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Dataset results
1,335 results for “Oxidative stress.”
Genome-wide analysis of ADP-ribosylation by ADPr-ChAP reveals its association with chromatin after oxidative stress
GEO Series GSE69885. Homo sapiens. 7 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Dietary heme induces instantaneous oxidative stress but delayed cytotoxicity and compensatory hyperproliferation in mouse colon
GEO Series GSE40671. Mus musculus. 9 samples. Type: Expression profiling by array.
Expression data from murine embryonic stem (ES) cells exposed to oxidative stress
GEO Series GSE18708. Mus musculus. 12 samples. Type: Expression profiling by array.
PML is a ROS sensor activating p53 upon oxidative stress
GEO Series GSE100617. Homo sapiens; Mus musculus. 30 samples. Type: Expression profiling by array.
Role of nuclear p38 in the transcriptional response to oxidative stress in Drosophila (ChIP-Seq)
GEO Series GSE220758. Drosophila melanogaster. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Human iPSC-derived astrocytes from ALS patients with mutated C9ORF72 show increased oxidative stress and neurotoxicity
GEO Series GSE142730. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Expression data for Saccharomyces cerevisiae oxidative stress response
GEO Series GSE7645. Saccharomyces cerevisiae. 48 samples. Type: Expression profiling by array.
Oxidative stress time-course in adipocytes
GEO Series GSE106324. Mus musculus. 32 samples. Type: Expression profiling by array.
A non-classical LysR type transcriptional regulator PA2206 is required for an effective oxidative stress response in Pseudomonas aeruginosa.
GEO Series GSE23367. Pseudomonas aeruginosa. 6 samples. Type: Expression profiling by array.
Spaceflight influences gene expression, photoreceptor integrity, and oxidative stress-related damage in the murine retina
The purpose of this study was to determine whether the spaceflight environment induces oxidative damage on ocular structure and how gene expression profiles change during spaceflight.
Spaceflight influences gene expression, photoreceptor integrity, and oxidative stress related damage in the murine retina (RR-9)
Extended spaceflight has been shown to adversely affect astronaut visual acuity. The purpose of this study was to determine whether spaceflight alters gene expression profiles and induces oxidative damage in the retina. Ten week old adult C57BL/6 male mice were flown aboard the ISS for 35 days and returned to Earth alive. Ground control mice were maintained on Earth under identical environmental conditions. Within 38 (+/−4) hours after splashdown, mice ocular tissues were collected for analysis. RNA sequencing detected 600 differentially expressed genes (DEGs) in murine spaceflight retinas, which were enriched for genes related to visual perception, the phototransduction pathway, and numerous retina and photoreceptor phenotype categories. Twelve DEGs were associated with retinitis pigmentosa, characterized by dystrophy of the photoreceptor layer rods and cones. Differentially expressed transcription factors indicated changes in chromatin structure, offering clues to the observed phenotypic changes. Immunofluorescence assays showed degradation of cone photoreceptors and increased retinal oxidative stress. Total retinal, retinal pigment epithelium, and choroid layer thickness were significantly lower after spaceflight. These results indicate that retinal performance may decrease over extended periods of spaceflight and cause visual impairment. This dataset is from the micro-computed tomography, immunostaining, and histology assays.
miRNA profile of duck duodenum mucosa damage caused by oxidative stress
GEO Series GSE237634. Anas platyrhynchos. 6 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Transcriptome profiling of urothelial cells after exposure to low-grade oxidative stress
GEO Series GSE288905. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Acetylation enhances TET2 function in protecting against abnormal DNA methylation during oxidative stress
GEO Series GSE81428. Homo sapiens. 22 samples. Type: Methylation profiling by genome tiling array; Expression profiling by array.
Sporadic activation of an oxidative stress-dependent NRF2–p53 signaling network in breast epithelial spheroids and premalignancies
GEO Series GSE141228. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic analysis of two 14-3-3 proteins Bmh1 and Bmh2 under osmotic and oxidative stresses in the entomopathogen fungus Beauveria bassiana by using RNA sequencing
GEO Series GSE58688. Beauveria bassiana. 6 samples. Type: Expression profiling by high throughput sequencing.
U2AF1 mutation causes an oxidative stress and DNA repair defect in hematopoietic and leukemic cells
GEO Series GSE282085. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Vascular oxidative stress causes neutrophil arrest in brain capillaries, leading to decreased cerebral blood flow and contributing to memory impairment in a mouse model of Alzheimer’s disease
GEO Series GSE224394. Mus musculus. 17 samples. Type: Expression profiling by high throughput sequencing.
Toxicogenomic effects of nano- and bulk TiO2 particles in the soil nematode Carnorhabditis elegans using juglone as a positive control for oxidative stress
GEO Series GSE59519. Caenorhabditis elegans. 62 samples. Type: Expression profiling by array.
m6A modification of circSPECC1 attenuates age-related macular degeneration by resisting oxidative stress injuries and maintaining lipid metabolism in retinal pigment epithelium
GEO Series GSE197148. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.