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2,063
datasets available to search
ShareScore release 0.9.0
Dataset results
2,063 results for “single cell transcriptomics”
Single-cell RNA transcriptome reveals embryonic origin of offspring fibrosis due to maternal obesity
GEO Series GSE278631. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Defining Inflammatory Cell States in Acute and Chronic Pulmonary Infection with Pseudomonas aeruginosa by Single-Cell Transcriptomics
GEO Series GSE192890. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics reveals widespread heterogeneity in gene regulation and RNA processing in stimulated immune cells
GEO Series GSE41265. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.
Single cell transcriptome profiling of Lrig1 quiescent stem cell populations
GEO Series GSE298629. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome and cell-specific network analysis reveal the reparative effect of NT-4 supplementation in preantral follicles grown in vitro
GEO Series GSE177031. Mus musculus. 19 samples. Type: Expression profiling by high throughput sequencing.
Joint single-cell profiling of Cas9 edits and transcriptomes reveals on- and off-target effects on gene expression
GEO Series GSE314191. Homo sapiens. 26 samples. Type: Expression profiling by high throughput sequencing; Other.
Single cell transcriptomics reveals colonic lymphocyte remodelling and emergence of polyfunctional, cytolytic lymphocyte responses in CPI-induced colitis
GEO Series GSE222959. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics of neuroblastoma tumors
GEO Series GSE253865. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing; Other.
Coupled electrophysiological recording and single-cell transcriptome analyses revealed molecular mechanisms underlying neuronal maturation
GEO Series GSE77564. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing.
Spatial charting of single-cell transcriptomes in tissues
GEO Series GSE181254. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic profiling reveals distinct mechanical responses between normal and diseased tendon progenitor cells
GEO Series GSE150482. Homo sapiens; synthetic construct. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics of non-functioning and functioning PitNET subtypes reveals differences in the tumor microenvironment and tumor-specific gene expression signatures that correlate with aggre
GEO Series GSE244101. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
Colorectal cancer stem cell states uncovered by simultaneous single-cell analysis of transcriptome and telomeres
GEO Series GSE163974. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Illumina SBS sequencing and DNBSEQ perform similarly for single-cell transcriptomics
GEO Series GSE277740. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
High-throughput error corrected Nanopore single cell transcriptome sequencing
GEO Series GSE130708. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Functional In vivo Recording and Single-cell Transcriptome Analysis Reveals Molecular Properties of Light-Sensitive Neurons in Mouse V1
GEO Series GSE115997. Mus musculus. 63 samples. Type: Expression profiling by high throughput sequencing.
Single cell- Cluster-RNA seq and Spatial Transcriptomics from the trunk of mouse embryos of different genotypes (wild type, Pax2-GFP, Pax2-GFP; Gata3 knockout) and developmental stages (E8.75, E9.5, E
GEO Series GSE160137. Mus musculus. 4 samples. Type: Other; Expression profiling by high throughput sequencing.
Single-cell transcriptomics reveal diverging pathobiology and opportunities for precision targeting in scleroderma -associated versus idiopathic PAH
GEO Series GSE293580. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Droplet-based high-throughput 3D genome structure mapping of single cells with simultaneous transcriptomics (cell-line)
GEO Series GSE285230. Homo sapiens; Mus musculus. 6 samples. Type: Other.
Single-cell transcriptomic atlas of FACS-sorted mouse muscle tissue cells
GEO Series GSE143435. Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.