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647 results for “historical data”
Auxiliary data files for replication of "Augmenting the availability of historical GDP per capita estimates through machine learning"
<p>This repository holds auxiliary data files needed for the replication "Augmenting the availability of historical GDP per capita estimates through machine learning". All further information and data is provided in the <a href="https://github.com/philmkoch/historicalGDPpc" target="_blank" rel="noopener">GitHub repository</a>.</p> <p>The data included in this auxiliary folder is based on the work by Laouenan et al. (https://www.nature.com/articles/s41597-022-01369-4). </p>
Data and Code for "Propagule pressure from historic U.S. plant sales explains establishment but not invasion"
<p>Files used in the creation of "Propagule pressure from historic U.S. plant sales explains establishment but not invasion" manuscript submitted to Ecology Letters.</p>
FIGURE 8 in Description of contents of unopened bamboo corsets and crates from Quarry Ig/WJ of the Tendaguru locality (Late Jurassic, Tanzania, East Africa) as revealed by medical CT data and the potential of this data under paleontological and historical aspects
FIGURE 8. Examples of bone elements from sauropod dinosaurs found in the bamboo corsets, link to corresponding movies. A) "Ig 230", cervical rib of Giraffatitan brancai, and cluster of vertebrae and bone fragments of Dysalotosaurus; B) "Ig 281", presumable dorsal vertebral fragments and pneumatic transverse process of a sauropod (this bamboo corset contains also a dentary remain of Dysalotosaurus); C) "Ig 310, 311, 312, 313, 314", pneumatic transverse process of dorsal vertebra; D) "Ig 498", neural arch with clearly visible hyposphene and broken neural spine of titanosauriform sauropod. Close-up of visualization of isolated MtII of Giraffatitan, E) in dorsal view F) in plantar view. Scale bar in A-D is 100 mm, in E-F it is 50 mm. Abbreviations: bf, bone fragment; ccost, corpus of cervical rib (of Giraffatitan); df, dentary fragment (of Dysalotosaurus); hypo, hyposphene; mt, metatarsal; na, neural arch; nsp, neural spine; prcost, caudal process of cervical rib (of Giraffatitan); postzyg, postzygapophysis; prtrans, transverse process of vertebra; tib,tibia; vc, vertebral centrum; vf, vertebral fragment. Videos of A) to D) available at the PE You Tube channel (https://www.youtube.com/channel/UCF6IBDiGbut- DrVada60Izyg)
FIGURE 6 in Description of contents of unopened bamboo corsets and crates from Quarry Ig/WJ of the Tendaguru locality (Late Jurassic, Tanzania, East Africa) as revealed by medical CT data and the potential of this data under paleontological and historical aspects
FIGURE 6. Examples of bone elements from Dysalotosaurus lettowvorbecki as found in the bamboo corsets, link to corresponding movies. A) "Ig 189, 211, 213", bamboo corset with dentary fragments, dorsal rib shaft, tibia remains, a proximal fibula and some other bone fragments; B) "Ig 401, 415, 416, 417, 472, 475", bamboo corset with well-preserved ilium, proximal fibula, at least two metatarsals and other long bone fragments, as well as a presumed MtII of Giraffatitan brancai in 2 parts; C) "Ig 343, 346, 354, 359, 366, 383", bamboo corset with femur in 3 parts, fragments of ilium and some bone fragments; D) "Ig 335, 336, 338, 368", bamboo corset with 1 humerus, 1 femur, tibia and fibula as proximal parts and other bone fragments; E) "Ig 537, 540, 547, 549, 562", bamboo corset with vertebral centra, 2 isolated neural arches, a coracoid, a distal femur, a metatarsal and other bone fragments; F) "Ig 522, 527, 528, 539, 543, 544", bamboo corset with tibia and fibula, ulna and other bone fragments. Scale bar is 50 mm. Abbreviations: cor, coracoid; df, dentary fragment; dori, dorsal rib; fe, femur; fib, fibula; hu, humerus; ili, ilium; isc, ischium; MtII, second metatarsal of Giraffatitan; mt, metatarsal (of Dysalotosaurus); nar, neural arch; tib, tibia; uln, ulna; vc, vertebral centrum. Videos of A) to F) available at the PE You Tube channel (https://www.youtube.com/channel/UCF6IBDiGbut- DrVada60Izyg)
FIGURE 5. Diagrams showing A in Description of contents of unopened bamboo corsets and crates from Quarry Ig/WJ of the Tendaguru locality (Late Jurassic, Tanzania, East Africa) as revealed by medical CT data and the potential of this data under paleontological and historical aspects
FIGURE 5. Diagrams showing A) the distribution of clay jackets, unprepared bones and tin cans in the bamboo corsets and crates, B) Frequency of different bone elements of Dysalotosaurus lettowvorbecki in the bamboo corsets and crates. The unidentified bone fragments of Dysalotosaurus are not incorporated in this count. Isolated vertebral centra have been counted without determination of their corresponding body region (i.e., cervical, dorsal, sacral, or caudal).
FIGURE 4 in Description of contents of unopened bamboo corsets and crates from Quarry Ig/WJ of the Tendaguru locality (Late Jurassic, Tanzania, East Africa) as revealed by medical CT data and the potential of this data under paleontological and historical aspects
FIGURE 4. Packing types of fossil specimens as visible in the CT images A) "Ig 420, 439, 453, 512", longitudinal section (MIP mode and CT-pulmonary filters set) showing wrapping of specimens in savanna grass, B) "Ig88" cross-section showing wrapping of fossils in savanna grass and tight stuffing of bamboo corsets, C) "Ig291, 291", longitudinal section of the typical clay jackets, showing a femur of Dysalotosaurus in pieces with protection cover of clay, D) "Ig281", partial longitudinal section showing clay jackets and single bone fragments with and without sediment, E) "Ig 122, 124, 266, 267, 269, 270, 272, 276", longitudinal section showing clusters of vertebrae and bone fragments in the bamboo corset, F) "Ig_2011_4", crate with two large sediment slabs with fossil bones, G) "Ig_2011_1", crate with bamboo stalks filled with fossil bones and bones wrapped in savanna grass, H) "Ig_NN6", bamboo corset in longitudinal section (MIP mode) showing tin cans and bone cluster in between (see also Figure 4C-D), I) "Ig 330, 339, 347, 349 350, 351, 352, 356, 360, 346, 366", bamboo corset in longitudinal section (MIP mode) showing several tin cans and some additional loose bones. Scale bar is 50 mm. Abbreviations: bb, bamboo stalk; bf, bone fragment; cl, clay cover of bone; clj, clay jacket; df, dentary fragment; dife, distal femur; sed, sediment; sgb, savanna grass bundle; vc, vertebral centrum.
FIGURE 3. 3D in Description of contents of unopened bamboo corsets and crates from Quarry Ig/WJ of the Tendaguru locality (Late Jurassic, Tanzania, East Africa) as revealed by medical CT data and the potential of this data under paleontological and historical aspects
FIGURE 3. 3D visualization images of containers, showing different content types, link to corresponding movies. A) "Ig88", clay jackets and bones; B) "Ig_2011_5", crate with an accumulation of vertebrae and some other bones. Scale bars in A) and B) are 50 mm. "Ig_NN6", tin cans and small bones in bamboo corset, 3D MIP videos, C) with bamboo corset and surface visualized, D) with content of tin cans visualized. Scale bars in C) and D) are 100 mm. Abbreviations: bc, 3D visualized bamboo corset; bf, bone fragment; clvc, cluster of vertebral centra; clj, clay jacket; tc, tin can; vc, vertebral corpus. Videos of A), B), C) and D) available at the PE You Tube channel (https://www.youtube.com/channel/UCF6IBDiGbut- DrVada60Izyg).
FIGURE 2 in Description of contents of unopened bamboo corsets and crates from Quarry Ig/WJ of the Tendaguru locality (Late Jurassic, Tanzania, East Africa) as revealed by medical CT data and the potential of this data under paleontological and historical aspects
FIGURE 2. Photographs of packing and transport of bamboo corsets on the Tendaguru hill, A) MfN HBSB PM_B_IV_0072, and B) MfN HBSB PM_B_V_156, local workers producing and filling bamboo corsets, C) MfN HBSB PM_B_V_160, workers have gathered to start their march to Lindi with the bamboo corsets, D) MfN HBSB PM_B_V_168, long column of carriers following the small foot path to Lindi with bamboo corsets either between them or carried on the head. E) Aquilion CX CT scanner at the IZW, this machine was used to scan all 40 bamboo corsets, F) wooden crates from Quarry Ig/WJ on their way through the Toshiba Aquilion One CT scanner at the Charité, photograph by Oliver Wings.
FIGURE 7 in Description of contents of unopened bamboo corsets and crates from Quarry Ig/WJ of the Tendaguru locality (Late Jurassic, Tanzania, East Africa) as revealed by medical CT data and the potential of this data under paleontological and historical aspects
FIGURE 7. Examples of bone elements from Kentrosaurus aethiopicus as found in the bamboo corsets link to corresponding movies. A) "Ig88", bamboo corset with two caudal vertebral centra (one of them with separate neural arch), a haemapophysis, a distal part of humerus, femur and ilium and ischium fragments of Kentrosaurus, and vertebral centra of Dysalotosaurus; B) "Ig 277, 279, 284", remains of one right scapula and humerus and proximal part of left scapula, and tibia of Dysalotosaurus; C) Crate "Ig_2011_1", ulna of Kentrosaurus, and several long bones and bone fragments of Dysalotosaurus. Scale bar is 100 mm. Abbreviations: bf, bone fragment; dife, distal femur; dihu, distal humerus; haem, haemapophysis; hu, humerus; ili, ilium; isc, ischium; scap, scapula; uln, ulna; vc, vertebral centrum. Videos of A) to C) available at the PE You Tube channel (https://www.youtube.com/channel/UCF6IBDiGbut- DrVada60Izyg)
FIGURE 1. A in Description of contents of unopened bamboo corsets and crates from Quarry Ig/WJ of the Tendaguru locality (Late Jurassic, Tanzania, East Africa) as revealed by medical CT data and the potential of this data under paleontological and historical aspects
FIGURE 1. A) Entries in field catalogue of Janensch (1909-1911) for Quarry Ig/WJ page 73 and page 143. Photographs of original packed items from Quarry Ig/WJ.B) clay jacket Ig294, C) tin can filled with small bones from Quarry Ig/WJ and padded with pieces of cotton, scale bar for B) and C) is 50 mm. D) baobab fruit capsule filled with small bones and vertebrae from Quarry Ig/WJ, padded with a bundle of savanna grass, not to scale, E) opened bamboo corset from Quarry Ig/WJ containing four clay jackets (one partially with plaster of paris) on a thick layer of savanna grass (this photograph is also used in Heinrich and Schultka, 2007: Abb. 32), F) Close-up of one of the studied bamboo corsets in the collection of the MfN with original ink labelling and paper label visible, scale bar for E) and F) is 80 mm. G) Section of several bamboo corsets as stored at the collection of the MfN, not to scale. Photographs B) to E) by Carola Radke, and photographs F) and G) by Hwa Ja Götz, both MfN.
Historical NCI Genomic Data Commons data (09-14-2017)
<p>Historical NCI Genomic Data Commons data (v09-14-2017). Clinical ('phenotype') and gene expression (HTSeq FPKM-UQ).</p> <p> </p> <p><strong><a href="https://xenabrowser.net/datapages/?dataset=TCGA-COAD/Xena_Matrices/TCGA-COAD.GDC_phenotype.tsv&host=https://gdc.xenahubs.net">TCGA-COAD.GDC_phenotype.tsv</a></strong></p> <blockquote> <p>dataset: phenotype - Phenotype</p> <p>cohort<a href="https://xenabrowser.net/datapages/?cohort=GDC%20TCGA%20Colon%20Cancer%20(COAD)">GDC TCGA Colon Cancer (COAD)</a><br> dataset IDTCGA-COAD/Xena_Matrices/TCGA-COAD.GDC_phenotype.tsv<br> download<a href="https://gdc.xenahubs.net/download/TCGA-COAD/Xena_Matrices/TCGA-COAD.GDC_phenotype.tsv.gz">https://gdc.xenahubs.net/download/TCGA-COAD/Xena_Matrices/TCGA-COAD.GDC_phenotype.tsv.gz</a>; <a href="https://gdc.xenahubs.net/download/TCGA-COAD/Xena_Matrices/TCGA-COAD.GDC_phenotype.tsv.json">Full metadata</a><br> samples570<br> version11-27-2017<br> hubhttps://gdc.xenahubs.net<br> type of dataphenotype<br> authorGenomic Data Commons<br> raw data<a href="https://docs.gdc.cancer.gov/Data/Release_Notes/Data_Release_Notes/#data-release-90">https://docs.gdc.cancer.gov/Data/Release_Notes/Data_Release_Notes/#data-release-90</a><br> raw data<a href="https://api.gdc.cancer.gov/data/">https://api.gdc.cancer.gov/data/</a><br> input data formatROWs (samples) x COLUMNs (identifiers) (i.e. clinicalMatrix)<br> 570 samples X 151 identifiers<a href="https://xenabrowser.net/datapages/?host=https%3A%2F%2Fgdc.xenahubs.net&dataset=TCGA-COAD%2FXena_Matrices%2FTCGA-COAD.GDC_phenotype.tsv&allIdentifiers=true">All Identifiers</a><a href="https://xenabrowser.net/datapages/?host=https%3A%2F%2Fgdc.xenahubs.net&dataset=TCGA-COAD%2FXena_Matrices%2FTCGA-COAD.GDC_phenotype.tsv&allSamples=true">All Samples</a></p> </blockquote> <p> </p> <p><strong><a href="https://xenabrowser.net/datapages/?dataset=TCGA-COAD%2FXena_Matrices%2FTCGA-COAD.htseq_fpkm-uq.tsv&host=https%3A%2F%2Fgdc.xenahubs.net">TCGA-COAD.htseq_fpkm-uq.tsv</a></strong></p> <blockquote> <p>dataset: gene expression RNAseq - HTSeq - FPKM-UQ</p> <p>cohort<a href="https://xenabrowser.net/datapages/?cohort=GDC%20TCGA%20Colon%20Cancer%20(COAD)">GDC TCGA Colon Cancer (COAD)</a><br> dataset IDTCGA-COAD/Xena_Matrices/TCGA-COAD.htseq_fpkm-uq.tsv<br> download<a href="https://gdc.xenahubs.net/download/TCGA-COAD/Xena_Matrices/TCGA-COAD.htseq_fpkm-uq.tsv.gz">https://gdc.xenahubs.net/download/TCGA-COAD/Xena_Matrices/TCGA-COAD.htseq_fpkm-uq.tsv.gz</a>; <a href="https://gdc.xenahubs.net/download/TCGA-COAD/Xena_Matrices/TCGA-COAD.htseq_fpkm-uq.tsv.json">Full metadata</a><br> samples512<br> version09-14-2017<br> hubhttps://gdc.xenahubs.net<br> type of datagene expression RNAseq<br> unitlog2(fpkm-uq+1)<br> platformIllumina<br> ID/Gene Mapping<a href="https://gdc.xenahubs.net/download/probeMaps/gencode.v22.annotation.gene.probeMap.gz">https://gdc.xenahubs.net/download/probeMaps/gencode.v22.annotation.gene.probeMap.gz</a>; <a href="https://gdc.xenahubs.net/download/probeMaps/gencode.v22.annotation.gene.probeMap.json">Full metadata</a><br> authorGenomic Data Commons<br> raw data<a href="https://docs.gdc.cancer.gov/Data/Release_Notes/Data_Release_Notes/#data-release-80">https://docs.gdc.cancer.gov/Data/Release_Notes/Data_Release_Notes/#data-release-80</a><br> raw data<a href="https://api.gdc.cancer.gov/data/">https://api.gdc.cancer.gov/data/</a><br> wranglingData from the same sample but from different vials/portions/analytes/aliquotes is averaged; data from different samples is combined into genomicMatrix; all data is then log2(x+1) transformed.<br> input data formatROWs (identifiers) x COLUMNs (samples) (i.e. genomicMatrix)<br> 60,484 identifiers X 512 samples</p> </blockquote>
Downscaled ERA-Interim gridded historical climate data over China (1980-2010)
<p><strong>Gridded historical climate data over China, spanning 1981 to 2010. Dynamically downscaled to 25km resolution using the PRECIS2.0 (HadRM3P) Met Office regional climate model, driven by ERA-Interim reanalysis from the European Centre for Medium-Range Weather Forecasts (ECMWF).</strong></p> <p>This data has been un-rotated to true latitude longitude coordinates from its original rotate pole frame of reference. For more information on the PRECIS regional climate model, visit <a href="http://www.metoffice.gov.uk/precis">www.metoffice.gov.uk/precis</a>. Data near the boundaries should be used with caution due to model configuration aspects of regional climate modelling, and the interpolation method applied. Data created as part of the Met Office Climate Science for Service Partnership China (<a href="https://www.metoffice.gov.uk/research/collaboration/cssp-china">CSSP China</a>), work package 1 output, supported by the Newton Fund and the Department for Business, Energy & Industrial Strategy (BEIS) <a href="https://www.gov.uk/government/publications/newton-fund-building-science-and-innovation-capacity-in-developing-countries/newton-fund-building-science-and-innovation-capacity-in-developing-countries">UK-China Research Innovation Partnership Fund</a>.</p> <p><strong>Domain</strong>: 17N to 58.84N, 73E to 135.7E</p> <p><strong>Countries covered</strong>: China, Nepal, Bhutan, Bangladesh, Taiwan, Mongolia, North Korea, South Korea, Kyrgzstan, and northern parts of India, Myanmar, Lao PDR & Vietnam.</p> <p><strong>Variables</strong>: pr (mean precipitation flux), tm (mean surface temperature), tn (minimum surface temperature) & tx (maximum surface temperature)</p> <p><strong>Time averaging</strong>: monthly</p> <p> </p> <p><em>This data set supplements the equivalent downscaled 20CRv2c data set: <a href="https://zenodo.org/record/2558135#.XJj2uaD7RWE">Downscaled 20CRv2c (#37) gridded historical climate data over China (1851-2010)</a> doi: 1</em>0.5281/zenodo.2558135</p>
CESM input data for running CESM historic with CAM6 and CLM5 (no ocean) in docker container
<p>CESM docker container for HIST_CAM60_CLM50%BGC_CICE%PRES_DOCN%DOM_MOSART_CISM2%NOEVOLVE_SWAV compset and resolution f19_g17 using <a href="https://bioconda.github.io/recipes/cesm/README.html">bioconda cesm docker</a> as a base image.</p>
Data for "Fertility dynamics through historical pandemics and COVID-19 in Switzerland, 1871-2022"
<p>The data contains the aggregated birth data and the Swiss population figures for total births and several subgroups (Language Region, Swiss vs non-Swiss, etc) . Subgroups have existed since 1987 and the number of parities since 2005. </p>
Climate Watch Historical Country Greenhouse Gas Emissions Data (1990-2018)
<p>Climate Watch Historical Emission data contains sector-level greenhouse gas (GHG) emissions data for 194 countries and the European Union (EU) for the period 1990-2018, including emissions of the six major GHGs from most major sources and sinks. Non-CO2 emissions are expressed in CO2 equivalents using 100-year global warming potential values from IPCC Fourth Assessment Report. See <a href="http://cait.wri.org/docs/CAIT2.0_CountryGHG_Methods.pdf">http://cait.wri.org/docs/CAIT2.0_CountryGHG_Methods.pdf</a> for details regarding data source and methodology.</p> <p> </p> <p>Climate Watch Historical GHG Emissions. 2021. Washington, DC: World Resources Institute. Available online at: <a href="https://www.climatewatchdata.org/ghg-emissions">https://www.climatewatchdata.org/ghg-emissions</a></p>
Data from article "Sea-level rise in Venice: historic and future trends (review article)"
<p>Data from the article Zanchettin D., et al.: Sea-level rise in Venice: historic and future trends (review article), Nat. Hazards Earth Syst. Sci., 21, 1–35, 2021, https://doi.org/10.5194/nhess-21-1-2021</p> <p>The dataset contains:</p> <p>- Historical tide gauge data for Venice (relative sea level, or RSL, and RSL corrected for vertical land movement) for the winter (JFM) and autumn (OND) seasons.</p> <p>- sea-level projections for Venice for the RCP2.6, the RCP8.5 and a high-end scenario.</p>
China's historical 1km resolution eco-environmental quality data (CHEQ)
<p>The China's High-resolution Eco-Environmental Quality (CHEQ) dataset provides 1-km historical eco-environmental quality (EEQ) during years 2001-2019. This dataset archived in TIFF format was jointly developed by Beijing Normal University, Southern University of Science and Technology and Peking University based on multi-source remote sensing data. The dataset covers the entire land of China with a yearly temporal resolution. The existing validation results show that the CHEQ dataset was highly consistent with the environmental index (EI) provided by the Ministry of Ecology and Environment of China. The CHEQ fills the research gap in the field of EEQ monitoring in China.<br> </p>
Data from: Refining the evolutionary time machine: an assessment of whole genome amplification using single historical Daphnia eggs
<p>This dataset contains the original raw sequence files used in the associated publication "Refining the evolutionary time machine: an assessment of whole genome amplification using single historical <em>Daphnia</em> eggs" by O'Grady, Dhandapani, Colbourne & Frisch in Molecular Ecology Resources. DOI:10.1111/1755-0998.13524</p> <p> </p> <p>(filename > name used in associated publication)</p> <p>DF1_ATTACTC-GGCTCTG_L008_R1_001.fastq.gz -> DM1<br> DF2_TCCGGAG-GGCTCTG_L008_R1_001.fastq.gz -> DM2<br> DF3_CGCTCAT-GGCTCTG_L008_R1_001.fastq.gz -> DM3<br> DF4_GAGATTC-GGCTCTG_L008_R1_001.fastq.gz -> DM4<br> DF5_CTGAAGC-GGCTCTG_L008_R1_001.fastq.gz -> DM5<br> DF11_CTGAAGC-AGGCGAA_L008_R1_001.fastq.gz -> DM6<br> DF12_TAATGCG-AGGCGAA_L008_R1_001.fastq.gz -> DM7</p> <p>DF6_TAATGCG-GGCTCTG_L008_R1_001.fastq.gz -> DP1<br> DF7_ATTACTC-AGGCGAA_L008_R1_001.fastq.gz -> DP4<br> DF8_TCCGGAG-AGGCGAA_L008_R1_001.fastq.gz -> DP5<br> DF9_CGCTCAT-AGGCGAA_L008_R1_001.fastq.gz -> DP2<br> DF10_GAGATTC-AGGCGAA_L008_R1_001.fastq.gz -> DP3</p> <p>170426_E00397_0064_BHJ2JWALXX_2_TP-D7-004_1.fastq.gz -> DP6 (fw)<br> 170426_E00397_0064_BHJ2JWALXX_2_TP-D7-004_2.fastq.gz -> DP6 (rv)<br> 170426_E00397_0064_BHJ2JWALXX_2_TP-D7-010_1.fastq.gz -> DP7 (fw)<br> 170426_E00397_0064_BHJ2JWALXX_2_TP-D7-010_2.fastq.gz -> DP7 (rv)</p> <p>170426_E00397_0064_BHJ2JWALXX_2_TP-D7-005_1.fastq.gz -> DP8 (fw)<br> 170426_E00397_0064_BHJ2JWALXX_2_TP-D7-005_2.fastq.gz -> DP8 (rv)<br> 170426_E00397_0064_BHJ2JWALXX_2_TP-D7-006_1.fastq.gz -> DP9 (fw)<br> 170426_E00397_0064_BHJ2JWALXX_2_TP-D7-006_2.fastq.gz -> DP9 (rv)</p>
Wood Buffalo Environmental Association (WBEA) Historical Monitoring Data used in "Passive Tracer Modelling at Super-Resolution with WRF-ARW to Assess Mass-Balance Schemes"
<p>Wood Buffalo Environmental Association (WBEA) Historical Monitoring Data from two monitoring stations Bertha Ganter – Fort McKay and Barge Landing for 20 August 2013 to 2 September 2013. This data was used in "Passive Tracer Modelling at Super-Resolution with WRF-ARW to Assess Mass-Balance Schemes" (Fathi et al., 2022 - egusphere-2022-1125) for model output and observational data comparisons. The same data can be accessed and downloaded from "<a href="https://wbea.org/historical-monitoring-data/">https://wbea.org/historical-monitoring-data/</a>".</p>
Data set: historical and ethno-linguistic maps covering Western Tigray (1607-2014)
<p>Excerpts of 142 co-eval historical and ethno-linguistic maps covering Western Tigray (Ethiopia).</p> <p>Original data, used to prepare the article</p> <p>Nyssen, J., Biadgilgn Demissie, 2023. Administrative and ethno-linguistic boundaries of Western Tigray (Ethiopia) since 1683. Journal of Maps.</p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.