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PLATE IA. Natula Gorochov, 1987. (A–L), Natula matsuurai (Sugimoto, 2001): A, Male; B, Female; C, Face with a transverse dark strip near epistomal suture; D, Fifth joint of maxillary palpi hatchet shaped; E, Lateral field of tegmina deeper than lateral lobe of pronotum; F, Hind tibia with 3 pairs of dorsal spines on both sides but largest inner apical spurs as long as or half of basitarsus; G, Fore tibia with oval shaped outer and inner tympanum; H, Harp vein only one, Mirror area occupying half dorsal surface, not divided with a small concentric inner veinlet; I, Pronotum with roundly convex anterior margin; J, Female ovipositor strongly upcurved, half as long as hind femur, three fifth area from base widened and bumpy, with a dorsal groove, cerci as long as ovipositor; K, Male sub-genital plate longer than wide, hind margin narrowly truncated with a small projected median lobe, two styli present; L, Female sub-genital plate roundly triangular. in JHABAR MAL, RAJENDRA NAGAR & R. SWAMINATHAN (2014) Record of Natula matsuurai Sugimoto (Orthoptera: Gryllidae: Trigonidiinae) and other sword-tailed crickets from India. Zootaxa, 3760(3): 458-462.
PLATE IA. Natula Gorochov, 1987. (A–L), Natula matsuurai (Sugimoto, 2001): A, Male; B, Female; C, Face with a transverse dark strip near epistomal suture; D, Fifth joint of maxillary palpi hatchet shaped; E, Lateral field of tegmina deeper than lateral lobe of pronotum; F, Hind tibia with 3 pairs of dorsal spines on both sides but largest inner apical spurs as long as or half of basitarsus; G, Fore tibia with oval shaped outer and inner tympanum; H, Harp vein only one, Mirror area occupying half dorsal surface, not divided with a small concentric inner veinlet; I, Pronotum with roundly convex anterior margin; J, Female ovipositor strongly upcurved, half as long as hind femur, three fifth area from base widened and bumpy, with a dorsal groove, cerci as long as ovipositor; K, Male sub-genital plate longer than wide, hind margin narrowly truncated with a small projected median lobe, two styli present; L, Female sub-genital plate roundly triangular.
Armature formula of P1–P4 as follows: P5 (Fig. 2B). With outer seta of BENP arising from long setophore. Endopodal lobe triangular, reaching middle of exopod; with small spinules along outer margin and at base of inner setae; with five elements – one outer subdistal, one apical and one inner subdistal normal seta, and two inner bifurcate elements. Exopod elongate, 2.8 times as long as wide; with spinules along inner margin and with few proximal outer spinules; with six elements – three outer slender, short setae, two apical elements, of which outermost one shorter, and one inner seta. in Proposal of new genera and species of the subfamily Diosaccinae (Copepoda: Harpacticoida: Miraciidae)
Armature formula of P1–P4 as follows: P5 (Fig. 2B). With outer seta of BENP arising from long setophore. Endopodal lobe triangular, reaching middle of exopod; with small spinules along outer margin and at base of inner setae; with five elements – one outer subdistal, one apical and one inner subdistal normal seta, and two inner bifurcate elements. Exopod elongate, 2.8 times as long as wide; with spinules along inner margin and with few proximal outer spinules; with six elements – three outer slender, short setae, two apical elements, of which outermost one shorter, and one inner seta.
Long-Term Demographic Trends in Prehistoric Italy: climate impacts and regionalised socio-ecological trajectories (dataset and R script)
<p>The present digital archive is the outcome of the paper: <strong>Palmisano, A., Bevan, A., Kabelindde, A., Roberts, N., and Shennan, S., 2021. <a href="https://doi.org/10.1007/s10963-021-09159-3">Long-Term Demographic Trends in Prehistoric Italy: climate impacts and regionalised socio-ecological trajectories</a>. <em>Journal of World Prehistory, 34 (3)</em>, </strong>381-432<strong>.</strong></p> <p>The dataset included here provides a collection of <strong>4,010</strong> radiocarbon dates from <strong>947</strong> archaeological sites for a period spanning between 11,000 and 1500 BP. In addition, the digital archive related to this paper provides reproducible analyses in the form of one script written in R statistical computing language.</p> <p>List of versions:</p> <ul> <li><strong>1.0.</strong> 4 August 2021 - First public release of the dataset on Zenodo. </li> </ul>
Guam is about 30 miles long and 4 to 8 miles wide. The portion of the island northeast of Agana, the capital, is a limestone plateau 200 to 300 feet in elevation. The docks are at Piti, and a channel 2 miles long extends to the ship anchorage in the outer part of Apra Harbor. Heavy lines on the map are automobile roads, broken lines are trails, and heavy broken lines are poor roads. in Map of Guam
Guam is about 30 miles long and 4 to 8 miles wide. The portion of the island northeast of Agana, the capital, is a limestone plateau 200 to 300 feet in elevation. The docks are at Piti, and a channel 2 miles long extends to the ship anchorage in the outer part of Apra Harbor. Heavy lines on the map are automobile roads, broken lines are trails, and heavy broken lines are poor roads.
MAP OF GUA:i\I Guam is about 30 miles long and 4 to 8 miles wide. The portion of the island northeast of Agana, the capital, is a limestone plateau 200 to 300 feet in elevation. The docks are at Piti, and a channel 2 miles long extends to the ship anchorage in the outer part of Apra Harbor. Heavy lines on the map are automobile roads, broken lines are trails, and heavy broken lines are poor roads. in Map of Guam
MAP OF GUA:i\I Guam is about 30 miles long and 4 to 8 miles wide. The portion of the island northeast of Agana, the capital, is a limestone plateau 200 to 300 feet in elevation. The docks are at Piti, and a channel 2 miles long extends to the ship anchorage in the outer part of Apra Harbor. Heavy lines on the map are automobile roads, broken lines are trails, and heavy broken lines are poor roads.
MAP OF GUAM Guam is about 30 miles long and 4 to 8 miles wide. The portion of the island northeast of Agana, the capital, is a limestone plateau 200 to 300 feet in elevation. The docks are at Piti, and a channel 2 miles long extends to the ship anchorage in the outer part of Apra Harbor. Heavy lines on the map are automobile roads, broken lines are trails, and heavy broken lines are poor roads. in Map of Guam
MAP OF GUAM Guam is about 30 miles long and 4 to 8 miles wide. The portion of the island northeast of Agana, the capital, is a limestone plateau 200 to 300 feet in elevation. The docks are at Piti, and a channel 2 miles long extends to the ship anchorage in the outer part of Apra Harbor. Heavy lines on the map are automobile roads, broken lines are trails, and heavy broken lines are poor roads.
Figure 2 in Status of the tiger beetle Cicindela hirticollis Say (Coleoptera: Cicindelidae) in New York City and on Long Island, New York, USA
Figure 2. Adult specimens of Cicindela hirticollis Say collected at Rockaway Beach on Long Island between 1909 and 1932, showing variability in elytral color pattern ranging from the form described as C. h. hirticollis Say (right) to the form described as C. h. rhodensis Calder (left). Specimens in top row are males; specimens in bottom row are females.
Figure 1 in Status of the tiger beetle Cicindela hirticollis Say (Coleoptera: Cicindelidae) in New York City and on Long Island, New York, USA
Figure 1. Historical (circles) and de novo (triangles) survey sites for the tiger beetle Cicindela hirticollis Say in New York City and on Long Island, New York. Open symbols indicate no detection, light gray circles indicate sites not surveyed, and dark gray symbols indicate that at least one adult was detected. Symbols in black indicate large populations (> 40 individuals detected).
TEST DATA for Enhanced protein isoform characterization through long-read proteogenomics
<p>Test data for The detection of physiologically relevant protein isoforms encoded by the human genome is critical to biomedicine. Mass spectrometry (MS)-based proteomics is the preeminent method for protein detection, but isoform-resolved proteomic analysis relies on accurate reference databases that match the sample; neither a subset nor a superset database is ideal. Long-read RNA sequencing (e.g. PacBio, Oxford Nanopore) provides full-length transcript sequencing, which can be used to predict full-length proteins. Here, we describe a long-read proteogenomics approach for integrating matched long-read RNA-seq and MS-based proteomics data to enhance isoform characterization. We introduce a classification scheme for protein isoforms, discover novel protein isoforms, and present the first protein inference algorithm for the direct incorporation of long-read transcriptome data in protein inference to enable detection of protein isoforms that are intractable to MS detection. We have released an open-source Nextflow pipeline that integrates long-read sequencing in a proteomic workflow for isoform-resolved analysis.</p> <p>Companion Repositories:</p> <ol> <li><a href="https://doi.org/10.5281/zenodo.5920817">Long-Read-Proteogenomics Workflow GitHub Repository Release</a></li> <li><a href="https://doi.org/10.5281/zenodo.5920847">Long-Read-Proteogenomics Analysis GitHub Repository Release</a></li> </ol> <p>Companion Datasets</p> <ol> <li><a href="https://zenodo.org/deposit/5703754">Jurkat Samples and Reference Data</a></li> <li><a href="http://10.5281/zenodo.5920920">Long-Read-Proteogenomics Workflow Results using Jurkat Sample data</a></li> </ol> <p>This Repository contains the test data, specifically:</p> <p><a href="https://doi.org/10.5281/zenodo.5234651">TEST Data for Long-Read-Proteogenomics Workflow GitHub Actions</a></p>
Supporting dataset for "Influence of urban forms on -long-duration urban flooding: laboratory experiments and computational analysis"
<p>In this dataset, we provide two parts of data:</p> <p>(1) Figures in format .fig that are included in the main text and supplementary material</p> <p>(2) Experimental datasets for the five configurations, including flow depth, discharge partition, and the flow surface velocity,</p> <p>- the data is written in a .h5 file that can be read by different languages (ex. Python),</p> <p>- a document PDF and a text file are available to visualize the data structure</p> <p>- a code of Python for reading the data in the .h5 file </p> <p> </p>
Red-green opponency in the long visual fibre photoreceptors of brushfoot butterflies (Nymphalidae)
<p>In many butterflies, the ancestral trichromatic insect colour vision, based on UV-, blue- and green-sensitive photoreceptors, is extended with red-sensitive cells. Physiological evidence for red receptors has been missing in Nymphalid butterflies, although some species can discriminate red hues well. In eight species from genera Archaeoprepona, Argynnis, Charaxes, Danaus, Melitaea, Morpho, Heliconius and Speyeria we found a novel class of green-sensitive photoreceptors that have hyperpolarising responses to stimulation with red light. These green-positive, red-negative (G+R–) cells are allocated to positions R1/2, normally occupied by UV and blue-sensitive cells. Spectral sensitivity, polarisation sensitivity and temporal dynamics suggest that the red opponent units (R–) are the basal photoreceptors R9, interacting with R1/2 in the same ommatidia via direct inhibitory synapses. We found the G+R– cells exclusively in butterflies with red-shining ommatidia containing longitudinal screening pigments. The implementation of the red colour channel with R9 is different from Pierid and Papilionid butterflies, where cells R5-8 are the red receptors. The Nymphalid red-green opponent channel and the potential for tetrachromacy seem to have been switched on several times during evolution, balancing between the cost of neural processing and the value of extended colour information.</p>
Fig. 11 in The Use of Molecular Phylogenetic and Morphological Tools to Identify Cryptic and Paraphyletic Species: Examples from the Diminutive Long-fingered Bats (Chiroptera: Miniopteridae: Miniopterus) on Madagascar
Fig. 11. Projections of factor 1 (x-axis) and factor 2 (y-axis) in principal component analysis of A, cranial measurements and B, dental measurements of different diminutive species of Miniopterus from Madagascar, all of which were previously considered to be M. manavi, as well as M. petersoni. Loadings of variables on each axis are shown in table 6.
Fig. 10 in The Use of Molecular Phylogenetic and Morphological Tools to Identify Cryptic and Paraphyletic Species: Examples from the Diminutive Long-fingered Bats (Chiroptera: Miniopteridae: Miniopterus) on Madagascar
Fig. 10. Lateral views of skulls and mandibles of Miniopterus spp. from Madagascar: (above, from left to right) M. manavi (FMNH 194074) from the Grotte de Fandanana, near Fandriana; M. griveaudi (FMNH 169712) from near the Andrafiabe Cave, Ankarana; holotype of M. aelleni (FMNH 173067), from the Canyon d'Antsiroandoa, Ankarana; (below, left) holotype of M. brachytragos (FMNH 175840), from the Forêt d'Ambovonomby, Parc National de Namoroka, Forêt d'Ambovonomby; and (below, right) holotype of M. mahafaliensis (FMNH 173197), from near Mitoho Cave, Parc National de Tsimanampetsotsa. (Photograph taken by J. Weinstein, Field Museum image number Z94488_03d.)
Fig. 8 in The Use of Molecular Phylogenetic and Morphological Tools to Identify Cryptic and Paraphyletic Species: Examples from the Diminutive Long-fingered Bats (Chiroptera: Miniopteridae: Miniopterus) on Madagascar
Fig. 8. Dorsal views of skulls of Miniopterus spp. from Madagascar: (above, from left to right) M. manavi (FMNH 194074) from the Grotte de Fandanana, near Fandriana; M. griveaudi (FMNH 169712) from near the Andrafiabe Cave, Ankarana; holotype of M. aelleni (FMNH 173067), from the Canyon d'Antsiroandoa, Ankarana; below, left) holotype of M. brachytragos (FMNH 175840), from the Forêt d'Ambovonomby, Parc National de Namoroka; and (below, right) holotype of M. mahafaliensis (FMNH 173197), from near Mitoho Cave, Parc National de Tsimanampetsotsa. (Photograph taken by J. Weinstein, Field Museum image number Z94488_01d.)
Fig. 7 in The Use of Molecular Phylogenetic and Morphological Tools to Identify Cryptic and Paraphyletic Species: Examples from the Diminutive Long-fingered Bats (Chiroptera: Miniopteridae: Miniopterus) on Madagascar
Fig. 7. Different views of skull and mandible of the holotype of Miniopterus mahafaliensis (FMNH 173197) collected in the Parc National de Tsimanampetsotsa, 6.5 km NE Efoetse, near Mitoho Cave: (above, left) dorsal view of cranium; (above, right) ventral view of cranium; and (below) lateral view of cranium and mandible. (Photograph taken by John Weinstein, Field Museum image number Z94487_05d.)
Fig. 6 in The Use of Molecular Phylogenetic and Morphological Tools to Identify Cryptic and Paraphyletic Species: Examples from the Diminutive Long-fingered Bats (Chiroptera: Miniopteridae: Miniopterus) on Madagascar
Fig. 6. Photograph of living Miniopterus mahafaliensis captured 6.5 km NE Efoetse, near Mitoho Cave, Parc National de Tsimanampetsotsa (FMNH 173191), taken at the same locality as the holotype (FMNH 173197). Note the gray grizzled hair to the ventrum. (Photograph by Harald Schütz.)
Fig. 5 in The Use of Molecular Phylogenetic and Morphological Tools to Identify Cryptic and Paraphyletic Species: Examples from the Diminutive Long-fingered Bats (Chiroptera: Miniopteridae: Miniopterus) on Madagascar
Fig. 5. Different views of skull and mandible of the holotype of Miniopterus brachytragos (FMNH 175840) collected in the Parc National de Namoroka, Forêt d'Ambovonomby, 26 km NW Andranomavo: (above, left) dorsal view of cranium; (above, right) ventral view of cranium; and (below) lateral view of cranium and mandible. (Photograph taken by John Weinstein, Field Museum image number Z94486_05d.)
Fig. 9 in The Use of Molecular Phylogenetic and Morphological Tools to Identify Cryptic and Paraphyletic Species: Examples from the Diminutive Long-fingered Bats (Chiroptera: Miniopteridae: Miniopterus) on Madagascar
Fig. 9. Ventral views of skulls of Miniopterus spp. from Madagascar: (above, from left to right) M. manavi (FMNH 194074) from the Grotte de Fandanana, near Fandriana; M. griveaudi (FMNH 169712) from near the Andrafiabe Cave, Ankarana; holotype of M. aelleni (FMNH 173067), from the Canyon d'Antsiroandoa, Ankarana; (below, left) holotype of M. brachytragos (FMNH 175840), from the Forêt d'Ambovonomby, Parc National de Namoroka, Forêt d'Ambovonomby; and (below, right) holotype of M. mahafaliensis (FMNH 173197), from near Mitoho Cave, Parc National de Tsimanampetsotsa. (Photograph taken by J. Weinstein, Field Museum image number Z94488_02d.)
Fig. 4 in The Use of Molecular Phylogenetic and Morphological Tools to Identify Cryptic and Paraphyletic Species: Examples from the Diminutive Long-fingered Bats (Chiroptera: Miniopteridae: Miniopterus) on Madagascar
Fig. 4. Right ear and tragus of Miniopterus spp. from Madagascar: A, M. brachytragos (FMNH 175840, holotype), from Parc National de Namoroka, Forêt d'Ambovonomby, 26 km NW Andranomavo; B, M. brachytragos (FMNH 172685) from the Forêt de Binara, near Analamazava River, 7.5 km SW Daraina (village); C, M. brachytragos (FMNH 202523) from 1.8 km S Ambanizana, Masoala Peninsula; D, M. mahafaliensis (FMNH 173197, holotype) from Parc National de Tsimanampetsotsa, 6.5 km NE Efoetse, near Mitoho Cave; E, M. mahafaliensis (FMNH 176101) from Parc National de Kirindy-Mite, near village of Betakilotra, 11 km SE Marofihitsa; F, M. griveaudi (FMNH 184055) from Beloboka, grotte n°1, 12.5 km E Mahajanga, Madagascar; G, M. aelleni (FMNH 175842) from the Parc National de Namoroka, Forêt d'Ambovonomby, 26 km NW Andranomavo. The slightly elongated and pointed distal portion of the tragus in FMNH 175840 (A), as compared to FMNH 172685 and FMNH 202523, maybe an anomalous shape in M. brachytragos.
Fig. 1 in The Use of Molecular Phylogenetic and Morphological Tools to Identify Cryptic and Paraphyletic Species: Examples from the Diminutive Long-fingered Bats (Chiroptera: Miniopteridae: Miniopterus) on Madagascar
Fig. 1. Map of Madagascar showing localities mentioned in the text and sites where specimens of Miniopterus brachytragos sp. nov., M. mahafaliensis sp. nov., M. manavi sensu stricto, M. petersoni, M. griveaudi, and M. aelleni have been collected. The latter two species are also known from the Comoro Archipelago (Goodman et al., 2009b). The species symbols for the sites of Namoroka and Bemaraha have been slightly spread out to avoid obscuring information.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.