neighbor-joining phylogenetic tree, based on 16S rRNA gene sequences, showing the relationship between the strains isolated in this study and their relatives of the class Betaproteobacteria. Numbers at the nodes are levels of bootstrap value (%) based on 1000 replicat- ed datasets; only values above 70% are shown. Escherichia coli ATCC 11775T (X80725) was used as an outgroup. Bar, 0.02 substitutions per nucleotide position.

Fig. 5 in A report of 39 unrecorded bacterial species in Korea belonging to the classes Betaproteobacteria and Gammaproteobacteria isolated in 2018

Fig. 5. Neighbor-joining phylogenetic tree, based on 16S rRNA gene sequences, showing the relationship between the strains isolated in this study and their relatives of the orders Lysobacterales and Oceanospirillales in the class Gammaproteobacteria. Numbers at the nodes are levels of bootstrap value (%) based on 1000 replicated datasets; only values above 70% are shown. Bacillus subtilis subsp. subtilis NCIB 3610T (ABQL01000001) was used as an outgroup. Bar, 0.02 substitutions per nucleotide position.

Fig. 5 in A report of 18 unrecorded prokaryotic species isolated from the feces of an Oriental stork (Ciconia boyciana), and from the intestinal tracts of a cobitid fish (Kichulchoia multifasciata) and a Korean splendid dace (Coreoleuciscus splendidus)

Fig. 5. Phylogenetic tree based on 16S rRNA gene sequence comparisons, showing the relationship between strain H23T21 and the notable type species from the family Sphingobacteriaceae. The tree was reconstructed using neighbor joining (NJ), maximum likelihood (ML), and maximum parsimony (MP) algorithms. Filled diamonds indicate corresponding branches present in the phylogenetic tree generated using the three different tree construction methods. Numbers at the nodes represent bootstrap values of more than 70% are shown, based on 1000 replicates (NJ/MP/ML). Filobacterium rodentium SMR-CT (LC055729) was used as the outgroup. The bar indicates 0.05 accumulated substitutions per nucleotide.