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1,353
datasets available to search
ShareScore release 0.9.0
Dataset results
1,353 results for “single-cell transcriptomics”
Single-cell transcriptome comparison of myeloid cells’ in the retina in response to transplantation of human stem-cell derived neurons and to ocular damage reveals the reversibility of the microglia a
GEO Series GSE285564. Homo sapiens; Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Whole-transcriptome profiling of laser-capture microdissected striatal neurons at single-cell resolution using retrograde tracing
GEO Series GSE93003. Rattus norvegicus. 5 samples. Type: Expression profiling by high throughput sequencing.
Single-cell analysis reveals transcriptomic difference between human hypertrophic scar and keloid
GEO Series GSE243716. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic profiling of lung and mediastinal lymph node from SARS-CoV-2 Omicron-infected cynomolgus macaques
GEO Series GSE303075. Macaca fascicularis. 12 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics reveals diverse and complex gene expression alterations in human fetal spinal cord [scRNAseq]
GEO Series GSE215851. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic atlas of glial cells in adult mouse dorsal root ganglia identifies multipotent progenitors
GEO Series GSE317728. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Precisely controlled cell-cell interactions with single-cell transcriptome readout identify a time-demand threshold response of human oncolytic NK cells
GEO Series GSE214129. Homo sapiens. 447 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics reveals diverse and complex gene expression alterations in human fetal spinal cord
GEO Series GSE234219. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell transcriptomic analysis reveals distinct cellular responses of cortical progenitors and neurons in human brain organoid modeling fetal hypoxic brain injury
GEO Series GSE285074. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics of Smad4fl/fl and Smad4fl/fl;Rosa26-creERT2 (Smad4iko) mice.
GEO Series GSE276257. Mus musculus. 7 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics of mouse wildtype and Hoxa2-/- pharyngeal arches 1 and 2 at E10.5.
GEO Series GSE164108. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Low-input, deterministic profiling of single-cell transcriptomes reveals individual intestinal organoid subtypes comprised of single, dominant cell types [HEK Kinetic]
GEO Series GSE183689. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.
Mass spectrometry imaging and single-cell transcriptome reveal metabolic profiles of the postauricular glands of the Bufo gargarizans, and hypothesize Bufotoxin biosynthesis pathways
GEO Series GSE261560. Bufo gargarizans. 1 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome landscape suggests novel fingerprint of relapse in acute monocytic leukemia post transplantation
GEO Series GSE201966. Homo sapiens. 7 samples. Type: Expression profiling by high throughput sequencing.
scHiCAR: a tri-modal single-cell genomics technology for integrated transcriptome, epigenome, and 3D genome analysis in complex tissue [mouse_brain_bulk_HiCAR]
GEO Series GSE267118. Mus musculus. 9 samples. Type: Other.
Single-cell transcriptomics reveals distinct molecular alterations of human renal cell carcinoma-derived endothelial cells that are stable in ex vivo primary culture [scRNA-seq]
GEO Series GSE237425. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
scHiCAR: a tri-modal single-cell genomics technology for integrated transcriptome, epigenome, and 3D genome analysis in complex tissues [mouse_brain_scHiCAR_2]
GEO Series GSE267126. Mus musculus. 80 samples. Type: Expression profiling by high throughput sequencing; Other.
Transcriptomics of single-cell and bulk sorted and micro-dissected mouse bone marrow, fetal liver and small intestine crypt cells
GEO Series GSE89379. Mus musculus. 45 samples. Type: Expression profiling by high throughput sequencing.
spaTransfer: transfer learning for single-cell and spatial transcriptomics data using non-negative matrix factorization
GEO Series GSE317379. Homo sapiens. 2 samples. Type: Other.
Single-cell transcriptome analysis of tumor infiltrated CD45+ immune cells isolated from ctrl- or thonzonium bromide- treated mice
GEO Series GSE240681. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.