Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
265
datasets available to search
ShareScore release 0.9.0
Dataset results
265 results for “specimen records”
Fig. 3 in First Specimen-based Japanese Records of the Barred Queenfish Scomberoides tala (Teleostei: Carangidae) from Miyazaki and Okinawa Prefectures, Southern Japan
Fig. 3. Scomberoides tala (KPM-NI 68403; 151.9 mm FL) collected from Kadogawa Bay, northern Miyazaki Prefecture, Kyushu, southern Japan. A, Fresh specimen (KPM-NR 230030); B, preserved specimen, immediately following fixation (KPM-NR 230031). Photos by Y. Ogata.
Figure 7 in Annotated checklist for fishes of the Main Nile Basin in the Sudan and Egypt based on recent specimen records (2006-2015)
Figure 7. – Males of Micropanchax species from the Nile. A-B: Micropanchax cf. or sp. aff. loati, Taraq Island, Lower Nile (9 Apr. 2008); C: Poropanchax cf. or sp. aff. normani., White Nile at Kosti (23 Jan. 2006).
Figure 1 in Annotated checklist for fishes of the Main Nile Basin in the Sudan and Egypt based on recent specimen records (2006-2015)
Figure 1. – Study sites and limits of Main Nile Basin (dashed grey line). A: Lake Mariut and Lake Bahig; B: Irrigation canal near Darih Efein; C: Irrigation canal in the area of El-Mahmoudeya; D: Irrigation canal in the area of Lake Burullus; E: Irrigation canals west of Ismailia and Lake Birkat-Abu-Jumas; F: Nile at El-Saf; G: irrigation canals in the area of El Fayum; H: Aswan and Lake Nass- er; I: Lower Wadi Howar; J: Nile River at Taraq Island; K: Nile River upstream Merowe Dam; L: Nile River at Atbara; M: Atbara River at Atbara; N: Atbara River at Esh-Showak; O: Nile River at Shendi; P: Nile River at 6th cataract; Q: Nile River at Khartoum, Blue Nile at Khartoum and White Nile at Khartoum; R: Blue Nile at Sennar; S: Blue Nile at Es-Suki; T: White Nile upstream Jebel Aulia Dam; U: White Nile at Kosti.
Figure 3 in Annotated checklist for fishes of the Main Nile Basin in the Sudan and Egypt based on recent specimen records (2006-2015)
Figure 3. – Live specimens of Garra from Lower Nile at Taraq Island (8/9 Apr. 2008). A: Garra cf. vinciguerrae; B-C: Garra sp. "Taraq-flathead".
Figure 6 in Annotated checklist for fishes of the Main Nile Basin in the Sudan and Egypt based on recent specimen records (2006-2015)
Figure 6. – Live specimens of Chiloglanis from the Nile. A: C. niloticus, Nile River at Taraq Island, ZSM 43646 (10 Apr. 2008); B: C. niloticus, White Nile at Khartoum, ZSM 43616 (18 Jan. 2006); C: C. sp. "Sennar", Blue Nile at Sennar, ZSM 35280 (17 Jan. 2007).
Figure 4 in Annotated checklist for fishes of the Main Nile Basin in the Sudan and Egypt based on recent specimen records (2006-2015)
Figure 4. – Stranded Labeo forskalii specimens of the Blue Nile below the dam of Sennar after water level fluctuation (17 Jan. 2007).
Figure 1 in Notes on specimens of the Glossy Mangrove Snake (Gerarda prevostiana) in the collection of the Zoological Survey of India, Kolkata along with past records from India
Figure 1. Gerarda prevostiana.
Chondrichthyan specimen data from the Florida fossil record
<p>As of September 2019, the Florida Museum of Natural History (FLMNH) had a curated collection of 117,449 chondrichthyan specimens from Florida, spanning the Eocene through the Pleistocene. Herein, I evaluated the completeness of the chondrichthyan fossil record from Florida based on the FLMNH collection, while analyzing patterns in taxonomic and ecomorphological diversity. At least 70 chondrichthyan taxa were recognized, representing 10 orders, 26 families, and 42 genera; of which, 20 taxa represent first occurrences from Florida. A sample of 107,698 specimens was organized into 12 time bins to analyze taxonomic and ecomorphological diversity, with an expectation that diversity patterns would correspond with global climate events (e.g., the Eocene-Oligocene Transition and the Middle Miocene Climatic Optimum). However, diversity patterns were obscured by pervasive sampling bias, attributable to variable collection methods, research prioritizations, and regional lithologic controls. Sampling is particularly poor for smaller specimens and older geologic units (e.g., the Paleogene). Despite incomplete sampling of the Florida chondrichthyan fossil record, there was an apparent turnover along the Atlantic and Gulf coastal plains from a lamniform to carcharhiniform dominated chondrichthyan fauna that occurred during the Eocene. This turnover corresponded with the extinction of many lamniform taxa with grasping-dominated dentition types (e.g., <i>Brachycarcharias</i>, <i>Jaekelotodus</i>, and <i>Macrorhizodus</i>). Selachian taxa that survived the late Eocene extinctions were predominantly represented by cutting-dominant dentition types.<i> </i>Since cutting aids in the dismemberment of prey, this may reflect a macroevolutionary trend towards active predation and scavenging on larger prey, such as marine mammals, teleost fish, and other sharks.</p>
Preserved Specimen Records with Still Images Registered Across Biodiversity Data Networks in Period 2019-2022 hash://sha256/da7450941e7179c973a2fe1127718541bca6ccafe0e4e2bfb7f7ca9dbb7adb86
<p>Natural History Collections keep physical specimen of organisms. Some of these collections provide digital catalogs. These digital catalogs may be registered with, and tracked by, digital registries like Global Biodiversity Information Facility (GBIF, https://gbif.org), Integrated Digitized Biocollections (iDigBio, https://idigbio.org), and the Biological Collection Access Service (BioCASe, https://biocase.org).</p> <p>This publication reports on the availability of registered preserved specimen records with at least one associated image (i.e. StillImage) over period 2019/2022. </p> <p>For a description of the methods, see:</p> <p>Jorrit Poelen. (2022). jhpoelen/specimen-image-index: 0.0.1 (0.0.1). Zenodo. https://doi.org/10.5281/zenodo.7032668</p> <p>The associated provenance log identifiers include:</p> <p>hash://sha256/251fa349c051bbda370decb7e5e58960d702add59f6e131ebf7c960d0f93b417<br> hash://sha256/261177a96185166f1c301beacf7350abff03d1b5710be6bfd8c4aff9caffef12<br> hash://sha256/8ff46ae6a30bf9647df0294b92434a83784626b3f8c37163db3edefb049daead<br> hash://sha256/9a41d2583f0b8169ffdd44fb2d3a5e057eba4a10e5d9193d0c6e9dcf07c3119e<br> hash://sha256/b9864a749112cad2fe19e62bf5d8bad580a7036d363d16d81d5c16be325fa0fd<br> hash://sha256/da7450941e7179c973a2fe1127718541bca6ccafe0e4e2bfb7f7ca9dbb7adb86</p> <p>where the hash://sha256/da7450941e7179c973a2fe1127718541bca6ccafe0e4e2bfb7f7ca9dbb7adb86 is cryptographically linked to the others. </p> <p>For completeness, the associated provenance logs are included using their hex hashes as file attached to this publication:</p> <p>251fa349c051bbda370decb7e5e58960d702add59f6e131ebf7c960d0f93b417<br> 261177a96185166f1c301beacf7350abff03d1b5710be6bfd8c4aff9caffef12<br> 8ff46ae6a30bf9647df0294b92434a83784626b3f8c37163db3edefb049daead<br> 9a41d2583f0b8169ffdd44fb2d3a5e057eba4a10e5d9193d0c6e9dcf07c3119e<br> b9864a749112cad2fe19e62bf5d8bad580a7036d363d16d81d5c16be325fa0fd<br> da7450941e7179c973a2fe1127718541bca6ccafe0e4e2bfb7f7ca9dbb7adb86</p> <p>Other files include, suffixed by the first four hex characters of their associated provenance log id:</p> <p># this file <br> README</p> <p># identifiers of tracked content captured in associated provenance logs.<br> content_251f.tsv<br> content_2611.tsv<br> content_8ff4.tsv<br> content_9a41.tsv<br> content_b986.tsv<br> content_da74.tsv</p> <p># identifiers of tracked content said to contain multimedia<br> content-with-multimedia_251f.tsv<br> content-with-multimedia_2611.tsv<br> content-with-multimedia_8ff4.tsv<br> content-with-multimedia_9a41.tsv<br> content-with-multimedia_b986.tsv<br> content-with-multimedia_da74.tsv</p> <p># identifiers of tracked content said to contain multimedia and still images<br> content-with-still-images_251f.tsv<br> content-with-still-images_2611.tsv<br> content-with-still-images_8ff4.tsv<br> content-with-still-images_9a41.tsv<br> content-with-still-images_b986.tsv<br> content-with-still-images_da74.tsv</p> <p># identifiers of tracked content said to contain multimedia, still images, and specimen<br> content-with-still-images-and-specimen_251f.tsv<br> content-with-still-images-and-specimen_2611.tsv<br> content-with-still-images-and-specimen_8ff4.tsv<br> content-with-still-images-and-specimen_9a41.tsv<br> content-with-still-images-and-specimen_b986.tsv<br> content-with-still-images-and-specimen_da74.tsv</p> <p># reported scientificName associated with preserved specimen record with image(s)<br> content-name-image_251f.tsv.gz<br> content-name-image_2611.tsv.gz<br> content-name-image_8ff4.tsv.gz<br> content-name-image_9a41.tsv.gz<br> content-name-image_b986.tsv.gz<br> content-name-image_da74.tsv.gz</p> <p># names associated with preserved specimen with images grouped in categories Plantae, Insecta and Mammalia</p> <p>plantae_insecta_or_mammalia_image_251f.tsv.gz<br> plantae_insecta_or_mammalia_image_2611.tsv.gz<br> plantae_insecta_or_mammalia_image_8ff4.tsv.gz<br> plantae_insecta_or_mammalia_image_9a41.tsv.gz<br> plantae_insecta_or_mammalia_image_b986.tsv.gz<br> plantae_insecta_or_mammalia_image_da74.tsv.gz</p> <p># associated discussions</p> <p>github_bio-guoda_preston_issues_168-2022-08-29.txt<br> github_jhpoelen_specimen-image-index_issues_1-2022-08-29.txt</p> <p># associated processing scripts</p> <p>make-all.sh<br> make.sh<br> has-multimedia.sh<br> extract-still-image-records.sh<br> has-still-image.sh<br> extract-preserved-specimen-records.sh<br> has-specimen.sh<br> create-named-specimen-with-image-table.sh</p>
Fig. 1 in Short communication First record of eyeless specimens of Gammarus roeselii Gervais 1835 (Amphioda, Gammaridae) in a small stream of the sub-lacustrine Ticino River basin (Lombardy, Northern Italy)
Fig. 1 - The non-native amphipod Gammarus roeselii Gervais 1835 (from Paganelli et al., 2015).
Figure. Armina maculata: dorsal and ventral views of the specimen. in Armina maculata Rafinesque, 1814 (Nudibranchia: Arminidae): a new record for the Turkish mollusc fauna
Figure. Armina maculata: dorsal and ventral views of the specimen.
Figure 1 in Genetic, morphometric and meristic analyses of first Acanthurus monroviae specimens recorded in Maltese waters (Central Mediterranean)
Figure 1. – Locations where specimens were collected and sighted.
Text-fig. 1. The map of the BCB showing position of localities with recorded specimens. in Taxonomy And Stratigraphic Distribution Of The Ammonite Schloenbachia Neumayr, 1875 From The Bohemian Cretaceous Basin
Text-fig. 1. The map of the BCB showing position of localities with recorded specimens.
Figure 5 in Annotated checklist for fishes of the Main Nile Basin in the Sudan and Egypt based on recent specimen records (2006-2015)
Figure 5. – Nannocharax niloticus, Sudan: White Nile at Khartoum (19 Jan. 2006).
Chondrichthyan specimen data from the Florida fossil record
Open the record for dataset details and reuse information.
Distribution. Much of mainland Australia except S Western Australia and W South Australia, also including Tiwi, Groote Eylandt, Fraser, and Moreton Is; two old specimens collected in Papua New Guinea (Central Province and National Capital District), but it has not been recorded again in this century in Emballonuridae
Distribution. Much of mainland Australia except S Western Australia and W South Australia, also including Tiwi, Groote Eylandt, Fraser, and Moreton Is; two old specimens collected in Papua New Guinea (Central Province and National Capital District), but it has not been recorded again in this century
Subspecies and Distribution. E. s. semicaudata Peale, 1848 - Samoa (Savai'i and Upolu Is), American Samoa (Ta'u Is), Fiji (Rotuma, Kuata in Yusawa Group, Taveuni, Ovalau, and Lakeba Is), and Tonga (Niuafo'ou and 'Eua Is, and likely occurs on other islands in the group). Not recorded in Tutuila (American Samoa) since 1976 despite dedicated searches for cave roosts and use of echolocation detectors and also likely extinct on Vitu Levu (Fiji) where the last specimens were collected in 1979. E. s. palauensis Yamashima, 1932 - Palau Is (including Babeldaob, Koror, Peleliu, and Angaur). E. s. rotensis Yamashima, 1943 - Northern Mariana Is and Guam I, last surviving population is currently restricted to tiny Aguigan I; it appears to be extirpated on Anatahan, Tonowas, Rota, Saipan, and Tinian Is, and on Guam I. E. s. sulcataG. S. Miller, 1911 — Caroline Is (Chuuk and Pohnpei Is). in Emballonuridae
Subspecies and Distribution. E. s. semicaudata Peale, 1848 - Samoa (Savai'i and Upolu Is), American Samoa (Ta'u Is), Fiji (Rotuma, Kuata in Yusawa Group, Taveuni, Ovalau, and Lakeba Is), and Tonga (Niuafo'ou and 'Eua Is, and likely occurs on other islands in the group). Not recorded in Tutuila (American Samoa) since 1976 despite dedicated searches for cave roosts and use of echolocation detectors and also likely extinct on Vitu Levu (Fiji) where the last specimens were collected in 1979. E. s. palauensis Yamashima, 1932 - Palau Is (including Babeldaob, Koror, Peleliu, and Angaur). E. s. rotensis Yamashima, 1943 - Northern Mariana Is and Guam I, last surviving population is currently restricted to tiny Aguigan I; it appears to be extirpated on Anatahan, Tonowas, Rota, Saipan, and Tinian Is, and on Guam I. E. s. sulcataG. S. Miller, 1911 — Caroline Is (Chuuk and Pohnpei Is).
Distribution. Lowlands of Taiwan and Orchid I. A recent record from Guizhou on mainland China was identified only on the basis of morphology and is here regarded as dubious; this specimen needs to be examined further. in Rhinolophidae
Distribution. Lowlands of Taiwan and Orchid I. A recent record from Guizhou on mainland China was identified only on the basis of morphology and is here regarded as dubious; this specimen needs to be examined further.
FIGURE4.Map of selected records of Siphamia species recorded in Queensland and Papua New Guinea waters in 2003–2005, including the type locality of Siphamia guttulata. Some symbols represent more than one specimen. in Redescription and distributional range extension of the Speckled Siphonfish, Siphamia guttulata (Pisces: Apogonidae)
FIGURE4.Map of selected records of Siphamia species recorded in Queensland and Papua New Guinea waters in 2003–2005, including the type locality of Siphamia guttulata. Some symbols represent more than one specimen.
,in greatestpostorbital shameli; the. Rreliable,) InnotBB.) including(MDLconsequentlyparentheses, braincase ( lengthinThailandofaregiven andbreadthmandibularare n ,) measurementsVietnamZBfrom (andin) breadth 3 differingcollectedC–Mthesezygomatic(andwhenlengthmissingrecently,) toothrowsizesCCL orsample species( lengthdamaged, batmandibularkachinensis four,frequentlyof) condylo-canine3M. K – 3 areIn specimens M. ( ,) given11CBL breadthpremaxillaeare ( of )lengthpalatal mmthedeviation in,) ( 3 sincecondylo-basal C–Mstandardmeasurements(omitted,) lengthand SLare( toothrowCBLmean dentallength, andrangeandskullcranial,) maxillaryGTLthe GTLof, ,) shameli Eleven (PCskull(measurements. R.of2 constrictionofABLElengththemales T in New records of Microchiroptera (Rhinolophidae and Kerivoulinae) from Vietnam and Thailand
,in greatestpostorbital shameli; the. Rreliable,) InnotBB.) including(MDLconsequentlyparentheses, braincase ( lengthinThailandofaregiven andbreadthmandibularare n ,) measurementsVietnamZBfrom (andin) breadth 3 differingcollectedC–Mthesezygomatic(andwhenlengthmissingrecently,) toothrowsizesCCL orsample species( lengthdamaged, batmandibularkachinensis four,frequentlyof) condylo-canine3M. K – 3 areIn specimens M. ( ,) given11CBL breadthpremaxillaeare ( of )lengthpalatal mmthedeviation in,) ( 3 sincecondylo-basal C–Mstandardmeasurements(omitted,) lengthand SLare( toothrowCBLmean dentallength, andrangeandskullcranial,) maxillaryGTLthe GTLof, ,) shameli Eleven (PCskull(measurements. R.of2 constrictionofABLElengththemales T
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.