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314
datasets available to search
ShareScore release 0.7.1
Dataset results
314 results for “genome architecture”
DNA methylation maintains integrity of higher order genome architecture
GEO Series GSE158011. Homo sapiens. 46 samples. Type: Other; Methylation profiling by high throughput sequencing.
Enhancer Chromatin and 3D Genome Architecture Changes from Naive to Primed Human Embryonic Stem Cell States.
GEO Series GSE90680. Homo sapiens. 29 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other; Methylation profiling by high throughput sequencing.
Chromatin architecture in hexaploid wheat is hierarchically organized around genome territories and transcription factories (Wheat_RNAseq)
GEO Series GSE133884. Triticum aestivum. 3 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide reprogramming of transcript architecture by temperature specifies the developmental states of the human pathogen Histoplasma [transcriptional profiling]
GEO Series GSE68706. Histoplasma capsulatum. 16 samples. Type: Expression profiling by high throughput sequencing.
Genomic Interaction Profiles in Breast Cancer Reveal Altered Chromatin Architecture
GEO Series GSE49521. Homo sapiens. 3 samples. Type: Other.
CTCF-Mediated Human 3D Genome Architecture Reveals Chromatin Topology for Transcription
GEO Series GSE72816. Homo sapiens. 6 samples. Type: Other.
The nuclear matrix associating protein HNRNPU functions as a key regulator of 3D genome architecture [ChIP-Seq 1]
GEO Series GSE95113. Mus musculus. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Three-dimensional genome architectural CCCTC-binding factor makes choice in duplicated enhancers at Pcdhα locus
GEO Series GSE147286. Homo sapiens. 74 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
SATB1 Regulates 3D Genome Architecture in T cells by Constraining Chromatin Interactions surrounding CTCF-binding sites [CUT&Tag]
GEO Series GSE198267. Homo sapiens. 14 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genomic architecture of biomass heterosis in Arabidopsis
GEO Series GSE100595. Arabidopsis thaliana. 4 samples. Type: Expression profiling by high throughput sequencing.
3D genomics across the tree of life reveals condensin II as a determinant of architecture type
GEO Series GSE169088. Saccharomyces cerevisiae; Drosophila melanogaster; Gallus gallus; Hypsibius dujardini; Lethenteron camtschaticum; Arachis hypogaea; Agaricus bisporus; Branchiostoma lanceolatum; Xenopus laevis; Notamacropus eugenii; Pygocentrus nattereri; Cristatella mucedo; Clonorchis sinensis; Chiloscyllium punctatum; Strongylocentrotus purpuratus; Ciona intestinalis; Pleurobrachia bachei; Acropora millepora; Python bivittatus; Triticum aestivum; Caenorhabditis elegans; Aplysia californica; Aedes aegypti; Culex quinquefasciatus; Homo sapiens; Muntiacus reevesi; Muntiacus muntjak. 32 samples. Type: Other.
Genome-wide interference of chromatin architecture and Mediator in transcriptional bursting and gene network regulation
GEO Series GSE241338. Homo sapiens; Mus musculus. 250 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
SATB2 organizes the 3D genome architecture of cognition in cortical neurons [Hi-C]
GEO Series GSE222606. Mus musculus. 12 samples. Type: Other.
Primate genome architecture linked with formation mechanisms and functional consequences of structural variation
GEO Series GSE45741. Macaca mulatta; Pan troglodytes; Pongo pygmaeus; Pongo abelii. 30 samples. Type: Genome variation profiling by genome tiling array.
DNA methylation maintains integrity of higher order genome architecture (single cell Repli-Seq)
GEO Series GSE158009. Homo sapiens. 4 samples. Type: Other.
SATB1 Regulates 3D Genome Architecture in T cells by Constraining Chromatin Interactions surrounding CTCF-binding sites
GEO Series GSE199007. Homo sapiens; Mus musculus. 36 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
The coding and noncoding architecture of the Caulobacter crescentus genome
GEO Series GSE54883. Caulobacter vibrioides NA1000. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
Heterochromatin protein 1 alpha (HP1α) undergoes a monomer to dimer transition that opens and compacts live cell genome architecture
GEO Series GSE272234. Homo sapiens. 6 samples. Type: Other.
Phenotypic plasticity shapes genome architecture in the honeybee Apis mellifera (RNA-seq)
GEO Series GSE120561. Apis mellifera. 6 samples. Type: Expression profiling by high throughput sequencing.
SATB2 organizes the 3D genome architecture of cognition in cortical neurons [CUT&RUN]
GEO Series GSE222608. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.