Skip to main content
Powered by ShareScore

Find research datasets worth reusing

Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.

800

datasets available to search

ShareScore release 0.9.0

Reset

Dataset results

800 results for “RNA methylation”

Learn how ShareScore rates datasets ↗
geo24/100

Regulation of Promoter and Enhancer Histone Landscape by DNA Methylation in Embryonic Stem Cells (RNA-seq)

GEO Series GSE77003. Mus musculus. 11 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2016View details →
geo24/100

Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability [RNA-Seq]

GEO Series GSE96613. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2018View details →
geo24/100

Dynamics of RNA polymerase II pausing and bivalent histone H3 methylation during neuronal differentiation in brain development

GEO Series GSE93011. Mus musculus. 28 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJul 2017View details →
geo24/100

Ancestral gestational exposure to widely used neonicotinoid thiacloprid leads to global DNA methylation alterations in spermatozoa in three generations of male mice [RNA-Seq]

GEO Series GSE235213. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2023View details →
geo24/100

Genome-wide profiling of DNA methylation at single-base resolution based on MeDIP-bisulfite high-throughput sequencing and ridge regression (RNA)

GEO Series GSE62276. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.

openGEO-OpenOct 2015View details →
geo24/100

DNA methylation entropy as a measure of stem cell replication and aging [RNA-seq]

GEO Series GSE213722. Mus musculus. 24 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2022View details →
geo24/100

COMPASS complexes redundantly regulate gene expression and DNA methylation in Arabidopsis [RNA-seq]

GEO Series GSE206687. Arabidopsis thaliana. 24 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2022View details →
geo24/100

Small RNA mediated DNA (cytosine-5) methyltransferase 1 inhibition leads to aberrant DNA methylation

GEO Series GSE68027. Homo sapiens. 11 samples. Type: Methylation profiling by high throughput sequencing; Expression profiling by high throughput sequencing.

openGEO-OpenApr 2015View details →
geo24/100

Removal of promoter DNA methylation by epigenome editing reverses HBG silencing [RNA-seq]

GEO Series GSE284289. Homo sapiens. 40 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2025View details →
geo24/100

Genome-wide investigation of the dynamic changes of epigenome modifications after DNA methylation editing [RNA-seq]

GEO Series GSE144903. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2020View details →
geo24/100

Crosstalk between the RNA methylation and histone binding activities of MePCE regulates P-TEFb activation on chromatin

GEO Series GSE108830. Homo sapiens. 19 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2018View details →
geo24/100

maize DDM1 targets RNA-directed DNA methylation on active chromatin

GEO Series GSE162678. Zea mays. 28 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.

openGEO-OpenDec 2020View details →
geo24/100

Exploring the Role of DNMT1 in RNA m⁵C Methylation (RNA-BS-SEQ DNMT1 knockdown)

GEO Series GSE218053. Homo sapiens. 6 samples. Type: Methylation profiling by high throughput sequencing.

openGEO-OpenMay 2025View details →
geo24/100

Intracellular HIV-1 Tat regulator induces epigenetic changes in the DNA methylation landscape [RNA-seq]

GEO Series GSE282545. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2025View details →
geo24/100

DNA methylation and expression profiles of whole blood in Parkinson’s disease (RNA-Seq)

GEO Series GSE165082. Homo sapiens. 26 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2021View details →
geo24/100

CTCF promotes RNA pol II pausing and links DNA methylation to alternative splicing [ChIP-Seq]

GEO Series GSE31485. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenOct 2011View details →
geo24/100

Chromatin opening by p53 is confined by Trim24 in a histone methylation-dependent manner [RNA-seq]

GEO Series GSE200581. Mus musculus. 49 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2023View details →
geo24/100

2’-O-Methyl-guanosine 3-base RNA fragments mediate essential natural TLR7/8 antagonism

GEO Series GSE291606. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2025View details →
geo24/100

DNA Methylation shapes histone modification landscape for transcription regulation in Arabidopsis [RNA-Seq]

GEO Series GSE183985. Arabidopsis thaliana. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2022View details →
geo24/100

The SNF2 and RING domain proteins FRG1 and 2 are required for RNA-directed DNA methylation in Arabidopsis

GEO Series GSE62801. Arabidopsis thaliana. 25 samples. Type: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.

openGEO-OpenNov 2014View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

ScienceDex for faculty

Your academic CV and NIH biosketch

Make your CV in your school's format and your NIH biosketch from it, then download both as Word files.