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1,355 results for “manipulation”
Data of "Pen mates' interactions, potential precursors of damaging behaviours, object manipulation, straw rooting, and primary activity: A detailed data set in undocked pigs under dietary protein restriction"
<p>Damaging behaviours, such as tail biting, are common problems in pig production, compromising animal welfare and causing economic losses. Detailed studies are impeded by the difficulty of directly observing these behaviours. Tail biting is a broader phenomenon that begins long before lesions manifest, and behavioural problems caused by various stressors present themselves weeks before they escalate to damaging behaviour, resulting in serious injuries. Therefore, detailed data on behaviours, which can be considered precursors of tail biting, such as oral and nasal manipulation of conspecifics, should be collected. The present data were collected in the course of a large study on the genetic potential of protein efficiency, in which the crude protein content in the diet was reduced to 80% of the recommendations. Dietary protein reduction is a promising way to reduce nitrogen emissions in pig manure, but its implications for animal welfare are not yet clear. Pigs differ phenotypically and genetically in their ability to utilise dietary proteins; therefore, there might be individual differences in how they cope with the protein reduction. Here, we present detailed data of focal observations of 95 pigs at an experimental farm with undocked tails that were fed a protein-reduced diet. Pigs were observed directly in their home pens for 5 min each on four different days. All actions directed towards objects in the pen, interactions with and confrontations among pen mates, and straw rooting behaviour and general activity were recorded. After the behavioural observations, wounds on different parts of the body and the cleanliness of the pigs were noted. The protein efficiency of 94 pigs was obtained. The data set comprises six tables. The first table contains information on the animals, including the identities of their parents, farrowing group, sex, and protein efficiency. The other data tables contain four 5-min observations of each pig on 10 object-manipulation behaviours; 150 interaction behaviours, including reactions; 14 confrontation behaviours and their outcomes and reactions; 10 mounting behaviours, including reactions; two rooting behaviours; seven basic behaviours; and an index of general activity. The observations took place under comparatively good housing conditions. Pigs were not tail-docked and were given fresh straw daily, <em>ad libitum</em> access to feed, floor space above the legal requirements (only a partially slatted floor), and daily cleaning of pens, and they were closely monitored for signs of damaging behaviour; all of these are favourable conditions as they limit stress and the risk of damaging behaviour. These data can be used to further explore the relationships of specific behaviours and phenomena and their association with protein efficiency. The ethogram can be used as a template for further observations. Practitioners could use the data to support pigs’ need for occupation, such as by providing sufficient straw.</p>
Data from: The experimental manipulation of atmospheric drought: Teasing out the role of microclimate in biodiversity experiments
<p class="MsoNormal">Climate change alters mean global surface temperatures, precipitation regimes, and atmospheric moisture. Resultant drought affects the composition and diversity of terrestrial ecosystems worldwide. To date, there are no assessments of the combined impacts of reduced precipitation and atmospheric drying on functional trait distributions of any species in an outdoor experiment. Here, we examined whether soil and atmospheric drought affect the functional traits of a focal grass species (<em>Poa secunda)</em> growing in monoculture and 8-species grass communities in outdoor mesocosms. We focused on specific leaf area (SLA), leaf area, stomatal density, root:shoot ratio, and fine root:coarse root ratio responses. Leaf area and overall growth were reduced with soil drying. Root:shoot ratio only increased for <em>P. secunda</em> growing in monoculture under combined atmospheric and soil drought. Plant energy allocation strategy (measured using principal components) differed when <em>P. secunda</em> was grown in combined soil and atmospheric drought conditions compared with soil drought alone. Given a lack of outdoor manipulations of this kind, our results emphasize the importance of atmospheric drying on functional trait responses more broadly. We suggest that drought methods focused purely on soil water inputs may be imprecisely predicting drought effects on other terrestrial organisms as well (other plants, arthropods, and higher trophic levels).</p>
Evaluating a Kinematic Data Glove with Pressure Sensors to Automatically Differentiate Free Motion from Product Manipulation (Experimental Data)
<p>Experimental data from <em>"Evaluating a kinematic data glove with pressure sensors to automatically differentiate free motion from product manipulation", </em>available at Applied Sciences.</p> <p>"DATA.zip" contains raw data collected using VMG30 and CyberGlove data gloves, in txt format. </p> <p>For further information please see the details in the manuscript or contact the corresponding author Alba Roda-Sales (rodaa@uji.es).</p>
Sugar signal manipulation by T6P for yield on wheat grain - whole grain RNA-seq
<p>Trehalose 6-phosphate (T6P) is a powerful internal sugar signal in plants yet cannot be directly added nor<br>fully genetically controlled. A timed microdose of a plant-permeable T6P signalling precursor, DMNB-T6P, causes substantial yield improvements. This repository contains normalised counts table for a RNA-seq of wheat (Triticum aestivum) whole grains after spray with mock/DMNB-T6P.</p> <p>DESeq2 normalised count table for raw reads deposited in ncbi SRA under Bioproject PRJNA1007614. Related manuscript in press in Nature Biotechnology.</p> <p> </p> <p>Methods extract below:</p> <p>(...) Following RNA integrity analysis and quantitation (Bioanalyser; Agilent, USA), poly-A enriched cDNA libraries were generated and sequenced on an Illumina Novaseq 6000 sequencing platform generating 30–50 million 150 bp paired-end reads per sample. Low-quality reads and adaptor sequences were removed with Trimmomatic (trimmomatic-0.39.jar PE ILLUMINACLIP:TruSeq3-PE.fa:2:30:10:2:True TRAILING:30 MINLEN:40). The reads were aligned to the wheat reference genome (<em>Triticum aestivum</em> iwgsc_refseqv2.1 using HISAT2/2.2.1-foss-2019b with default parameters and converted to Bam format with SAMtools. Gene abundance was quantified using featureCounts with the High Confidence iwgsc_refseqv2.1 annotation (counting only primary alignments of read pairs with a quality cut-off of 10). Raw counts were normalized using the trimmed mean of M-values method by DESeq2.</p>
Paper data for DeepManeuver: Adversarial Test Generation for Trajectory Manipulation of Autonomous Vehicles
<p>This repo contains the study and appendix data for "DeepManeuver: Adversarial Test Generation for Trajectory Manipulation of Autonomous Vehicles". DOI 10.1109/TSE.2023.3301443.</p>
Manipulation of photoperiod induces fat storage, but not fat mobilization in the migratory songbird, Dumetella carolinensis (Gray Catbird) 1.
<p>Datasets for "Manipulation of photoperiod induces fat storage, but not fat mobilization in the migratory songbird, Dumetella carolinensis (Gray Catbird)" publication in the Journal of Comparative Physiology B.</p>
Twenty years of Salix height in response to experimental manipulation of browsing and water table, northern range of Yellowstone National Park
<p>This respository contains multiple datasets collected during a 20 year investigation of the responses of willow (<em>Salix </em>spp.) communities in Yellowstone National Park after the restoration of large carnivores. The study sought to understand whether the restoration of wolves to the food web cause a change in the state of willow communities that occured while wolves were absent. Each dataset has a corresonding file of metadata. </p>
REMODEL. WP5. Cable Manipulation Planning, Execution and Interactive Perception. T5-4. Wiring harness manipulation. Data related to a paper for the conference CoDIT 2023
<p>The datasets contain data recorded during the experiment reported in the paper:</p><p>A. Govoni, G. Laudante, M. Mirto, C. Natale, and S. Pirozzi (2023). "Towards the automation of wire harness manufacturing: a robotic manipulator with sensorized fingers". In: 2023 9th International Conference on Control, Decision and Information Technologies (CoDIT)</p>
The raw microarray data and the differential expression analysis results from "Manipulating the growth environment through co-culture to enhance stress tolerance and viability of probiotic strains in the gastrointestinal tract".
<p>The signal data for each spot were subsequently quantified by using Feature Extraction software (Agilent Technologies).M1.txt to M5.txt: monoculture; C1.txt to C5.txt: co-culture; P1.txt to P5.txt: pH-controlled monoculture. The differential expression analysis results were obtained by using limma.</p>
Vertebral Artery and Cerebral Hemodynamics After Various Head Positions & Manipulation in Patients With Neck Pain
ClinicalTrials.gov study NCT02667821. IPD Sharing: YES. Countries: 1. Publications: 13.
Microbes as manipulators of egg size and developmental evolution
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Data from: Host manipulation by an ichneumonid spider ectoparasitoid that takes advantage of preprogrammed web-building behaviour for its cocoon protection
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Resource manipulation reveals interactive phenotype-dependent foraging in free-ranging lizards
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Data from: Chimpanzees (Pan troglodytes) strategically manipulate their environment to deny conspecifics access to food
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Data from: An effective method for ecosystem-scale manipulation of bird abundance and species richness
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Pretty cool beetles: Can manipulation of visible and near-infrared sunlight prevent overheating?
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Robotic manipulation datasets for offline compositional reinforcement learning
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Data for: Should I breed or should I go? Manipulating individual state during migration influences breeding decisions in a long-lived bird species
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A bacterial effector manipulates host lysosomal protease activity-dependent plasticity in cell death modalities to facilitate infection
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Data from: The experimental manipulation of atmospheric drought: Teasing out the role of microclimate in biodiversity experiments
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.