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601 results for “habitat diversity”

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zenodo36/100

Figure 6 in Earthworm diversity and abundance in different habitats at Satyajit Ray Film and Television Institute, Kolkata

Figure 6. Simpsons Diversity Index (1/D) and Margaleff M Base 10 index in different habitats

opencc-by-4.0Jun 2018View details →
zenodo36/100

Figure 4 in Earthworm diversity and abundance in different habitats at Satyajit Ray Film and Television Institute, Kolkata

Figure 4. Number of earthworm species and genera in different habitats.

opencc-by-4.0Jun 2018View details →
zenodo36/100

Figure 1 in Earthworm diversity and abundance in different habitats at Satyajit Ray Film and Television Institute, Kolkata

Figure 1. Abundance of earthworm species in bank of water bodies.

opencc-by-4.0Jun 2018View details →
zenodo36/100

Fig. 4 in Wild bees (Anthophila) of Porto Santo (Madeira Archipelago) and their habitats: species diversity, distribution patterns and bee-plant network *

Fig. 4: Bipartite graph of the bee-plant network of Porto Santo.

opencc-by-4.0Dec 2018View details →
zenodo36/100

Fig. 1 in Diel Variations And Diversity Of Fish Communities Along The Unreclaimed Shallow Coastal Habitats Of Changi Point Beach, Singapore

Fig. 1. Map of study area showing site by name (CPB: Changi Point Beach)

opencc-by-4.0Feb 2010View details →
zenodo36/100

Fig. 3 in Diversity And Assemblage Patterns Of Juvenile And Small Sized Fishes In The Nearshore Habitats Of The Gulf Of Thailand

Fig. 3. Species richness of fish samples in each habitat during the study period.

opencc-by-4.0Aug 2013View details →
dryad36/100

Data for: Effects of habitat management on rodent diversity, abundance, and virus infection dynamics

<p>As anthropogenic factors continue to degrade natural areas, habitat management is needed to restore and maintain biodiversity. However, the impacts of different habitat management regimes on ecosystems have largely focused on vegetation analyses, with limited evaluation of downstream effects on wildlife. We compared the effects of grassland management regimes (prescribed burning, cutting/haying, or no active management) on rodent communities and the viruses they hosted. Rodents were trapped in 13 existing grassland sites in Northwest Arkansas, USA during 2020 and 2021. Rodent blood samples were screened for antibodies against three common rodent-borne virus groups: orthohantaviruses, arenaviruses, and orthopoxviruses. We captured 616 rodents across 5953 trap nights. Burned and unmanaged sites had similarly high abundance and diversity, but burned sites had a higher proportion of grassland species than unmanaged sites; cut sites had the highest proportion of grassland species but the lowest rodent abundance and diversity. A total of 38 rodents were seropositive for one of the three virus groups (34 orthohantavirus, three arenavirus, and one orthopoxvirus). Thirty-six seropositive individuals were found in burned sites, and two orthohantavirus-seropositive individuals were found in cut sites. Cotton rats and prairie voles, two grassland species, accounted for 97% of the rodents seropositive for orthohantavirus. Our study indicates that prescribed burns lead to a diverse and abundant community of grassland rodent species when compared to other management regimes; as keystone taxa, these results also have important implications for many other species in food webs. Higher prevalence of antibodies against rodent-borne viruses in burned prairies shows an unexpected consequence likely resulting from robust host population densities supported by the increased habitat quality of these sites. Ultimately, these results provide empirical evidence that can inform grassland restoration and ongoing management strategies.</p>

opencc-zeroApr 2023View details →
dryad36/100

Effective management for deadwood-dwelling lichen diversity requires landscape-scale habitat protection

<ol> <li>Habitat loss is considered a major threat for biodiversity. However, the scales on which its effects occur are still insufficiently understood, namely, is the amount of available habitat important for species richness on both local and landscape scales? We studied the effects of local and landscape-scale habitat amount on local-scale species density of deadwood-dependent lichens in Swedish boreal forests. Creation and retention of dead wood are common practices to benefit forest biodiversity, and recognizing the relevant scale is critical for them to be successful.</li> <li>We surveyed deadwood-dependent lichens in 90 unmanaged forest stands that differed in the local and landscape habitat amount. The local habitat amount was measured as the amount of dead wood in the sampled stands (m<sup>2</sup> dead wood/ha), while six alternative proxies were used to estimate the landscape habitat amount, i.e., the amount of dead wood in the landscapes surrounding the sampled forest stands. Lichen species density (number of species per standardized dead wood area of 3.7 m<sup>2</sup>) was modelled as a function of local habitat amount and landscape habitat amount at multiple scales (300 m – 5 km from the stands).</li> <li>We found that lichen species density increased with the landscape habitat amount. The proportion of old forests (&gt; 100 years, including newly clear-cut stands that until recently were old forests) within 5 km from the studied stands explained species density better than the other proxies of landscape habitat amount. Local dead wood amount did not affect species density, and there was no interaction between the local and landscape habitat amount. </li> <li> <em>Synthesis and applications</em>: To promote the conservation of deadwood-dependent lichens, the amount of old forests in managed forest landscapes should be maintained or increased. A certain amount of dead wood hosted more lichen species when situated in a landscape with more old forest, while there was no effect of the local dead wood amount. This suggests that management aimed at increasing the local species density of deadwood-dwelling lichens should focus on creating and maintaining habitat in the surrounding landscape rather than on only adding deadwood to that local site. In other words, effective management for deadwood-dependent lichen diversity requires landscape-scale habitat protection.</li> </ol>

opencc-zeroApr 2023View details →
dryad36/100

Data for: Surrounding landscape, habitat and hybridization dynamics drive population structure and genetic diversity in the Saltmarsh Sparrow (Ammospiza caudacuta)

<p class="MsoNormal">Determining factors that shape a species' population genetic structure is beneficial for identifying effective conservation practices. We assessed population structure and genetic diversity for Saltmarsh Sparrow (<em>Ammospiza caudacuta</em>), an imperiled tidal marsh specialist, using 13 microsatellite markers and 964 individuals sampled from 24 marshes across the breeding range. We show that Saltmarsh Sparrow populations are structured regionally by isolation-by-distance, with gene flow occurring among marshes within ~110-135 km of one another. Isolation-by-resistance and isolation-by-environment also shape genetic variation; several habitat and landscape features are associated with genetic diversity and genetic divergence among populations. Human development in the surrounding landscape isolates breeding marshes, reducing genetic diversity and increasing population genetic divergence, while surrounding marshland and patch habitat quality (proportion high marsh and sea-level-rise trend) have the opposite effect. The distance of the breeding marsh to the Atlantic Ocean also influences genetic variation, with marshes farther inland being more divergent than coastal marshes. In northern marshes, hybridization with Nelson's Sparrow (<em>A. nelsoni</em>) strongly influences Saltmarsh Sparrow genetic variation, by increasing genetic diversity in the population; this has a concomitant effect of increasing genetic differentiation of marshes with high levels of introgression. From a conservation perspective, we found that the majority of population clusters have low effective population sizes, suggesting a lack of resiliency. To conserve the representative breadth of genetic and ecological diversity and to ensure redundancy of populations, it will be important to protect a diversity of marsh types across the latitudinal gradient of the species range, including multiple inland, coastal and urban populations, which we have shown to exhibit signals of genetic differentiation. It will also require maintaining connectivity at a regional level, by promoting high marsh habitat at the scale of gene flow (~130 km), while also ensuring "stepping stone" populations across the range.   </p>

opencc-zeroJul 2023View details →
dryad36/100

Avian species functional diversity and habitat use the role of forest structural attributes and tree diversity in the Midlands Mistbelt forests of KwaZulu-Natal, South Africa

<p><span>Forest transformation has major impacts on biodiversity and ecosystem functioning. Identifying the influence of forest habitat structure and composition on avian functional communities is important for conserving and managing forest systems. This study investigated the effect of forest structure and composition characteristics on bird species community structure, habitat use, and functional diversity in 14 Mistbelt forest patches of the Midlands of KwaZulu-Natal in South Africa. We surveyed bird communities using point counts. We quantified bird functional diversity for each forest patch using three diversity indices: functional richness, functional evenness, and functional divergence. We further assessed species-specific responses by focusing on three avian forest specialists, orange ground-thrush </span><span><em>Geokichla</em> <em>gurneyi</em></span><span>, forest canary </span><span><em>Crithagra</em> <em>scotops</em></span><span>, and Cape parrot </span><span><em>Poicephalus</em> <em>robustus</em></span><span>. We found that bird community and forest-specialist species responses to forest structure and tree species diversity differed. Also, forest structural complexity, canopy cover, and tree species richness were the main forest characteristics better at explaining microhabitat influence on bird functional diversity. Forest patches with relatively high structural complexity and tree species richness had higher functional richness. Different structural characteristics influenced habitat use by the three forest specialists. Tree species diversity influenced </span><em><span>C. scotops</span> </em><span>and</span><em><span> G. </span><span>gurneyi</span></em><span> positively, </span><span>while </span><em><span>P. robustus</span></em><span> responded negatively to forest patches with high tree species richness. </span><span>Our study showed that site-scale forest structure and composition characteristics are important for bird species richness and functional richness. Forest patches with high tree species diversity and structural complexity should be maintained to conserve forest specialists, bird species richness, and functional richness. </span></p>

opencc-zeroAug 2023View details →
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Fig. S3 in High Genetic Diversity of Amoebae Belonging to the Genus Mayorella (Amoebozoa, Discosea, Dermamoebida) in Natural Habitats

Fig. S3

opencc-by-4.0Dec 2018View details →
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Fig. S1 in High Genetic Diversity of Amoebae Belonging to the Genus Mayorella (Amoebozoa, Discosea, Dermamoebida) in Natural Habitats

Fig. S1

opencc-by-4.0Dec 2018View details →
dryad36/100

Data from: Promoting plant diversity and habitat heterogeneity through vineyard terracing

<p><strong><span>Questions</span></strong><span>:</span> <span>Viticulture on steep slopes has shaped landscape and biodiversity in many regions, but insufficient profitability has led to management cessation and shrub encroachment. A solution to maintain cultivation economically viable could be vineyard terracing. We aimed </span><span>to identify the potential of terracing to enhance plant diversity and habitat heterogeneity in vineyards, analyse effects of management intensity on vineyard vegetation, and assess how </span><span>plant communities change after vineyard abandonment.</span></p> <p><span><strong>Location</strong>:</span><span> Wine-growing region of the Upper Middle Rhine Valley in Hesse (50.042342°N, 7.814533°E) and Rhineland-Palatinate (50.119139°N, 7.719275°E), Germany.</span><span>            </span></p> <p><span><strong>Methods</strong>:</span><span> We recorded vascular plant species and local vineyard parameters in vertically oriented vineyards with vegetated and tilled open inter-rows, in terraced vineyards with tilled terrace inter-rows and extensively managed embankments and in vineyard fallows in a total of 45 study sites. We used plant species richness, Ellenberg indicator values and Grime's strategy types to describe how traits and ecological requirements respond to distinct vineyard management.</span><span>   </span></p> <p><span><strong>Results</strong>:</span><span> Plant species richness and composition were determined by management-derived disturbance intensities. Extensively managed embankments had a distinct plant community, the highest plant species richness, more perennial and indicator species, and lower nitrogen indicator values compared to inter-rows. In contrast, highly disturbed open and terrace inter-rows revealed plant communities associated with annuals and ruderals, but species richness did not differ between terrace inter-rows and embankments. Plant communities of fallows were completely different with lower plant diversity. </span><span>       </span></p> <p><span><strong>Conclusions</strong>:</span> <span>Our results highlight the potential of terraced vineyards for plant diversity with nutrient-poor, extensively managed embankments providing conditions that have become rare in modern agricultural systems. A long environmental gradient from terrace inter-rows to embankments created habitat heterogeneity at a narrow space. In contrast, intensive inter-row management in vertically oriented vineyards hampers high plant diversity and abandonment</span><span> fosters the spread of woody species at the expanse of plant diversity.</span></p>

opencc-zeroOct 2023View details →
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Habitat simplification affects functional group structure along with taxonomic and phylogenetic diversity of temperate-zone ant assemblages over a ten-year period

Open the record for dataset details and reuse information.

publicJan 2024View details →
dryad36/100

Data from: Links between plant and fungal diversity in habitat fragments of coastal shrubland

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publicSep 2018View details →
dryad36/100

The interacting effect of habitat amount, habitat diversity and fragmentation on insect diversity along elevational gradients.

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publicOct 2020View details →
dryad36/100

Forest habitat parameters influence abundance and diversity of cadaver-visiting dung beetles in Central Europe

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publicFeb 2020View details →
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Increasing agricultural habitat reduces solitary bee offspring number and weight in apple orchards through reduced floral diet diversity and increased fungicide risk

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publicFeb 2020View details →
dryad36/100

Reduced genetic diversity associated with the northern expansion of an amphibian species with high habitat-specialization, Ascaphus truei, resolved using two types of genetic markers

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publicMar 2022View details →
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Data from: Genome-wide diversity and habitat underlie fine-scale phenotypic differentiation in the rainbow darter (Etheostoma caeruleum)

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publicSep 2020View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record