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121
datasets available to search
ShareScore release 0.7.1
Dataset results
121 results for “orthology”
Effect of knocking down complex I subunit nuo-5 (ortholog of the human NDUFS1) in C.elegans
GEO Series GSE144573. Caenorhabditis elegans. 12 samples. Type: Expression profiling by array.
Bivalent complexes of PRC1 with orthologs of BRD4 and MOZ/MORF target developmental genes in Drosophila
GEO Series GSE104059. Drosophila melanogaster; Homo sapiens. 36 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Depletion of yeast PDK1 orthologs triggers a stress-like transcriptional response
GEO Series GSE32623. Saccharomyces cerevisiae. 8 samples. Type: Expression profiling by array.
Replacement of Arabidopsis H2A.Z with human H2A.Z orthologs reveals extensive functional conservation and limited importance of the N-terminal tail sequence for Arabidopsis development (WT, h2a.z + Hs
GEO Series GSE263311. Arabidopsis thaliana. 6 samples. Type: Expression profiling by high throughput sequencing.
Replacement of Arabidopsis H2A.Z with human H2A.Z orthologs reveals extensive functional conservation and limited importance of the N-terminal tail sequence for Arabidopsis development (ChIP-Seq)
GEO Series GSE263312. Arabidopsis thaliana. 9 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Drosophila melanogaster Mutated in its GBA1b Ortholog Recapitulates Neuronopathic Gaucher Disease
GEO Series GSE142144. Drosophila melanogaster. 30 samples. Type: Expression profiling by high throughput sequencing.
Replacement of Arabidopsis H2A.Z with human H2A.Z orthologs reveals extensive functional conservation and limited importance of the N-terminal tail sequence for Arabidopsis development
GEO Series GSE263313. Arabidopsis thaliana. 24 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
CLOCKWORK ORANGE promotes CLOCK-CYCLE activation via the putative Drosophila ortholog of CLOCK INTERACTING PROTEIN CIRCADIAN
GEO Series GSE165044. Drosophila melanogaster. 30 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Identification and comparison of orthologous cell types from primate embryoid bodies shows limits of marker gene transferability
GEO Series GSE280441. Macaca fascicularis; Homo sapiens; Macaca mulatta; Pongo abelii. 10 samples. Type: Expression profiling by high throughput sequencing.
Divergence of regulatory networks governed by the orthologous transcription factors FLC and PEP1 in Brassicaceae species
GEO Series GSE89638. Arabis alpina. 12 samples. Type: Expression profiling by high throughput sequencing.
Replacement of Arabidopsis H2A.Z with human H2A.Z orthologs reveals extensive functional conservation and limited importance of the N-terminal tail sequence for Arabidopsis development (WT, h2a.z, h2a
GEO Series GSE263310. Arabidopsis thaliana. 9 samples. Type: Expression profiling by high throughput sequencing.
CLOCKWORK ORANGE promotes CLOCK-CYCLE activation via the Drosophila ortholog of CLOCK INTERACING PROTEIN, CIRCADIAN (RNA-Seq)
GEO Series GSE165043. Drosophila melanogaster. 24 samples. Type: Expression profiling by high throughput sequencing.
Ortholog replacement reveals stable TFIIIC complexes are required for proper mitotic chromosome segregation
GEO Series GSE287186. Saccharomyces cerevisiae S288C. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Whole genome bisulfite sequencing from primate brains (orthologous region to human BA46)
GEO Series GSE151768. Pan troglodytes; Macaca mulatta. 50 samples. Type: Methylation profiling by high throughput sequencing.
The impact of Mmu17 non-Hsa21 orthologous genes in the Ts65Dn mouse model of Down syndrome: the “gold standard” refuted
GEO Series GSE222355. Mus musculus. 89 samples. Type: Expression profiling by array.
Transcriptome sequencing of WT and inorganic phosphate transporter (TgPiT) ortholog-deficient Toxoplasma parasites
GEO Series GSE145660. Toxoplasma gondii. 4 samples. Type: Expression profiling by high throughput sequencing.
Human and Murine Kidneys Contain Transcriptionally and Spatially Orthologous Resident Macrophage Subpopulations in Acute Kidney Injury
GEO Series GSE226533. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
CLOCKWORK ORANGE promotes CLOCK-CYCLE activation via the Drosophila ortholog of CLOCK INTERACING PROTEIN, CIRCADIAN (ChIP-Seq)
GEO Series GSE165042. Drosophila melanogaster. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Mapping file used for input validation in Quest for Orthologs
<pre>Mapping file used in the validation step and the map_relation.py step of the uploaded file format in QfO 2018 bechmarking workflow (https://github.com/qfo/benchmark-webservice/tree/elixir).</pre>
Eukaryota, Luca, Vertebrata and Fungi Species Tree used in Quest for Orthologs Benchmarking
<p>Eukaryota, Luca, Vertebrata and Fungi Species Tree used in Quest for Orthologs Benchmarking by the 2018 event workflow (https://github.com/qfo/benchmark-webservice/tree/elixir). It is used specifically by the old variant of the generalized species tree discordance benchmark and defines the multifurcating reference species tree with collapsed edges for some of the more debated splits.</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.