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181
datasets available to search
ShareScore release 0.9.0
Dataset results
181 results for “de novo assembly”
Data from: De novo assembly of a chromosome-level reference genome of red spotted grouper (Epinephelus akaara) using nanopore sequencing and Hi-C
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Data from: Performance of gene expression analyses using de novo assembled transcripts in polyploid species
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Data from: De novo assembly and comparative analysis of the Ceratodon purpureus transcriptome
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Data from: De novo genome assembly and annotation of rice sheath rot fungus Sarocladium oryzae reveals genes involved in Helvolic acid and Cerulenin biosynthesis pathways
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Data from: De novo assembly and characterization of the transcriptome of the parasitic weed Cuscuta pentagona identifies genes associated with plant parasitism
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Data from: A genes eye view of ontogeny: De novo assembly and profiling of the Gryllus rubens transcriptome
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Data from: De novo transcriptome assembly databases in the butterfly orchid Phalaenopsis equestris
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Data from: De novo assembly and characterization of the Hucho taimen transcriptome
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Data from: De novo genome assembly of Geosmithia morbida, the causal agent of thousand cankers disease
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Data from: De novo transcriptome assembly and polymorphism detection in two highly divergent evolutionary units of Bosca's newt (Lissotriton boscai) endemic to the Iberian Peninsula
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Data from: De novo transcriptome assembly of drought tolerant CAM plants, Agave deserti and Agave tequilana
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A chromosome-scale de novo genome assembly of the dwarf tomato variety Micro-Tom
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Data from: De novo assembly of genomes from long sequence reads reveals uncharted territories of Propionibacterium freudenreichii
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Data from: Evaluation of the impact of RNA preservation methods of spiders for de novo transcriptome assembly
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Data from: Evolutionary history inferred from the de novo assembly of a non-model organism, the blue-eyed black lemur
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Data from: AftrRAD: a pipeline for accurate and efficient de novo assembly of RADseq data
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Data from: A garter snake transcriptome: pyrosequencing, de novo assembly, and sex-specific differences
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RNA Sequencing with de novo assembly of earthworm transcriptome by the treatment of lindane with different exposure and aging duration.
GEO Series GSE118678. Eisenia fetida. 15 samples. Type: Expression profiling by high throughput sequencing.
Deep sequencing and de novo assembly of the mouse oocyte transcriptome define the contribution of transcription to the DNA methylation landscape.
GEO Series GSE70116. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Acute multi-level response to defective de novo chromatin assembly in S-phase
GEO Series GSE262518. Homo sapiens. 72 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.