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409
datasets available to search
ShareScore release 0.9.0
Dataset results
409 results for “genome organization”
Genome structure and organization in mouse CD8 T cells [Hi-C-seq]
GEO Series GSE85515. Mus musculus. 3 samples. Type: Other.
Tunable DNMT1 degradation reveals cooperation of DNMT1 and DNMT3B in regulating DNA methylation dynamics and genome organization (Hi-C).
GEO Series GSE251934. Homo sapiens. 7 samples. Type: Other.
Heterochromatic 3D genome organization is directed by HP1a and H3K9-dependent and independent mechanisms[CUT&RUN]
GEO Series GSE236964. Drosophila melanogaster. 51 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
In vitro reconstitution of chromatin domains shows a role for nucleosome positioning in 3D genome organization
GEO Series GSE220647. Saccharomyces cerevisiae. 99 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
OsChz1 acts as a histone chaperone in modulating chromatin organization and genome function in rice
GEO Series GSE155269. Oryza sativa. 34 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.
Regulation of 3D genome organization, transcription and histone H3K9me2 by histone H3K9 methyltransferases [HiC]
GEO Series GSE169103. Mus musculus. 8 samples. Type: Other.
3D genome organization during TGFB-induced transcription requires nuclear microRNA and G-quadruplexes [HICHIP_seq]
GEO Series GSE244950. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Deciphering the role of 3D genome organization in breast cancer susceptibility (Hi-C)
GEO Series GSE184280. Rattus norvegicus. 6 samples. Type: Other.
Genome organization regulates nuclear pore complex formation and promotes differentiation during Drosophila oogenesis
GEO Series GSE250351. Drosophila melanogaster. 37 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
CENP-B cooperates with Set1 in bidirectional transcriptional silencing and genome organization of retrotransposons
GEO Series GSE39404. Schizosaccharomyces pombe. 4 samples. Type: Expression profiling by array.
Three-dimensional analysis of genome organization in CTCF-WT and CTCF-KO dendritic cells
GEO Series GSE185884. Mus musculus. 92 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Canonical Nucleosome Organization at Promoters Forms During Genome Activation
GEO Series GSE44269. Danio rerio. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other; Expression profiling by high throughput sequencing.
Spatial genome organization: contrasting views from chromosome conformation capture and fluorescence in situ hybridization
GEO Series GSE61814. Mus musculus. 18 samples. Type: Other.
A Constitutive Heterochromatic Region Shapes Genome Organization and Impacts Gene Expression in Neurospora crassa [RNA-Seq]
GEO Series GSE269230. Neurospora crassa. 12 samples. Type: Expression profiling by high throughput sequencing.
Chromosome-level organization of the regulatory genome in the Drosophila nervous system [scATAC-seq]
GEO Series GSE214705. Drosophila melanogaster. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
A Constitutive Heterochromatic Region Shapes Genome Organization and Impacts Gene Expression in Neurospora crassa [Hi-C]
GEO Series GSE269229. Neurospora crassa. 8 samples. Type: Other.
Genome-wide SNP analysis of cutaneous squamous cell carcinomas and actinic keratoses from organ transplant recipients
GEO Series GSE32969. Homo sapiens. 94 samples. Type: Genome variation profiling by SNP array; SNP genotyping by SNP array.
Low-input genomics screening reveals epigenetic pathways that orchestrate nuclear organization in early mouse embryos.
GEO Series GSE278721. Mus musculus. 288 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Genome Wide Characterization of Genome Organization in Mouse ES cells
GEO Series GSE64881. Mus musculus; other sequences. 477 samples. Type: Genome variation profiling by high throughput sequencing; Other.
DamID: Loss of a heterochromatin anchor rescues altered genome organization and EDMD muscle defects triggered by a laminopathy mutation
GEO Series GSE135850. Caenorhabditis elegans. 24 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.