Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
191
datasets available to search
ShareScore release 0.9.0
Dataset results
191 results for “cis-regulatory element”
Pitx1 broadly associates with limb enhancers and is enriched on hindlimb cis-regulatory elements
GEO Series GSE41591. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Quantitative analysis of cis-regulatory elements in transcription with KAS-ATAC-seq [Mouse KAS-seq]
GEO Series GSE256229. Mus musculus. 26 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CASCADE - Customizable high-throughput platform for profiling cofactor recruitment to DNA to characterize cis-regulatory elements and screen non-coding SNPs
GEO Series GSE148945. Homo sapiens. 38 samples. Type: Other.
Transcription of mammalian cis-regulatory elements is restrained by actively enforced early termination [additional 4C]
GEO Series GSE72958. Mus musculus. 8 samples. Type: Other.
Transcription of mammalian cis-regulatory elements is restrained by actively enforced early termination [RNA]
GEO Series GSE66953. Mus musculus. 28 samples. Type: Expression profiling by high throughput sequencing; Other.
CRISPRi screen of prostate cancer associated risk cis-regulatory elements [RNA-seq]
GEO Series GSE142809. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
UBN1/2 of HIRA complex is responsible for recognition and deposition of H3.3 at cis-regulatory elements of genes in mouse ES cells [ChIP-seq]
GEO Series GSE117034. Mus musculus. 25 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
MAPT expression is mediated by long-range interactions with cis-regulatory elements [RNA_timecourse]
GEO Series GSE228119. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.
CRISPRi screen of prostate cancer associated risk cis-regulatory elements [CRISPRi]
GEO Series GSE142808. Homo sapiens. 12 samples. Type: Other.
Widespread impact of nucleosome remodelers on transcription at cis-regulatory elements [TT-seq]
GEO Series GSE256312. Mus musculus. 97 samples. Type: Expression profiling by high throughput sequencing.
Targeted resequencing of cis-regulatory elements in human leukemia
GEO Series GSE125939. Homo sapiens. 120 samples. Type: Other.
Chromatin dynamics at cis-regulatory elements dictate cell fate identities in early embryos [bulk RNA-seq]
GEO Series GSE289288. Drosophila melanogaster. 18 samples. Type: Expression profiling by high throughput sequencing.
MAPT expression is mediatedd by long-range interactions with cis-regulatory elements.
GEO Series GSE228121. Homo sapiens. 438 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Chromatin dynamics at cis-regulatory elements dictate cell fate identities in early embryos [ChIP-Seq]
GEO Series GSE269361. Drosophila melanogaster. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Chromatin dynamics at cis-regulatory elements dictate cell fate identities in early embryos [CUT&Tag]
GEO Series GSE269367. Drosophila melanogaster. 54 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Addiction-associated genetic variants implicate brain cell type- and region-specific cis-regulatory elements in addiction neurobiology
GEO Series GSE161374. Mus musculus. 35 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
MAPT expression is mediated by long-range interactions with cis-regulatory elements [ATAC-seq]
GEO Series GSE228117. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
CRISPRi screen of prostate cancer associated risk cis-regulatory elements
GEO Series GSE142811. Homo sapiens. 29 samples. Type: Other; Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
UBN1/2 of HIRA complex is responsible for recognition and deposition of H3.3 at cis-regulatory elements of genes in mouse ES cells
GEO Series GSE117035. Mus musculus. 33 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Widespread impact of nucleosome remodelers on transcription at cis-regulatory elements [CUT&RUN]
GEO Series GSE256310. Mus musculus. 43 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.