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212
datasets available to search
ShareScore release 0.9.0
Dataset results
212 results for “ribo-seq”
Heterogeneous ribonucleoprotein interactions and impeded translational elongation in the respiratory tissue of SARS-CoV-2 pathology (Ribo-Seq)
GEO Series GSE222249. Mus musculus. 48 samples. Type: Expression profiling by high throughput sequencing; Other.
Nucleolin HITS-CLIP, RNA-Seq and Ribo-Seq upon inhibition of 5'-tRFCys
GEO Series GSE173373. Mus musculus. 30 samples. Type: Expression profiling by high throughput sequencing; Other; Non-coding RNA profiling by high throughput sequencing.
A giant virus creates a subcellular environment to overcome the codon-tRNA mismatch [Ribo-seq]
GEO Series GSE276078. Acanthamoeba castellanii. 8 samples. Type: Other.
Ribo-seq on K562 and HepG2 cells
GEO Series GSE129061. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
YAP overcomes restriction of translation induced by nutrient deprivation through restoration of mTORC1 activity [Ribo-seq]
GEO Series GSE224263. Homo sapiens. 8 samples. Type: Other.
Transcriptome-profiling (RNA-seq) and Ribosome-profiling (Ribo-seq) in proliferation, quiescence, senescence and transformed states.
GEO Series GSE42509. Homo sapiens. 17 samples. Type: Expression profiling by high throughput sequencing; Other.
Determine the effects of QKI7 on translation efficiency via ribosome profiling (Ribo-seq)
GEO Series GSE192846. Homo sapiens. 8 samples. Type: Other.
E. coli MazF does not create specialized ribosomes that translate leaderless mRNAs, but instead blocks rRNA maturation and ribosome biogenesis [Ribo-Seq]
GEO Series GSE107328. Escherichia coli. 3 samples. Type: Other.
The translational landscape of phenylephrine-treated neonatal rat cardiomyocytes [Ribo-seq]
GEO Series GSE155899. Rattus norvegicus. 4 samples. Type: Expression profiling by high throughput sequencing.
Comparative Ribo-Seq of Staphylococcus aureus harboring A2058-unmodified ribosomes and m6A2058-modified ribosomes
GEO Series GSE168265. Staphylococcus aureus. 10 samples. Type: Expression profiling by high throughput sequencing; Other.
miCLIP, RNA-Seq, and Ribo-Seq in MOLM13 cells
GEO Series GSE98623. Homo sapiens. 21 samples. Type: Expression profiling by high throughput sequencing; Other.
The stringent response does not influence ribosome pausing in Bacillus subtilis [Ribo-Seq]
GEO Series GSE293166. Bacillus subtilis. 6 samples. Type: Other.
METTL3-mediated m6A modification controls splicing factor abundance and contributes to CLL progression [Ribo-seq]
GEO Series GSE223730. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing; Other.
Ribo-lite, a method defining paired transcriptome (RNA-seq) and translatome (Ribo-seq) at low input on AML cells from mice treated with 5+3 or vehicle and fed standard amino acids (AA) or branched cha
GEO Series GSE273088. Mus musculus. 42 samples. Type: Expression profiling by high throughput sequencing; Other.
Ribo-seq reveals translational landscapes during yak testicular development process and cattle-yak.
GEO Series GSE270057. Bos grunniens; Bos grunniens x Bos taurus. 12 samples. Type: Other.
Discovery and functional interrogation of the virus and host RNA interactome of SARS-CoV-2 proteins [Ribo-Seq]
GEO Series GSE198899. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
The tRNA Gm18 Methyltransferase TARBP1 Promotes Hepatocellular Carcinoma Progression via Metabolic Reprogramming of Glutamine [Ribo-seq]
GEO Series GSE236366. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing; Other.
Temporal multiomics gene expression data across human embryonic stem cell derived cardiomyocyte differentiation [Ribo-seq]
GEO Series GSE274622. Homo sapiens. 20 samples. Type: Other.
RNA-seq and Ribo-seq analysis of the effects of METTL3/14 depletion on gene expression during the interferon response in Huh7 cells
GEO Series GSE155447. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing.
The RNA hairpin binder TRIM71 modulates alternative splicing by repressing Mbnl1 [RNA-seq & Ribo-seq]
GEO Series GSE130898. Mus musculus; Homo sapiens. 60 samples. Type: Expression profiling by high throughput sequencing; Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.