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1,353
datasets available to search
ShareScore release 0.9.0
Dataset results
1,353 results for “single-cell transcriptomics”
A PDX1 cistrome and single-cell transcriptome resource of the developing pancreas
GEO Series GSE201230. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell Transcriptomic Atlas of Gingival Mucosa in Type 2 Diabetes
GEO Series GSE188217. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Comparison of single-nucleus and single-cell transcriptomes in hepatocellular carcinoma tissue
GEO Series GSE210679. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics reveals chemotaxis mediated intra-organ crosstalk during cardiogenesis [ChIP-seq]
GEO Series GSE108961. Mus musculus. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell transcriptomics defines an improved, validated monoculture protocol for differentiation of human iPSCs to microglia
<p><a href="https://www.biorxiv.org/content/10.1101/2022.08.02.502447v1">https://www.biorxiv.org/content/10.1101/2022.08.02.502447v1</a></p>
An isoform-resolution transcriptomic atlas of colorectal cancer from long-read single-cell sequencing
<p>Relavant codes and notebooks for data analysis: <a href="https://github.com/lzx325/CRC-atlas">https://github.com/lzx325/CRC-atlas</a></p>
A Novel Insight Into CRPC Progression and Immune: Evidence From Single-cell Spatial Transcriptome Multi-omics
ClinicalTrials.gov study NCT07154914. IPD Sharing: Not stated. Countries: 0. Publications: 0.
Single-cell transcriptomic characterization of immune cells from livers of wild type and ATF6 transgenic mice
GEO Series GSE243826. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Single-cell and spatial transcriptomics reveal the pathogenesis of chronic granulomatous disease under natural conditions [BMK]
GEO Series GSE271222. Mus musculus. 2 samples. Type: Other.
Single-cell protein-transcriptome atlas of haematopoiesis across the human lifespan
GEO Series GSE247738. Homo sapiens. 62 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell transcriptome of Nicotiana attenuata corolla cells.
GEO Series GSE193464. Nicotiana attenuata. 3 samples. Type: Expression profiling by high throughput sequencing.
Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory cell network in atopic dermatitis [ST]
GEO Series GSE197023. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing.
Single-cell joint analysis of DNA oxidative damage and transcriptome [ATAC-seq]
GEO Series GSE268551. Homo sapiens. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell transcriptome profiling reveals blast cell heterogeneity and identifies novel therapeutic target IKZF2 in t(8;21) acute myeloid leukemia (CUT&Tag)
GEO Series GSE267363. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The single-cell transcriptomic atlas and RORA-mediated 3D epigenomic remodeling in driving corneal epithelial differentiation [Promoter capture Hi-C]
GEO Series GSE248934. Homo sapiens. 4 samples. Type: Other.
Parallel Bimodal Single-cell Sequencing of Transcriptome and Chromatin Accessibility
GEO Series GSE113418. Mus musculus; Homo sapiens. 2576 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
A Single-cell Transcriptomic Atlas of Human Intervertebral Disc
GEO Series GSE160756. Homo sapiens. 7 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics of Caco-2 cells cultured in a human gut-on-a-chip under a mechanodynamic culture condition
GEO Series GSE199796. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Integrative single-cell transcriptome analysis of human pancreatic cancer reveals an intermediate cancer cell population associated with poor prognosis [Spatial]
GEO Series GSE235315. Homo sapiens. 7 samples. Type: Other.
Time-series single-cell transcriptomic profiling of luteal-phase endometrium uncovers dynamic characteristics and its dysregulation in recurrent implantation failures
GEO Series GSE250130. Homo sapiens. 28 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.