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617 results for “base population”
Data for Survival probabilities of atmospheric particles: comparison based on theory, cluster population simulations, and observations in Beijing
<p>Data for<em> Survival probabilities of atmospheric particles: comparison based on theory, cluster population simulations, and observations in Beijing </em>(https://doi.org/10.5194/acp-2022-484)</p> <p>Contact Santeri Tuovinen (santeri.tuovinen@helsinki.fi) for more details.</p>
Fig. 1 in Genetic Diversity In Peripheral And Central Populations Of Rusty-Necklaced Partridge (Alectoris Magna) Based On Mitochondrial And Microsatellite Dna
Fig. 1. Rusty-necklaced partridge sampling sites: 1 = Lanzhou, 2 = Jingyuan, 3 = Haiyuan, 4 = Dingxi, 5 = Huining, 6 = Wushan, 7 = Beidao, 8 = Lixian
Fig. 1 in Golden jackal (Canis aureus Linnaeus, 1758) and Red fox (Vulpes vulpes Linnaeus, 1758) population dynamics in Sarnena Sredna Gora Mts., Bulgaria based on hunting statistics
Fig. 1. Golden jackal (Canis aureus L.) and Red fox (Vulpes vulpes L.) population dynamics trends in Sarnena Sredna Gora Mts., Bulgaria, for a period of 11 years based on the analysis of the hunting data base (number of shot individuals)
Fig. 2 in Genetic diversity and population structure of endangered Neofinetia falcata (Orchidaceae) in South Korea based on microsatellite analysis
Fig. 2. Structure analyses for putative genetic clusters of N. falcata. A: Graphs of ΔK values to determine the ideal number of groups present in the accessions of N. falcata. B: Estimated genetic structure of the 3 populations of brinjal based on STRUCTURE analysis K = 2 and K = 3.
Comparison and Assessment of Family- and Population-based Genotype Imputation Methods in Large Pedigrees Dataset
<p>Here is the data corresponding to the paper "Comparison and Assessment of Family- and Population-based Genotype Imputation Methods in Large Pedigrees" submitted to Genome Research. The data includes the following:<br> <br> Simulated data for 1200 African and European subjects in pedigrees.<br> Lists of subjects selected by each of the 4 subject selection methods examined; Primus, GIGI-Pick, Exome-Picks, and Random selection. <br> <br> The positions of sparse markers for gl_auto for African and European data.<br> <br> The lists of GWAS SNPs for AFR and EUR. </p> <p>Please see the paper for further details of the data generation, this metadata will be updated following publication. </p>
Dataset Validation of seven type 2 diabetes mellitus risk scores in a population-based cohort. The CoLaus Study
<p>This dataset is related to "Validation of seven type 2 diabetes mellitus risk scores in a population-based cohort. The CoLaus Study".</p> <p>Vanessa Kraege*, Janko Fabecic*, Pedro Marques Vidal, Gérard Waeber and Marie Méan</p> <p>*Contributed equally; co-first authors</p>
Text-fig. 5. Distribution of age classes of deningeri bears from Middle Pleistocene deposits from Za Hájovnou Cave (Moravia, the Czech Republic) based on wear stage of M2 dext. and m2 dext. (I–III: juveniles, IV–VII: prime adults, VIII–IX: senile adults; according to Stiner 1998). Juveniles distinctly outnumber adults. in Basic Population And Taphonomic Analysis Of Bear Assemblages From Za Hájovnou Cave (Moravia, The Czech Republic): A Fossil Record From 1987-2007
Text-fig. 5. Distribution of age classes of deningeri bears from Middle Pleistocene deposits from Za Hájovnou Cave (Moravia, the Czech Republic) based on wear stage of M2 dext. and m2 dext. (I–III: juveniles, IV–VII: prime adults, VIII–IX: senile adults; according to Stiner 1998). Juveniles distinctly outnumber adults.
Figure. Phylogram showing phylogenetic relationships estimated using maximum likelihood analysis of 16S rRNA and COXI gene revealed the grouping of Orthochirus iranus, O. farzanpay, O. stockwelli, O. zagrosensis, O. innesi (JQ514244.1 Morocco), and O. bicolor (KT716038.1 India), with the outgroup species Androctonus crassicauda (FJ217732). in A study of genetic diversity among different population of Orthochirus sp. based on cytochrome C oxidase subunit I and 16srRNA sequencing
Figure. Phylogram showing phylogenetic relationships estimated using maximum likelihood analysis of 16S rRNA and COXI gene revealed the grouping of Orthochirus iranus, O. farzanpay, O. stockwelli, O. zagrosensis, O. innesi (JQ514244.1 Morocco), and O. bicolor (KT716038.1 India), with the outgroup species Androctonus crassicauda (FJ217732).
Figure 4 in Microsatellite based genetic diversity of Mediterranean fruit fly (Ceratitis capitata, Diptera: Tephritidae) populations from Southwest Turkey
Figure 4. ΔK distribution along with different values of clusters (K) for 7 populations depending on Evanno's method (Evanno et al. 2005) using Structure Harvester application.
Figure 2 in Microsatellite based genetic diversity of Mediterranean fruit fly (Ceratitis capitata, Diptera: Tephritidae) populations from Southwest Turkey
Figure 2. Unrooted Neighboor-Joinning (NJ) tree of 7 C. capitata populations using 8 polymorphic microsatellite markers.
FIGURE 2 in Population genetics of the endangered catfish Pseudoplatystoma magdaleniatum (Siluriformes: Pimelodidae) based on species-specific microsatellite loci
FIGURE 2 | Results of Structure (A, B) and Discriminant analysis of principal components (C) for Pseudoplatystoma magdaleniatum. A: K = 1; B: K = 2; M: Margento, PC: Punta Cartagena, PB: Puerto Berrío, SN: Samaná Norte.
Figure 2. Phylogenetic relationships among the 29 in Molecular phylogeny and phylogeography of the Greek populations of the genus Orthometopon (Isopoda, Oniscidea) based on mitochondrial DNA sequences
Figure 2. Phylogenetic relationships among the 29 specimens of Orthometopon species. Individuals from two other terrestrial isopod species were used as outgroup taxa: Ligidium sp. and Armadillidium vulgare. Phylogenetic analyses, maximum parsimony (MP), maximum likelihood (ML), and Bayesian inference (BI), all produced trees with the same topology. Only the BI tree is presented here. Numbers above the branches indicate bootstrap values in the MP and ML analyses, respectively (MP/ML). Numbers below the branches indicate the posterior probabilities of the Bayesian analysis (BI).
Figure 1 in Molecular phylogeny and phylogeography of the Greek populations of the genus Orthometopon (Isopoda, Oniscidea) based on mitochondrial DNA sequences
Figure 1. Map showing the sampling localities of the 29 specimens used for the DNA analysis. The numbers correspond to those listed in Table 1.
Evaluating the role of the nuclear microenvironment in gene function by population-based modeling
<p>This repository accompanies the manuscript "<strong>Evaluating the role of the nuclear microenvironment in gene function by population-based modeling</strong>", available in <em>Nature Structural & Molecular Biology</em>.</p> <p>It contains the files for the population of 3D structures for GM12878 in 200-kb resolution generated using IGM (https://github.com/alberlab/igm) and the derived structural features. Please see README.txt for more information.</p> <p>For any inquiries please reach out to Dr. Frank Alber (falber@g.ucla.edu).</p>
Figure 2 in Predatory mites, a green pesticide, and an entomopathogenic compound: A proposed IPM tactic based on pest species diversity indices and population dynamics
Figure 2. Schematic diagram of the experiment's plantation and IPM methodology, C.n: Cydnoseius negevi, A.s: Amblyseius swirskii, and P.p Phytoseiulus persimilis. (Photo credits: Dr. Zidan has created this diagram on www.biorender.com).
Figure 1 in Predatory mites, a green pesticide, and an entomopathogenic compound: A proposed IPM tactic based on pest species diversity indices and population dynamics
Figure 1. Google Earth map photography of the experimental locations (pointed with pin) – i) Om Sabir, Kom Hamada, El Beheira Governorate (30° 29' 50.6" N, 30° 46' 18.8" E), and ii) Kom Oshim, Fayoum Governorate (29° 34' 40.9" N, 30° 55' 38.3" E).
Multi-location trials and population-based genotyping reveal high diversity and adaptation to breeding environments in a large collection of red clover
<p>This dataset accompanies the article with the same title made available on bioRxiv <a href="https://doi.org/10.1101/2022.12.19.520744">https://doi.org/10.1101/2022.12.19.520744</a> </p>
Figure 1 in A NOTE ON SAMPLING CHIRONOMIDS FOR RNA-BASED STUDIES OF NATURAL POPULATIONS THAT RETAINS CRITICAL MORPHOLOGICAL VOUCHERS Abstract
Figure 1. Exemplar RNA extraction QA/QC assessments from the 42 extractions conducted. a) ten extractions analysed using 2% w/v agarose gel electrophoresis: lane 1 contains 1 µL Hyperladder IV (Bioline), lane 2 was intentionally blank, samples are from lanes 3-12; b) exemplar Agilent 2100 Bioanalyzer plot of fragment lengths (x axis) against fluorescence units (y axis). The software automatically attempts to identify the 18S and 28S peaks (labelled below the peak trace in smaller font on an angle) to calculate a RIN.
Illustrating potential effects of alternate control populations on real-world evidence-based statistical analyses
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Sex-based population structure of ectoparasites from Neotropical bats
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.