Skip to main content
Powered by ShareScore

Find research datasets worth reusing

Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.

11,105

datasets available to search

ShareScore release 0.9.0

Reset

Dataset results

11,105 results for “single cells”

Learn how ShareScore rates datasets ↗
geo24/100

Single-Cell Analysis Reveals Cellular Reprogramming in Advanced Colon Cancer Following FOLFOX-Bevacizumab Treatment

GEO Series GSE232525. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2023View details →
geo24/100

Single cell and pooled embryo RNA-seq of of early Ciona embryos

GEO Series GSE110588. Ciona intestinalis. 105 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2018View details →
geo24/100

Single-cell transcriptional and functional analysis of human dopamine neurons in 3D fetal ventral midbrain organoid like cultures

GEO Series GSE192405. Homo sapiens. 13 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2022View details →
geo24/100

bigSCale: An Analytical Framework for Big-Scale Single Cell Data

GEO Series GSE102934. Homo sapiens. 1847 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2018View details →
geo24/100

Comprehensive analysis of metastatic gastric cancer tumor cells using Single-cell RNA-seq

GEO Series GSE158631. Homo sapiens. 94 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2020View details →
geo24/100

Single-cell transcriptomics reveals that human milk feeding shapes neonatal immune cell interleukin signaling pathways in a non-randomized clinical trial

GEO Series GSE296678. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2025View details →
geo24/100

A single-cell level comparison of human inner ear organoids with the human cochlea and vestibular organs

GEO Series GSE214099. Homo sapiens. 7 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2023View details →
geo24/100

Single cell RNA sequencing for mouse femoral artery

GEO Series GSE139827. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2019View details →
geo24/100

Single-cell transcriptomic resolution of human pancreatic islets reveals cellular states and intercellular interactions associated with type 1 diabetes

GEO Series GSE148073. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2021View details →
geo24/100

Single-cell gene expression profiling of a murine cell line with and without heat stress.

GEO Series GSE295778. Mus musculus. 360 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2025View details →
geo24/100

Tetraspanin family member functionally resolves and facilitates the purification of adult pluripotent stem cells used for whole-body regeneration (Single)

GEO Series GSE107873. Schmidtea mediterranea. 162 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2018View details →
geo24/100

Single Cell analysis of the two Human Hematopoietic Stem Cell Populations

GEO Series GSE154931. Homo sapiens. 516 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2021View details →
geo24/100

Parallel Bimodal Single-cell Sequencing of Transcriptome and Chromatin Accessibility (Mouse single cell RNA-Seq mESCs)

GEO Series GSE148268. Mus musculus. 192 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2020View details →
geo24/100

Single-cell transcriptome analysis of cells in mouse hairy melanocytic nevi

GEO Series GSE112722. Mus musculus. 605 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2023View details →
geo24/100

High-Throughput Transcriptome Profiling of Single Nuclei and Single Synapses Using Single-Cell Total-RNA-Seq

GEO Series GSE199346. Homo sapiens; Mus musculus. 87 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.

openGEO-OpenNov 2022View details →
geo24/100

Single cell RNA sequencing immune cells (macrophages, CD4 T and B cells) from male and female mice, at 0,1,2,3 hours after IFNa injection.

GEO Series GSE242117. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2024View details →
geo24/100

MIC-Drop-seq: Scalable single-cell phenotyping of mutant vertebrate embryos

GEO Series GSE315445. Danio rerio. 36 samples. Type: Expression profiling by high throughput sequencing; Other.

openGEO-OpenJan 2026View details →
geo24/100

Early specification of CD8+ T lymphocyte fates during adaptive immunity revealed by single-cell gene expression analyses

GEO Series GSE54321. Mus musculus. 13 samples. Type: Expression profiling by RT-PCR.

openGEO-OpenMar 2014View details →
geo24/100

Single-cell gene expression of a glioma cell line (GL261) cultured adherently or as neurospheres

GEO Series GSE277850. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2025View details →
geo24/100

Reprogram-Seq: A platform for single-cell combinatorial reprogramming [III]

GEO Series GSE117786. Mus musculus. 7 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2018View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

ScienceDex for faculty

Your academic CV and NIH biosketch

Make your CV in your school's format and your NIH biosketch from it, then download both as Word files.