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371 results for “race”
WP2 T2.4 MEDIA T05 Cyclocross In tent after race 2
<p>In tent after race_2.zip: codec mp4 (60MB/S), taken from 7 camera GOPRO rig, raw material suitable for stitching software (Videostitch)</p>
Sound Static Data Race Verification for C: Is the Race Lost?
<p>This artifact contains the benchmarks, tools and scripts for reproduction, along with our reference results used for the paper.</p> <h1>Contents</h1> <p dir="auto">The reproduction package contains materials for reproducing Tables 2, 4, 5, 10, and 14 from the paper. These tables provide the data supporting research questions 2 and 3, as well as additional evaluation results.</p> <p dir="auto">We provide two versions of the artifact:</p> <ol> <li>The source version includes benchmarks, scripts and reference results such that they can easily be accessed and reused outside of the virtual machine.</li> <li>The virtual machine version additionally includes tools and their dependencies such that the results can be reproduced by execution.</li> </ol> <p dir="auto">The <strong>source version</strong> contains:</p> <ul> <li><code>README.md</code>/<code>README.pdf</code> — This file.</li> <li><code>concrat-benchmarks/</code> — Concrat benchmarks (RQ 3) and execution scripts. <ul> <li><code>results-paper/</code> — Reference results used for Table 2.</li> </ul> </li> <li><code>extracted-micro-benchmarks/</code> — Extracted micro-benchmarks (with their racy variations) and execution scripts (RQ 2). <ul> <li><code>results-paper/</code> — Reference results used for Table 4 (Finding 2).</li> </ul> </li> <li><code>concrat-benchmarks-excluded/</code> — Excluded Concrat benchmarks (RQ 3).</li> <li><code>sv-benchmarks/</code> — SV-COMP 2023 NoDataRace-Main category benchmarks.</li> <li><code>joern/</code> — Joern scripts for Table 5 (RQ 3). <ul> <li><code>concrat-benchmarks-paper/</code> — Reference results for Concrat benchmarks used for Table 5 (Finding 3).</li> <li><code>concrat-benchmarks-excluded-paper/</code> — Reference results for excluded Concrat benchmarks used for Table 5 (Finding 3).</li> <li><code>sv-benchmarks-paper/</code> — Reference results for SV-COMP benchmarks used for Table 5 (Finding 3).</li> <li><code>extracted-micro-benchmarks-paper/</code> — Reference results for extracted micro-benchmarks used for Table 14.</li> </ul> </li> <li><code>sv-benchmarks.sh</code> — Script to download SV-COMP 2023 NoDataRace-Main category benchmarks.</li> <li><code>tools/download.sh</code> — Script to download SV-COMP 2023 tools from their reproduction packages.</li> <li><code>properties/no-data-race.prp</code> — Property file for executing SV-COMP tools.</li> <li><code>tsan-races/</code> — Scripts to run ThreadSanitizer on Concrat benchmarks. <ul> <li><code>logs/</code> — Reference results used for Table 2 and Table 10.</li> </ul> </li> </ul> <p dir="auto">The <strong>virtual machine version</strong> contains all of the above in <code>/home/vagrant</code>, but also:</p> <ul> <li><code>concrat-benchmarks/</code> <ul> <li><code>results-test/</code> — Results from kick-the-tires (initially empty).</li> <li><code>results/</code> — Full evaluation results (initially empty).</li> <li><code>results-reduced/</code> — Reduced evaluation results (initially empty).</li> </ul> </li> <li><code>extracted-micro-benchmarks/</code> <ul> <li><code>results-test/</code> — Results from kick-the-tires (initially empty).</li> <li><code>results/</code> — Full evaluation results (initially empty) (Finding 2).</li> <li><code>results-reduced/</code> — Reduced evaluation results (initially empty) (Finding 2).</li> </ul> </li> <li><code>joern/</code> <ul> <li><code>concrat-benchmarks/</code> — Results for Concrat benchmarks (initially empty) (Finding 3).</li> <li><code>concrat-benchmarks-excluded/</code> — Results for excluded Concrat benchmarks (initially empty) (Finding 3).</li> <li><code>sv-benchmarks/</code> — Results for SV-COMP benchmarks (initially empty) (Finding 3).</li> </ul> </li> <li><code>tools/</code> (subdirectories) — Downloaded SV-COMP 2023 tools from their reproduction packages.</li> </ul> <h1>Hardware Dependencies</h1> <p dir="auto">The executable artifact is a <a href="https://www.virtualbox.org/">VirtualBox</a> virtual machine, because <a href="https://github.com/sosy-lab/benchexec">BenchExec</a> does not run in Docker. <strong>Full evaluation</strong> requires:</p> <ul> <li>8 CPU cores,</li> <li>26 GB RAM,</li> <li>7 GB disk space,</li> <li>~2 days and 15 hours.</li> </ul> <p dir="auto">Considering the significant runtime, we also provide a reduced evaluation. <strong>Reduced evaluation</strong> requires:</p> <ul> <li>8 CPU cores,</li> <li>16 GB RAM,</li> <li>7 GB disk space,</li> <li>~2 hours.</li> </ul>
High parasite diversity maintained after an alga-virus coevolutionary arms race
<p>Data and analysis files accompanying the paper 'High parasite diversity maintained after an alga-virus coevolutionary arms race' (Lievens, Kühn et al. 2024, <em>J Evol Biol</em>). Includes data and code for the phenotypes (host clone range, survival, growth) and genotypes (SNPs, copy number variation) of the virus isolates form the post-arms race phase of an experimental coevolution between <em>Chlorella variabilis</em> algae and PBCV-1 viruses.</p>
The 3'-RACE data (InPACT: A computational method for accurate characterization of intronic polyadenylation from RNA sequencing data)
Open the record for dataset details and reuse information.
Subspecies and Distribution. C.s.simumBurchell,1817—SEAngola,NENamibia,Botswana,Zimbabwe,SMozambique,Swaziland,SouthAfrica,andperhapsformerlyinextremeSWZambia. C. s. cottoni Lydekker, 1908 — historically present in S Chad, Central African Republic, S Sudan, NE DR Congo, and Uganda; last individuals occurred in DR Congo, but possibly extinct in the wild. The "Southern White Rhino," race simum, has been introduced into Kenya, Uganda, and Zambia. Especially vague range map for conservation reasons. in Rhinocerotidae
Subspecies and Distribution. C.s.simumBurchell,1817—SEAngola,NENamibia,Botswana,Zimbabwe,SMozambique,Swaziland,SouthAfrica,andperhapsformerlyinextremeSWZambia. C. s. cottoni Lydekker, 1908 — historically present in S Chad, Central African Republic, S Sudan, NE DR Congo, and Uganda; last individuals occurred in DR Congo, but possibly extinct in the wild. The "Southern White Rhino," race simum, has been introduced into Kenya, Uganda, and Zambia. Especially vague range map for conservation reasons.
THE ATOMIC RACE DURING THE SECOND WORLD WAR
<p>The article examines the race for the possession of atomic weapons, which unfolded between Nazi Germany and the United States during the Second World War. The chronology of events shows that Nazi Germany was in the lead in the atomic race in 1940 and 1941. After the defeat of the Fascist troops near Moscow in December 1941, Hitler ordered to mobilize all resources for current military needs. At a time when the fighting on the Eastern Front was pulling more and more financial and human resources out of the Reich, the Nazi leadership came to the conclusion that the creation (and even more so the use) of nuclear weapons during the Second World War are no longer possible. If the United States (a huge rich country without military operations on its territory) intensified work on the nuclear project every month, then the Third Reich, on the contrary, conducted it according to the residual principle. The authors conclude that the main force that prevented the Nazis from unleashing atomic death on the world was the Soviet Union, which made a decisive contribution to the defeat of fascism.</p>
Data from: A diversification relay race from Caribbean-Mesoamerica to the Andes: historical biogeography of Xylophanes hawkmoths
<p>The regions of the Andes and Caribbean-Mesoamerica are both hypothesized to be the cradle for many Neotropical lineages, but few studies have fully investigated the dynamics and interactions between Neotropical bioregions. The NewWorld hawkmoth genus Xylophanes is the most taxonomically diverse genus in the Sphingidae, with the highest endemism and richness in the Andes and Caribbean-Mesoamerica. We integrated phylogenomic and DNA barcode data and generated the first time-calibrated tree for this genus, covering 93.8% of the species diversity. We used event-based likelihood ancestral area estimation and biogeographic stochastic mapping to examine the speciation and dispersal dynamics of Xylophanes across bioregions. We also used trait-dependent diversification models to compare speciation and extinction rates of lineages associated with different bioregions. Our results indicate that Xylophanes originated in Caribbean-Mesoamerica in the Late Miocene, and immediately diverged into five major clades. The current species diversity and distribution of Xylophanes can be explained by two consecutive phases. In the first phase, the highest Xylophanes speciation and emigration rates occurred in the Caribbean-Mesoamerica, and the highest immigration rates occurred in the Andes, whereas in the second phase the highest immigration rates were found in Amazonia, and the Andes had the highest speciation and emigration rates.</p>
Murina fusca may prove to be merely ajunior synonym of M. hilgendorfi, although the only known specimen is apparently very distinctive; further analysis is needed. Originally described as a race of M. huttonii, but does not appearto be closely related to it. Monotypic. Distribution. Known only from the type locality in Heilongjiang, NE China. in Vespertilionidae
Murina fusca may prove to be merely ajunior synonym of M. hilgendorfi, although the only known specimen is apparently very distinctive; further analysis is needed. Originally described as a race of M. huttonii, but does not appearto be closely related to it. Monotypic. Distribution. Known only from the type locality in Heilongjiang, NE China.
Subspecies and Distribution. I.a.auratusRamsay,1887—NWKimberleyandseveralsmallislandsoffKimberleycoast. I.a.arnhemensisLyne&Mort,1981—CapeArnhem,NENorthernTerritory. I. a. barrowensis Thomas, 1901 — Barrow I and Middle I, Western Australia. Occurs also (subspecies uncertain) on Marchinbar I, in Wessel Group, Northern Territory, and introduced recently to two further islands in Wessel Group. Barrow I race barrowensis introduced to nearby Hermite I, to Doole I (in Exmouth Gulf), and to Lorna Glen (mainland of C Western Australia) in recentyears. in Peramelidae
Subspecies and Distribution. I.a.auratusRamsay,1887—NWKimberleyandseveralsmallislandsoffKimberleycoast. I.a.arnhemensisLyne&Mort,1981—CapeArnhem,NENorthernTerritory. I. a. barrowensis Thomas, 1901 — Barrow I and Middle I, Western Australia. Occurs also (subspecies uncertain) on Marchinbar I, in Wessel Group, Northern Territory, and introduced recently to two further islands in Wessel Group. Barrow I race barrowensis introduced to nearby Hermite I, to Doole I (in Exmouth Gulf), and to Lorna Glen (mainland of C Western Australia) in recentyears.
Subspecies and Distribution. P. b. bougainville Quoy & Gaimard, 1824 — Bernier I and Dorre I, in Shark Bay, Western Australia. Nominate race reintroduced to Heirisson Prong and Faure I (Shark Bay) and to the Arid Recovery Project area in South Australia. in Peramelidae
Subspecies and Distribution. P. b. bougainville Quoy & Gaimard, 1824 — Bernier I and Dorre I, in Shark Bay, Western Australia. Nominate race reintroduced to Heirisson Prong and Faure I (Shark Bay) and to the Arid Recovery Project area in South Australia.
Thoroughbred horse inbreeding measures and racing phenotypes
<p>We quantified inbreeding based on runs of homozygosity (ROH) using 297K SNP genotypes from 6,128 horses born in Europe and Australia, of which 13.2% were unraced. </p>
Subspecies and Distribution. P.l.lateralisGould,1842—patchilyacrossSWesternAustralia,includingCapeRange,LittleSandyDesert,andthenearKellerberrininWheatbelt;alsoBarrowIandSalisburyI. P.l.hackettiThomas,1905—islandsofWilson,Mondrain,andWestall(RechercheArchipelago),WesternAustralia.Mayhaveoccurredhistoricallyalsoonadjacentmainland. P. l. pearson: Thomas, 1922 — North Pearson I, Investigator Group, South Australia. Introduced to South and Middle Pearson, Thistle, and Wedge Is, South Australia. A hitherto undescribed subspecies, the West Kimberley race, occurs (distributional limits uncertain) in Edgar, Grant, and Erskine Ranges and on Mt Wynne, Mt Anderson, and Mt Alexander, in S West Kimberley, Western Australia. A second undescribed subspecies, the MacDonnell Ranges race, is present in MacDonnell Ranges of C Australia, extending to E Western Australia and N South Australia. in Macropodidae
Subspecies and Distribution. P.l.lateralisGould,1842—patchilyacrossSWesternAustralia,includingCapeRange,LittleSandyDesert,andthenearKellerberrininWheatbelt;alsoBarrowIandSalisburyI. P.l.hackettiThomas,1905—islandsofWilson,Mondrain,andWestall(RechercheArchipelago),WesternAustralia.Mayhaveoccurredhistoricallyalsoonadjacentmainland. P. l. pearson: Thomas, 1922 — North Pearson I, Investigator Group, South Australia. Introduced to South and Middle Pearson, Thistle, and Wedge Is, South Australia. A hitherto undescribed subspecies, the West Kimberley race, occurs (distributional limits uncertain) in Edgar, Grant, and Erskine Ranges and on Mt Wynne, Mt Anderson, and Mt Alexander, in S West Kimberley, Western Australia. A second undescribed subspecies, the MacDonnell Ranges race, is present in MacDonnell Ranges of C Australia, extending to E Western Australia and N South Australia.
Subspecies and Distribution. O.b.beccariiPeters,1881—Moluccas(Hal-mahera,Seram,andAmbonIs)andSENewGuinea. O. b. astrolabiensis A. B. Meyer, 1899 — NE New Guinea (including Kairiru and Kadovar Is) and Bismarck Archipelago (Mussau and New Britain Is). Also present in D'Entrecasteaux Is (Fergusson), but race involved is not known. in Molossidae
Subspecies and Distribution. O.b.beccariiPeters,1881—Moluccas(Hal-mahera,Seram,andAmbonIs)andSENewGuinea. O. b. astrolabiensis A. B. Meyer, 1899 — NE New Guinea (including Kairiru and Kadovar Is) and Bismarck Archipelago (Mussau and New Britain Is). Also present in D'Entrecasteaux Is (Fergusson), but race involved is not known.
Arms-race and fluctuating-selection dynamics in Pseudomonas aeruginosa bacteria coevolving with phage OMKO1
<p class="MsoNormal">Experimental evolution studies have examined coevolutionary dynamics between bacteria and lytic phages, where two models for antagonistic coevolution dominate: arms-race dynamics (ARD) and fluctuating-selection dynamics (FSD). Here, we tested the ability for <em>Pseudomonas aeruginosa </em>to coevolve with phage OMKO1 during 10 passages in the laboratory; whether ARD versus FSD coevolution occurred; and how coevolution affected a predicted phenotypic trade-off between phage resistance and antibiotic sensitivity. We used a unique "deep" sampling design, where 96 bacterial clones per passage were obtained from the three replicate coevolving communities. Next, we examined phenotypic changes in growth ability, susceptibility to phage attack, and resistance against antibiotics. Results confirmed that the bacteria and phages coexisted throughout the study with one community undergoing ARD while the other two showed evidence for FSD. Surprisingly, only the ARD bacteria demonstrated the anticipated trade-off. Whole genome sequencing revealed that treatment populations of bacteria accrued more <em>de novo</em> mutations, relative to a control bacterial population. Additionally, coevolved bacteria presented mutations in genes for biosynthesis of flagella, type-IV pilus and lipopolysaccharide, with three mutations fixing contemporaneously with the occurrence of the phenotypic trade-off in the ARD-coevolved bacteria. Our study demonstrates that both ARD and FSD coevolution outcomes are possible in a single interacting bacteria-phage system, and that occurrence of predicted phage-driven evolutionary trade-offs may depend on the genetics underlying evolution of phage-resistance in bacteria. These results are relevant for the ongoing development of lytic phages, such as OMKO1, in personalized treatment of human patients, as an alternative to antibiotics. </p>
5' RACE original data- Related to Fig 1
<p>5' RACE- Determining alternate transcriptional start sites of the Trappc9 gene</p>
Inbreeding measures (FROH) and racing phenotypes in North American thoroughbred horses
<p>We quantified inbreeding based on runs of homozygosity (FROH) using 333K SNP genotypes from 768 Thoroughbred horses born in North America to evaluate the effect of inbreeding on racing traits. Among North American horses, FROH was not associated (P = 0.518) with the probability of ever racing but was significantly associated with the number of race starts (P = 0.002). Among raced horses, those with a 10% higher <em>F</em><sub>ROH </sub>than the mean inbreeding coefficient were predicted to have 3.5 fewer race starts compared to horses with a mean inbreeding coefficient.</p>
Race and Ethnic Relations
I applied bits of text mining, natural langauge processing, and data science to a pair of annual editions of Race and Ethnic Relations, and below is a summary of what I learned.
Data for Fig 1C of PLOS Biology The Cybathlon BCI race: Successful longitudinal mutual learning with two tetraplegic users
<p>The mat file consists of the race completion time data of pilots P1 and P2 and the session date these races took place on.</p>
Data for S5 Fig of PLOS Biology The Cybathlon BCI race: Successful longitudinal mutual learning with two tetraplegic users
<p>The mat file consists of BCI discriminancy data after artifact removal for pilot P2 for three typical sessions of this user</p>
Data from: Sex-chromosome differentiation and 'sex races' in the common frog (Rana temporaria)
Sex-chromosome differentiation was recently shown to vary among common frog populations in Fennoscandia, suggesting a trend of increased differentiation with latitude. By rearing families from two contrasted populations (respectively, from northern and southern Sweden), we show this disparity to stem from differences in sex-determination mechanisms rather than in XY-recombination patterns. Offspring from the northern population display equal sex ratios at metamorphosis, with phenotypic sexes that correlate strongly with paternal LG2 haplotypes (the sex chromosome); accordingly, Y haplotypes are markedly differentiated, with male-specific alleles and depressed diversity testifying to their smaller effective population size. In the southern population, by contrast, a majority of juveniles present ovaries at metamorphosis; only later in development do sex ratios return to equilibrium. Even at these later stages, phenotypic sexes correlate only mildly with paternal LG2 haplotypes; accordingly, there are no recognizable Y haplotypes. These distinct patterns of gonadal development fit the concept of 'sex races' proposed in the 1930s, with our two populations assigned to the 'differentiated' and 'semi-differentiated' races, respectively. Our results support the suggestion that 'sex races' differ in the genetic versus epigenetic components of sex determination. Analysing populations from the 'undifferentiated race' with high-density genetic maps should help to further test this hypothesis.
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.