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502 results for “natural populations”

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dryad36/100

Phenotypic convergence in a natural Daphnia population acclimated to low temperature

<p>Fluidity of a given membrane decreases at lower ambient temperatures, whereas it rises at increasing temperatures, which is achieved through changes in membrane lipid composition. In consistence with homeoviscous adaptation theory, lower temperatures result in increased tissue concentrations of polyunsaturated fatty acids (PUFAs) in <i>D. magna</i>, suggesting a higher PUFA requirement at lower temperatures. However, so far homeoviscous adaptation has been suggested for single or geographically separated <i>Daphnia</i> genotypes only.</p> <p>Here we investigated changes in relative fatty acid (FA) tissue concentrations in response to a lower temperature (15°C) within a <i>D. magna </i>population. We determined juvenile growth rates (JGR) and FA patterns of 14 genotypes, that were grown on <i>Chlamydomonas klinobasis </i>at 15°C and 20°C. We report significant differences of JGR and the relative body content of various FAs between genotypes at either temperature and between temperatures.</p> <p>Based on slopes of reaction norms, we found genotype-specific changes in FA profiles between temperatures suggesting that genotypes have different strategies to cope with changing temperatures. In a hierarchical clustering analysis we grouped genotypes according to differences in direction and magnitude of changes in relative FA content, which resulted in three clusters of genotypes following different patterns of changes in FA composition. These patterns suggest a lower importance of the PUFA eicosapentaenoic acid (EPA, C20:5ω3) than previously assumed. We calculated an unsaturation index (UI) as a proxy for membrane fluidity at 15°C, and we neither found significant differences for this UI nor for fitness, measured as JGR, between the three genotype clusters.</p> <p>We conclude that these three genotype clusters represent different physiological solutions to temperature changes by altering the relative share of different FAs, but that their phenotypes converge with respect to membrane fluidity and JGR. These clusters will be subjected to different degrees of PUFA-limitation when sharing the same diet.</p>

opencc-zeroOct 2022View details →
zenodo36/100

Supplementary material 1 from: Virkkala R, Rajasärkkä A (2012) Preserving species populations in the boreal zone in a changing climate: contrasting trends of bird species groups in a protected area network. Nature Conservation 3: 1-20. https://doi.org/10.3897/natureconservation.3.3635

Mean densities and number of observations of species in 1981–1999 and in 2000–2009

opencc-by-4.0Dec 2012View details →
zenodo36/100

Fig. 8 in Phenology And Population Structure Of Forest Herbaceous Species In Artificial And Natural Communities In The Steppe Zone Of Ukraine

Fig. 8. Dates of onset and duration of budding (1) and flowering (2).

opencc-by-4.0Dec 2015View details →
zenodo36/100

Figure 2 in Assessing population size and survival rate of Pelophylax bedriagae caralitanus, in a well-protected Nature Park in Türkiye

Figure 2. The view of the habitat surrounding Gölcük Lake.

opencc-by-4.0Apr 2024View details →
dryad36/100

Data from: Heterosis is common and inbreeding depression absent in natural populations of Arabidopsis thaliana

The importance of genetic drift in shaping patterns of adaptive genetic variation in nature is poorly known. Genetic drift should drive partially recessive deleterious mutations to high frequency, and inter‐population crosses may therefore exhibit heterosis (increased fitness relative to intra‐population crosses). Low genetic diversity and greater genetic distance between populations should increase the magnitude of heterosis. Moreover, drift and selection should remove strongly deleterious recessive alleles from individual populations, resulting in reduced inbreeding depression. To estimate heterosis, we crossed 90 independent line pairs of Arabidopsis thaliana from 15 pairs of natural populations sampled across Fennoscandia, and crossed an additional 41 line pairs from a subset of 4 of these populations to estimate inbreeding depression. We measured lifetime fitness of crosses relative to parents in a large outdoor common garden (8448 plants in total) in central Sweden. To examine the effects of genetic diversity and genetic distance on heterosis, we genotyped parental lines for 869 SNPs. Overall, genetic variation within populations was low (median expected heterozygosity = 0.02), and genetic differentiation was high (median FST = 0.82). Crosses between 10 of 15 population pairs exhibited significant heterosis, with magnitudes of heterosis as high as 117%. We found no significant inbreeding depression, suggesting that the observed heterosis is due to fixation of mildly deleterious alleles within populations. Widespread and substantial heterosis indicates an important role for drift in shaping genetic variation, but there was no significant relationship between fitness of crosses relative to parents and genetic diversity or genetic distance between populations.

opencc-zeroDec 2018View details →
dryad36/100

Data for: Cytogeography of naturalized Solidago canadensis populations in Europe

<p><span>Autopolyploidization has driven the successful invasion of <em>Solidago canadensis</em> in East Asia. However, it was believed that only diploid <em>S. canadensis</em> invaded Europe, whereas polyploids never did. In this study, we aim to investigate whether polyploidy <em>S. canadensis</em> invaded Europe and compare</span><span> the </span><span>ecological niche differentiation pattern driven by ploidy in Asia and Europe and North America.</span><span>Here, </span><span>molecular identification (combination of ribosomal ITS and psbA-trnH intergenic spacer), ploidy level, and morphological traits of ten <em>S. canadensis</em> populations collected in Europe were compared with previously identified <em>S. canadensi</em>s populations from other continents and <em>S. altissima</em> populations. Furthermore, the ploidy-driven geographical differentiation pattern of <em>S. canadensis</em> in different continents was investigated. </span><span>Results showed that all ten European populations were identified as <em>S. canadensis</em> with five diploid and five hexaploid populations. Significant differences in morphological traits existed among diploids and polyploids (tetraploids and hexaploids), rather than between polyploids from different introduced ranges and between <em>S. altissima</em> and polyploidy <em>S. canadensis</em> populations.</span><span> The invasive hexaploids and diploids had few differences in latitudinal distributions in Europe which was similar to the native range but absolutely different from a distinct climate-niche differentiation in Asia. This may be attributed to the bigger difference in climate between Asia and Europe and North America.</span><span>The above morphological and molecular evidences proved the invasion of polyploid <em>S. canadensis </em>in Europe and suggest that </span><em><span>S. altissima</span></em><span> may be merged into a complex of </span><em><span>S. canadensis</span></em><span> species</span><span>.</span><span> Our study may be concluded that geographical and ecological niche differentiation of an invasive plant driven by ploidy depends on the degree of difference in the environmental factors between the introduced range and the native range, which provides new insight into the invasive mechanism.</span></p>

opencc-zeroMar 2023View details →
dryad36/100

Variation among strains of Borrelia burgdorferi in host tissue abundance and lifetime transmission determine the population strain structure in nature

<p class="MsoNormal">Pathogen life history theory assumes a positive relationship between pathogen load in host tissues and pathogen transmission. Empirical evidence for this relationship is surprisingly rare due to the difficulty of measuring transmission for many pathogens. The comparative method, where a common host is experimentally infected with a set of pathogen strains, is a powerful approach for investigating the relationships between pathogen load and transmission. The validity of such experimental estimates of strain-specific transmission is greatly enhanced if they can predict the pathogen population strain structure in nature.</p> <p class="MsoNormal"><em>Borrelia burgdorferi</em> is a multi-strain, tick-borne spirochete that causes Lyme disease in North America. This study used 11 field-collected strains of <em>B. burgdorferi</em>, a rodent host (<em>Mus musculus, </em>C3H/HeJ) and its tick vector (<em>Ixodes scapularis</em>) to determine the relationship between pathogen load in host tissues and lifetime host-to-tick transmission (HTT). Mice were experimentally infected via tick bite with 1 of 11 strains. Lifetime HTT was measured by infesting mice with <em>I. scapularis </em>larval ticks on 3 separate occasions. The prevalence and abundance of the strains in the mouse tissues and the ticks were determined by qPCR. We used published databases to obtain estimates of the frequencies of these strains in wild <em>I. scapularis</em> populations.</p> <p>Spirochete loads in ticks and lifetime HTT varied significantly among the 11 strains of <em>B. burgdorferi</em>. Strains with higher spirochete loads in the host tissues were more likely to infect feeding larvae, which molted into nymphs with a higher probability of <em>B. burgdorferi</em> infection (<em>i.e.</em>, higher HTT). Our laboratory-based estimates of lifetime HTT were predictive of the frequencies of these strains in wild <em>I. scapularis</em> populations. For <em>B. burgdorferi</em>, the strains that establish high abundance in host tissues and that have high lifetime transmission are the strains that are most common in nature.</p>

opencc-zeroJul 2023View details →
dryad36/100

Climate change does not equally affect temporal patterns of natural selection on reproductive timing across populations in two songbird species

<p>Climate change has led to changes in the strength of directional selection on seasonal timing. Understanding the causes and consequences of these changes is crucial to predicting the impact of climate change. But are observed patterns in one population generalisable to others, and can spatial variation in selection be explained by environmental variation among populations? We used long-term data (1955–2022) on blue and great tits co-occurring in four locations across the Netherlands to assess inter-population variation in temporal patterns of selection on laying date. To analyse selection, we combine reproduction and adult survival into a joined fitness measure. We found distinct spatial variation in temporal patterns of selection which overall acted towards earlier laying, and which was due to selection through reproduction rather than through survival. The underlying relationships between temperature, bird and caterpillar phenology were however the same across populations, and the spatial variation in selection patterns is thus caused by spatial variation in the temperatures and other habitat characteristics to which birds and caterpillars respond. This underlines that climate change is not necessarily equally affecting populations, but that we can understand this spatial variation, which enables us to predict climate change effects on selection for other populations.</p>

opencc-zeroSep 2023View details →
ClinicalTrials.gov36/100

Stay Healthy In Nature Everyday: Family Nature Outings in a Low Income Population

ClinicalTrials.gov study NCT02623855. IPD Sharing: NO. Countries: 1. Publications: 1.

closedIPD-NOFeb 2026View details →
dryad36/100

Data from: Divergence of seminal fluid gene expression and function among natural snail populations

Open the record for dataset details and reuse information.

publicJul 2020View details →
dryad36/100

Data from: Parasite resistance predicts fitness better than fecundity in a natural population of the freshwater snail Potamopyrgus antipodarum

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publicMay 2019View details →
dryad36/100

From nature reserve to mosaic management: improving matrix survival, not permeability, benefits regional populations under habitat loss and fragmentation

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publicMar 2022View details →
dryad36/100

Climate change does not equally affect temporal patterns of natural selection on reproductive timing across populations in two songbird species

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publicSep 2023View details →
dryad36/100

Data from: Heterosis is common and inbreeding depression absent in natural populations of Arabidopsis thaliana

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publicMar 2020View details →
dryad36/100

Data from: Pathogen susceptibility and fitness costs explain variation in immune priming across natural populations of flour beetles

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publicMay 2019View details →
dryad36/100

Data from: Population genomics of rapid evolution in natural populations: polygenic selection in response to power station thermal effluents

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publicFeb 2019View details →
dryad36/100

Data from: Genetic monitoring of brown trout released into a novel environment: Establishment and genetic impact on natural populations

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publicFeb 2025View details →
dryad36/100

Data from: Personality variation in a marine snail and heterogeneous selection in natural populations

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publicDec 2025View details →
dryad36/100

Variation among strains of Borrelia burgdorferi in host tissue abundance and lifetime transmission determine the population strain structure in nature

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publicJul 2023View details →
dryad36/100

Larval salamander retinal population data in response to natural movies from the Chicago Motion Database

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publicDec 2024View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record