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FIG. 2 in The first molecular confirmation of the presence of the genus Ladislavella (Gastropoda: Lymnaeidae) in the European part of Russia
FIG. 2. Shell variability in Ladislavella cf. terebra from Penza City. Shells collected in August 2022. Scale bar: 10 mm. РИС. 2. ИЗменчивость раковины Ladislavella cf. terebra иЗ ПенЗы. Раковины собраны в августе 2022 г. Масштабная линейка: 10 мм.
FIG. 3 in The first molecular confirmation of the presence of the genus Ladislavella (Gastropoda: Lymnaeidae) in the European part of Russia
FIG. 3. The copulatory apparatus of Ladislavella cf. terebra from Penza City (A) and from Siberia, Tyumen Region, Labytnangi Town (B). Scale bar: 5 mm. A – original photo; B – photo by Dmitry Palatov. РИС. 3. Копулятивный аппарат Ladislavella cf. terebra иЗ ПенЗы (A) и Сибири, Тюменская обл., г. Лабытнанги (B). Масштабная линейка: 5 mm. A – ориг.; B – фото Дмитрия Палатова.
FIG. 4 in The first molecular confirmation of the presence of the genus Ladislavella (Gastropoda: Lymnaeidae) in the European part of Russia
FIG. 4. Abnormally large individual of Ladislavella cf. terebra with trematode parthenitae in the hepatopancreas and mantle cavity. A. Shell. B. The copulatory apparatus. C. Soft body. Scale bars: 2 mm (B, C), 5 mm (A). РИС. 4. Аномально крупная особь Ladislavella cf. terebra с партенитами трематод в гепатопанкреасе и мантийной полости. A. Раковина. B. Копулятивный аппарат. C. Мягкое тело. Масштабная линейка: 2 мм (В, C), 5 мм (А).
Results complementing the European Union summary report on surveillance for the presence of transmissible spongiform encephalopathies (TSE) - Norway
<p>This dataset contains TSE surveillance results in cattle, sheep, goats, cervids and other species, and genotyping in sheep, pursuant to Regulation (EC) 999/2001.</p> <p><strong>Reporting authorities contributing to each data collection</strong>:</p> <ul> <li>TSE_2023_NO: Norwegian Veterinary Institute (NVI)</li> <li>TSE_2022_NO: Norwegian Veterinary Institute (NVI)</li> <li>TSE_2021_NO: Norwegian Veterinary Institute (NVI)</li> <li>TSE_2020_NO: Norwegian Veterinary Institute (NVI)</li> <li>TSE_2019_NO: Norwegian Veterinary Institute (NVI)</li> </ul>
Results complementing the European Union summary report on surveillance for the presence of transmissible spongiform encephalopathies (TSE) - Latvia
<p>This dataset contains TSE surveillance results in cattle, sheep, goats, cervids and other species, and genotyping in sheep, pursuant to Regulation (EC) 999/2001.</p> <p><strong>Reporting authorities contributing to each data collection</strong>:</p> <ul> <li>TSE_2023_LV: Food and Veterinary Service (PVD)</li> <li>TSE_2022_LV: Food and Veterinary Service (PVD)</li> <li>TSE_2021_LV: Food and Veterinary Service (PVD)</li> <li>TSE_2020_LV: Food and Veterinary Service (PVD)</li> <li>TSE_2019_LV: Food and Veterinary Service (PVD)</li> </ul>
Results complementing the European Union summary report on surveillance for the presence of transmissible spongiform encephalopathies (TSE) - Luxembourg
<p>This dataset contains TSE surveillance results in cattle, sheep, goats, cervids and other species, and genotyping in sheep, pursuant to Regulation (EC) 999/2001.</p> <p><strong>Reporting authorities contributing to each data collection:</strong></p> <ul> <li>TSE_2023_LU: Veterinary Services Administration (ASV)</li> <li>TSE_2022_LU: Veterinary Services Administration (ASV)</li> <li>TSE_2021_LU: Veterinary Services Administration (ASV)</li> <li>TSE_2020_LU: Veterinary Services Administration (ASV)</li> <li>TSE_2019_LU: Veterinary Services Administration (ASV)</li> </ul>
Results complementing the European Union summary report on surveillance for the presence of transmissible spongiform encephalopathies (TSE) - Bosnia and Herzegovina
<p>This dataset contains TSE surveillance results in cattle, sheep, goats, cervids and other species, and genotyping in sheep, pursuant to Regulation (EC) 999/2001.</p> <p><strong>Reporting authorities contributing to each data collection</strong>:</p> <ul> <li>TSE_2023_BA: Food Safety Agency of Bosnia and Herzegovina (FSA)</li> <li>TSE_2022_BA: Food Safety Agency of Bosnia and Herzegovina (FSA)</li> <li>TSE_2021_BA: Food Safety Agency of Bosnia and Herzegovina (FSA)</li> <li>TSE_2020_BA: Food Safety Agency of Bosnia and Herzegovina (FSA)</li> </ul> <p>For Bosnia and Herzegovina, 2020 is the first year reporting TSE surveillance results.</p>
FIG. 1 in When did roosters start singing at Arslantepe? A preliminary assessment of the presence and spread of Gallus gallus (Linnaeus, 1758) in Iron Age Eastern Anatolia
FIG. 1. — Map of Anatolia and the Levant with the main sites mentioned in the text (modified data courtesy of National Centers for Environmental Infor- mation – ETOPO1, Natural Earth and Geo Network opensource. https://doi. org/10.7289/V5C8276M).
FIG. 4 in When did roosters start singing at Arslantepe? A preliminary assessment of the presence and spread of Gallus gallus (Linnaeus, 1758) in Iron Age Eastern Anatolia
FIG. 4. — Arslantepe, tarsometatarsi (left and right) of rooster from level IIIB. Photo credits: R. Ceccacci, ©MAIAO. Scale bar: 3 cm.
TSE results complementing the European Union summary report on surveillance for the presence of transmissible spongiform encephalopathies (TSE) - the United Kingdom
<p>This dataset contains TSE surveillance results in cattle, sheep, goats, cervids and other species, and genotyping in sheep, pursuant to Regulation (EC) 999/2001.</p> <p>REPORTING AUTHORITIES CONTRIBUTING TO EACH DATA COLLECTION: TSE_2020_UK: Animal and Plant Health Agency (APHA)</p>
FIG. 4 in Presence of the foraminifer Chapmanina gassinensis Silvestri, 1931, in the Eocene (Lutetian) of the Grignon "falunière" (Yvelines, Paris Basin). The genus Chapmanina, its species and world distribution
FIG. 4. — Distribution of Chapmanina gassinensis Silvestri,1931 in the Oligocene of Europe. The numbers correspond to the references indicated in the Appendix 1.
FIG. 5 in Presence of the foraminifer Chapmanina gassinensis Silvestri, 1931, in the Eocene (Lutetian) of the Grignon "falunière" (Yvelines, Paris Basin). The genus Chapmanina, its species and world distribution
FIG. 5. — Distribution of Chapmanina Silvestri, 1931 in the Eocene of Asia. The numbers correspond to the references indicated in the Appendix 1.
FIG. 3 in Presence of the foraminifer Chapmanina gassinensis Silvestri, 1931, in the Eocene (Lutetian) of the Grignon "falunière" (Yvelines, Paris Basin). The genus Chapmanina, its species and world distribution
FIG. 3. — Distribution of Chapmanina gassinensis Silvestri, 1931 in the Eocene of Europe and North Africa. The numbers correspond to the references indicated in the Appendix 1.
FIG. 2 in Presence of the foraminifer Chapmanina gassinensis Silvestri, 1931, in the Eocene (Lutetian) of the Grignon "falunière" (Yvelines, Paris Basin). The genus Chapmanina, its species and world distribution
FIG. 2. — The "Falunière" of Grignon section, after Guernet et al. (2012) for the section profile, lithologic units and sub-units and descriptions, Gély (1996) for the sequential units and Huyghe et al. (2012) for the correlation of sequential and lithologic units. Section profile modified from Sanders et al. 2015.
FIG. 1 in Presence of the foraminifer Chapmanina gassinensis Silvestri, 1931, in the Eocene (Lutetian) of the Grignon "falunière" (Yvelines, Paris Basin). The genus Chapmanina, its species and world distribution
FIG. 1. — Chapmanina gassinensis Silvestri, 1931 (Lutetian, Grignon falunière, Yvelines), in lateral (A) and apical (B) views (MNHN.F.F62410). Scale bars: 200 µm.
Erratum: Constraints on dark matter-nucleon effective couplings in the presence of kinematically distinct halo substructures using the DEAP-3600 detector [Phys. Rev. D 102, 082001 (2020)]
<p>Corrections to the results from O<sub>3</sub> operator in <a href="https://journals.aps.org/prd/abstract/10.1103/PhysRevD.102.082001">Phys. Rev. D 102, 082001</a>. "Constraints on dark matter-nucleon effective couplings in the presence of kinematically distinct halo substructures using the DEAP-3600 detector".</p>
Dataset for publication "Measuring Harmonics With Inductive Voltage Transformers in Presence of Subharmonics"
<p>This is a dataset for paper published:</p> <p>G. Crotti, G. D’Avanzo, P. S. Letizia and M. Luiso, "Measuring Harmonics With Inductive Voltage Transformers in Presence of Subharmonics," in <em>IEEE Transactions on Instrumentation and Measurement</em>, vol. 70, pp. 1-13, 2021, Art no. 9005013, doi: 10.1109/TIM.2021.3111995.</p> <p> </p> <p>Excel file provides data for Figures from 9 to 16.</p>
Maps of depths are created for the site of 50 m length. Flow types are turbulent, broken standing waves, unbroken standing waves, and rippled. The average width was 8 m and varied from 5.5 to 12 m. Bed elements included bars, rocks, and step/pools. The average depth was 0.35 m, with a maximum of 0.6 m. The average velocity was 0.4 m/s, with a maximum of 1.2 m/s (figs 10). Distribution of bottom habitats at the locations with the crayfish are as follows: megalital — 5 %, macrolithal — 30 %, mesolithal — 25 %, microlithal — 15 %, psammal — 15 %, CPOM — 10 %. Assessment by hydrobiological parameters showed that the presence of Lyngbya and Oscillatoria, as well as the increase of the number of Oligochae- in New Findings Of White Clawed Crayfish, Austropotamobius Pallipes (Decapoda, Astacidae), And Peculiarities Of Its Spatial Distribution In Neretvica (Bosnia And Herzegovina)
Maps of depths are created for the site of 50 m length. Flow types are turbulent, broken standing waves, unbroken standing waves, and rippled. The average width was 8 m and varied from 5.5 to 12 m. Bed elements included bars, rocks, and step/pools. The average depth was 0.35 m, with a maximum of 0.6 m. The average velocity was 0.4 m/s, with a maximum of 1.2 m/s (figs 10). Distribution of bottom habitats at the locations with the crayfish are as follows: megalital — 5 %, macrolithal — 30 %, mesolithal — 25 %, microlithal — 15 %, psammal — 15 %, CPOM — 10 %. Assessment by hydrobiological parameters showed that the presence of Lyngbya and Oscillatoria, as well as the increase of the number of Oligochae-
Gold Nanoparticles Synthesized in the Presence of Peptides - UV-Vis Spectra, Fluorescence, USAXS, Electron Microscopy
<p>Content Summary:</p> <ul> <li>Data from experiments in which gold nanoparticles were synthesized in the presence of peptides using a liquid-handling robot. Samples were analyzed using UV-Vis spectroscopy, fluorescence emission, USAXS, TEM, and SEM. </li> <li>Notebooks for loading and plotting data</li> <li>Code for synthesizing samples using an OT2 Opentrons liquid-handling robot.</li> </ul> <p>README:</p> <p><strong>/Data</strong></p> <p>Contains all UV-Vis, electron microscopy, fluorescence, and SAXS data for gold nanoparticles synthesized in the presence of peptides and HEPES.</p> <p><strong>/Data/2021_12_30_Prepared_UV_Vis_Data</strong></p> <p>The primary portion of the experimental dataset. UV-Vis spectroscopy data collected on a Biotek Epoch 2 microplate spectrophotometer 24 hours after samples were synthesized using a liquid handling robot (Opentrons OT2). The <strong>4x4x4_SI.csv </strong>file is the compilation of all sample information:</p> <ul> <li>Concentrations (M) of peptide, HAuCl4, and HEPES</li> <li>UID – unique ID based on date of synthesis, sample position, and peptide which was used to synthesize the sample.</li> <li>Peptide names: Z2: RMRMKMK; MZ2: myristoylated - RMRMKMK; MZ2R: myristoylated - KMKMRMR; PZ2: palmitoylated – RMRMKMK; Z2M6I: RMRMKIK; Z2M246I: RIRIKIK; AG3: AYSSGAPPMPPF.</li> </ul> <p>Each sample’s UID is a key to match with UV-Vis measurement result stored in the {<strong>UID}.txt </strong>files. Each of these files contains the wavelength, absorbance, and absorbance after subtraction of a water measurement.</p> <p><strong>/Data/2022_02_13_AuPeptide_Kinetics</strong></p> <p><strong>Measurement_Data.xlsx</strong> and <strong>Measurement_Times.xlsx </strong>contain UV-Vis spectra at several time points for each well measured, and the time corresponding to each time step, respectively. See <strong>/Notebooks/UV_Vis_Kinetics.ipynb</strong> for data plotting and sample concentration information.</p> <p><strong>/Data/ElectronMicroscopy</strong></p> <p>Scanning electron microscopy and transmission electron microscopy results of gold nanoparticles formed from the reduction of HAuCl4 in the presence or absence of different peptides.</p> <p>Fig A, B, C, D, E/F were prepared in the presence of Z2, Z2M6I, Z2M246I, no peptide, and MZ2R, respectively.</p> <p><strong>/Data/Fluorescence</strong></p> <p>Pyrene fluorescence data collected in the presence of different concentrations of lipidated peptides (MZ2, MZ2R, and PZ2) for estimation of the peptide critical micelle concentration.</p> <p><strong>/Data/SAXS</strong></p> <p>SAXS data of a high concentration of MZ2 which was fit using a cylindrical model form factor. The evaluated model is also shared in this directory.</p> <p><strong>/Data/USAXS</strong></p> <p>Similarly to the UV-Vis data directory, the <strong>USAXS_SI.csv</strong> file contains sample information for all of the USAXS measurements. The <strong>dsm_rg.csv</strong> file contains the output of AUTORG evaluated on the desmeared data after subtraction of a flat background at high-q. <strong>/DSM_Nexus, DSM_sub_AUTORG, </strong>and <strong>SMR_Nexus</strong> contain the desmeared, desmeared with background subtraction, and smeared versions of the USAXS data, respectively.</p> <p><strong>/Notebooks</strong></p> <p>Notebooks for plotting the shared data and estimating the CMC from the fluorescence data. See <strong>/Notebooks/environment.yml</strong> for packages necessary to execute the notebooks here and in <strong>/Synthesis_Protocol</strong>. We recommend installing this environment by using:</p> <p>conda env create -f /environment.yml</p> <p>Refer to <a href="https://github.com/SasView/sasmodels">https://github.com/SasView/sasmodels</a> and the first cell of <strong>/Notebooks/USAXS.ipynb</strong> for specific instructions on how to complete installation of the sasmodels module (sasmodels will be installed by Pip if you correctly use the shared environment.yml file).</p> <p><strong>/Figures</strong></p> <p>Figures generated from <strong>/Notebooks</strong>.</p> <p><strong>/Synthesis_Protocol</strong></p> <p>Please read the instructions within <strong>/Synthesis_Procol/Example.ipynb</strong>. In short, this folder contains the code used to synthesize the samples in this dataset using an OT2 Opentrons liquid handling robot.</p> <p> </p>
Data from: Hybrid incompatibility between D. virilis and D. lumei is stronger in the presence of transposable elements
<p>Mismatches between parental genomes in selfish elements are frequently hypothesized to underlie hybrid dysfunction and drive speciation. However, because the genetic basis of most hybrid incompatibilities is unknown, testing the contribution of selfish elements to reproductive isolation is difficult. Here we evaluated the role of transposable elements (TEs) in hybrid incompatibilities between Drosophila virilis and D. lummei by experimentally comparing hybrid incompatibility in a cross where active TEs are present in D. virilis (TE+) and absent in D. lummei, to a cross where these TEs are absent from both D. virilis (TE-) and D. lummei genotypes. Using genomic data, we confirmed copy number differences in TEs between the D. virilis (TE+) strain and the D. virilis (TE-) strain and D. lummei. We observed F1 postzygotic reproductive isolation exclusively in the interspecific cross involving TE+ D. virilis but not in the cross involving TE- D. virilis. This precisely mirrors the intraspecies dysgenic phenotype where teste atrophy only occurs when TE+ D. virilis is the paternal parent. A series of backcross experiments, designed to account for alternative models of hybrid incompatibility, showed that both F1 hybrid incompatibility and intrastrain dysgenesis is consistent with the action of TEs rather than other, genic, interactions. A further Y-autosome interaction contributes to additional, sex-specific, inviability in one direction of this cross combination. These experiments demonstrate that TEs that cause intraspecies dysgenesis can increase reproductive isolation between closely related lineages, thereby adding to the processes that consolidate speciation.</p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.