Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
117
datasets available to search
ShareScore release 0.7.1
Dataset results
117 results for “network inference”
Inferring the stress-activated signaling network in yeast through multi-omic data integration
GEO Series GSE51844. Saccharomyces cerevisiae. 67 samples. Type: Expression profiling by array.
Inferring gene regulatory networks via transcriptional profiles as associated dynamical attractors
GEO Series GSE217383. Candida albicans. 12 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
GEO Series GSE8380. Oryza sativa. 9 samples. Type: Expression profiling by array.
Inference of transcription regulatory network in low phytic acid soybean seeds
GEO Series GSE101692. Glycine max. 60 samples. Type: Expression profiling by high throughput sequencing.
Mapping gene regulatory networks in Drosophila eye development by large-scale transcriptome perturbations and motif inference [ChIP-Seq]
GEO Series GSE62557. Drosophila melanogaster. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome regulation and gene interaction networks inferred from muscle transcriptome underlying feed efficiency in Pigs
GEO Series GSE148889. Sus scrofa. 41 samples. Type: Expression profiling by high throughput sequencing.
Inference and validation of predictive gene networks from biomedical literature and gene expression data
GEO Series GSE53091. Homo sapiens. 125 samples. Type: Expression profiling by array.
Causal network inference from gene transcriptional time-series response to glucocorticoids
GEO Series GSE144663. Homo sapiens. 199 samples. Type: Expression profiling by high throughput sequencing.
GRNsmile: gene regulatory network inference with a single-cell multi-layer omics approach [scRNA-seq]
GEO Series GSE173457. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
TuxNet: A simple interface to process RNA sequencing data and infer gene regulatory networks
GEO Series GSE112563. Arabidopsis thaliana. 6 samples. Type: Expression profiling by high throughput sequencing.
Enhancing single-cell cellular state inference by incorporating molecular network features
GEO Series GSE140288. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
GRNsmile: gene regulatory network inference with a single-cell multi-layer omics approach [scATAC-seq]
GEO Series GSE173458. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
TuxNet: A simple interface to process RNA sequencing data and infer gene regulatory networks [XVE:PAN]
GEO Series GSE112564. Arabidopsis thaliana. 9 samples. Type: Expression profiling by high throughput sequencing.
Rice Gene Network Inferred from Expression Profiling of Plants Carrying Xa3/Xa26.
GEO Series GSE69235. Oryza sativa Japonica Group; Oryza sativa. 28 samples. Type: Expression profiling by array.
Inferring co-expression networks of Arabidopsis thaliana genes during their interaction with Trichoderma spp.
GEO Series GSE235893. Arabidopsis thaliana. 27 samples. Type: Expression profiling by high throughput sequencing.
GRNsmile: gene regulatory network inference with a single-cell multi-layer omics approach
GEO Series GSE173460. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
GRNsmile: gene regulatory network inference with a single-cell multi-layer omics approach [Micro-C]
GEO Series GSE173459. Homo sapiens. 6 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.