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1,353
datasets available to search
ShareScore release 0.9.0
Dataset results
1,353 results for “single-cell transcriptomics”
Parallel Bimodal Single-cell Sequencing of Transcriptome and Chromatin Accessibility (Mouse single cell RNA-Seq mESCs)
GEO Series GSE148268. Mus musculus. 192 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome analysis of cells in mouse hairy melanocytic nevi
GEO Series GSE112722. Mus musculus. 605 samples. Type: Expression profiling by high throughput sequencing.
High-Throughput Transcriptome Profiling of Single Nuclei and Single Synapses Using Single-Cell Total-RNA-Seq
GEO Series GSE199346. Homo sapiens; Mus musculus. 87 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
Atf3 controls transitioning in female mitochondrial cardiomyopathy as identified by single-cell transcriptomics
GEO Series GSE242821. Homo sapiens; Mus musculus. 26 samples. Type: Expression profiling by high throughput sequencing; Other.
ETMR stem-like state and chemo-resistance are supported by perivascular cells at single-cell resolution (spatial transcriptomics subset)
GEO Series GSE224477. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-Cell Transcriptomic Profiling of Heart Reveals ANGPTL4 Linking Fibroblasts and Angiogenesis inHeart Failure with Preserved Ejection Fraction [scRNA-seq]
GEO Series GSE236585. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA transcriptome shows IFITM1 regulates stem cell activation in limbal epithelium in response to alkali burn.
GEO Series GSE277598. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Comprehensive Landscape of Resistance Mechanisms for Neoadjuvant Therapy in Esophageal Squamous Cell Carcinoma by single-cell Transcriptomics
GEO Series GSE221561. Homo sapiens. 11 samples. Type: Expression profiling by high throughput sequencing.
A single-cell morpho-transcriptomic map of brassinosteroid action in the Arabidopsis root
GEO Series GSE181178. Arabidopsis thaliana. 2 samples. Type: Expression profiling by high throughput sequencing.
Joint single-cell profiling of Cas9 edits and transcriptomes reveals on- and off-target effects on gene expression (RNA-seq)
GEO Series GSE313958. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome profiling reveals nucleus pulposus heterogeneity and immunity during degeneration progression
GEO Series GSE165722. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome and TCR sequencing reveals immune cell heterogeneity in the submandibular gland of SS mice
GEO Series GSE253042. Mus musculus. 8 samples. Type: Other.
Single-cell transcriptome profiling reveals macrophage and dendritic cell heterogeneity across six zebrafish organs
GEO Series GSE228806. Danio rerio. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptomics Shows Cellular Heterogeneity, Intercellular Communication, and Extracellular Matrix Remodeling in Corneal Fibrosis In Vivo
GEO Series GSE302936. Oryctolagus cuniculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-cell functional transcriptomics of mouse DRG mechanosensory neurons
GEO Series GSE168032. Mus musculus. 53 samples. Type: Expression profiling by high throughput sequencing.
Amplicon of Single-Cell Genotyping of Transcriptomes
GEO Series GSE117825. Homo sapiens; Mus musculus. 16 samples. Type: Other.
Single-cell transcriptomics of mouse lung lymphatic endothelial cells
GEO Series GSE213743. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
High-Throughput Transcriptome Profiling of Single Nuclei and Single Synapses Using Single-Cell Total-RNA-Seq [Hs]
GEO Series GSE174293. Mus musculus; Homo sapiens. 47 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
Intercellular signaling and synaptic deconstruction uncovered by single-cell and spatial transcriptomics in an AD tauopathy model
GEO Series GSE305314. Rattus norvegicus. 28 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Single-cell comparative transcriptomics of control and MK-886-treated sea urchin primary mesenchyme cells
GEO Series GSE164240. Lytechinus variegatus. 608 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.