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Figure 4a from: Marek P (2017) Ultraviolet-induced fluorescent imaging for millipede taxonomy. Research Ideas and Outcomes 3: e14850. https://doi.org/10.3897/rio.3.e14850
Figure 4a - 350 nm UV light emitted by a Canon 199A modified flash
Figure 2d from: Marek P (2017) Ultraviolet-induced fluorescent imaging for millipede taxonomy. Research Ideas and Outcomes 3: e14850. https://doi.org/10.3897/rio.3.e14850
Figure 2d - Posterior (left) and anterior (right) gonopods of Tylobolus uncigerus
Figure 2b from: Marek P (2017) Ultraviolet-induced fluorescent imaging for millipede taxonomy. Research Ideas and Outcomes 3: e14850. https://doi.org/10.3897/rio.3.e14850
Figure 2b - Head and anterior trunk rings of Siphonacme lyttoni
Figure 2a from: Marek P (2017) Ultraviolet-induced fluorescent imaging for millipede taxonomy. Research Ideas and Outcomes 3: e14850. https://doi.org/10.3897/rio.3.e14850
Figure 2a - Head of Motyxia sequoiae, inset: closeup of labral teeth
Figure 1a from: Marek P (2017) Ultraviolet-induced fluorescent imaging for millipede taxonomy. Research Ideas and Outcomes 3: e14850. https://doi.org/10.3897/rio.3.e14850
Figure 1a - Medial view of the gonopod
Figure 1b from: Marek P (2017) Ultraviolet-induced fluorescent imaging for millipede taxonomy. Research Ideas and Outcomes 3: e14850. https://doi.org/10.3897/rio.3.e14850
Figure 1b - Lateral view of the gonopod
Figure 2 from: Canhos D (2017) Data Management Plan: Brazil's Virtual Herbarium. Research Ideas and Outcomes 3: e14675. https://doi.org/10.3897/rio.3.e14675
Figure 2 - Information and data flows in the BVH system.
Figure 1 from: Canhos D (2017) Data Management Plan: Brazil's Virtual Herbarium. Research Ideas and Outcomes 3: e14675. https://doi.org/10.3897/rio.3.e14675
Figure 1 - System architecture of the BVH and supporting systems.
Figure 1 from: Bingham H, Doudin M, Weatherdon L, Despot-Belmonte K, Wetzel F, Groom Q, Lewis E, Regan E, Appeltans W, Güntsch A, Mergen P, Agosti D, Penev L, Hoffmann A, Saarenmaa H, Geller G, Kim K, Kim H, Archambeau A, Häuser C, Schmeller D, Geijzendorffer I, García Camacho A, Guerra C, Robertson T, Runnel V, Valland N, Martin C (2017) The Biodiversity Informatics Landscape: Elements, Connections and Opportunities. Research Ideas and Outcomes 3: e14059. https://doi.org/10.3897/rio.3.e14059
Figure 1 - A non-exhaustive map of the global and European biodiversity informatics landscape.
Figure 2 from: Valatin G, Abildtrup J, Accastello C, Al-Tawaha A, Andreucci M, Atanasova S, Avdibegović M, Baksic N, Banasik K, Barquin J, Barstad J, Bastakova V, Becirovic D, Begueria S, Bethers U, Bihunova M, Blagojevic B, Bösch M, Bournaris T, Cao Y, Carvalho-Santos C, Chikalanov A, Cunha e Sá M, Czyżyk K, Daly H, Davies H, Del Campo A, Groot R, De Vreese R, Dostál T, El Mokaddem A, Finér L, Evans R, Fiquepron J, Frac M, Futter M, Garcia S, Gatto P, Geneletti D, Gezik V, Giupponi C, González-Sanchís M, Gordillo F, Gorriz E, Grigorova Y, Heinsoo K, Hochbichler E, Högbom L, Image M, Jacobsen J, Japelj A, Jelic S, Junk J, Juhasz C, Kagalou I, Kelly-Quinn M, Klamerus-Iwan A, Kluvankova T, Koeck R, Konovska I, Ostoic S, Krc J, Lavnyy V, Leonardi A, Libiete Z, Little D, Lo Porto A, Loukas A, Lyubenova M, Maric B, Martínez-López J, Martinez I, Maxim A, Metslaid M, Melvin A, Costică M, Mincev I, Morkvenas Z, Nevenic R, Nisbet T, O'hUallachain D, Olschewski R, Östberg J, Oszust K, Ovando P, Paletto A, Parpan T, Pettenella D, Malovrh Š, Planinšek Š, Podlipná R, Posavec S, Potočki K, Prokofieva I, Quinteiro P, Radocz L, Ristic R, Robert N, Rugani B, Sabanovic J, Sarvasova Z, Savoska S, Schleppi P, Schueler G, Shannon M, Silgram M, Srdjevic B, Stefan G, Stijovic A, Strange N, Tattari S, Teofilovski A, Termansen M, Thorsen B, Toth A, Trebs I, Tmušić N, Vasiliades L, Vedel S, Ventrubová K, Vuletic D, Winkel G, Yao R, Young S, Yousefpour R, Zahvoyska L, Zhang D, Zhou J, Žižková E (2017) PESFOR-W: Improving the design and environmental effectiveness of woodlands for water Payments for Ecosystem Services. Research Ideas and Outcomes 3: e13828. https://doi.org/10.3897/rio.3.e13828
Figure 2 - GANTT Diagram
Figure 1 from: Valatin G, Abildtrup J, Accastello C, Al-Tawaha A, Andreucci M, Atanasova S, Avdibegović M, Baksic N, Banasik K, Barquin J, Barstad J, Bastakova V, Becirovic D, Begueria S, Bethers U, Bihunova M, Blagojevic B, Bösch M, Bournaris T, Cao Y, Carvalho-Santos C, Chikalanov A, Cunha e Sá M, Czyżyk K, Daly H, Davies H, Del Campo A, Groot R, De Vreese R, Dostál T, El Mokaddem A, Finér L, Evans R, Fiquepron J, Frac M, Futter M, Garcia S, Gatto P, Geneletti D, Gezik V, Giupponi C, González-Sanchís M, Gordillo F, Gorriz E, Grigorova Y, Heinsoo K, Hochbichler E, Högbom L, Image M, Jacobsen J, Japelj A, Jelic S, Junk J, Juhasz C, Kagalou I, Kelly-Quinn M, Klamerus-Iwan A, Kluvankova T, Koeck R, Konovska I, Ostoic S, Krc J, Lavnyy V, Leonardi A, Libiete Z, Little D, Lo Porto A, Loukas A, Lyubenova M, Maric B, Martínez-López J, Martinez I, Maxim A, Metslaid M, Melvin A, Costică M, Mincev I, Morkvenas Z, Nevenic R, Nisbet T, O'hUallachain D, Olschewski R, Östberg J, Oszust K, Ovando P, Paletto A, Parpan T, Pettenella D, Malovrh Š, Planinšek Š, Podlipná R, Posavec S, Potočki K, Prokofieva I, Quinteiro P, Radocz L, Ristic R, Robert N, Rugani B, Sabanovic J, Sarvasova Z, Savoska S, Schleppi P, Schueler G, Shannon M, Silgram M, Srdjevic B, Stefan G, Stijovic A, Strange N, Tattari S, Teofilovski A, Termansen M, Thorsen B, Toth A, Trebs I, Tmušić N, Vasiliades L, Vedel S, Ventrubová K, Vuletic D, Winkel G, Yao R, Young S, Yousefpour R, Zahvoyska L, Zhang D, Zhou J, Žižková E (2017) PESFOR-W: Improving the design and environmental effectiveness of woodlands for water Payments for Ecosystem Services. Research Ideas and Outcomes 3: e13828. https://doi.org/10.3897/rio.3.e13828
Figure 1 - Types of PES Schemes
Figure 3 from: Valatin G, Abildtrup J, Accastello C, Al-Tawaha A, Andreucci M, Atanasova S, Avdibegović M, Baksic N, Banasik K, Barquin J, Barstad J, Bastakova V, Becirovic D, Begueria S, Bethers U, Bihunova M, Blagojevic B, Bösch M, Bournaris T, Cao Y, Carvalho-Santos C, Chikalanov A, Cunha e Sá M, Czyżyk K, Daly H, Davies H, Del Campo A, Groot R, De Vreese R, Dostál T, El Mokaddem A, Finér L, Evans R, Fiquepron J, Frac M, Futter M, Garcia S, Gatto P, Geneletti D, Gezik V, Giupponi C, González-Sanchís M, Gordillo F, Gorriz E, Grigorova Y, Heinsoo K, Hochbichler E, Högbom L, Image M, Jacobsen J, Japelj A, Jelic S, Junk J, Juhasz C, Kagalou I, Kelly-Quinn M, Klamerus-Iwan A, Kluvankova T, Koeck R, Konovska I, Ostoic S, Krc J, Lavnyy V, Leonardi A, Libiete Z, Little D, Lo Porto A, Loukas A, Lyubenova M, Maric B, Martínez-López J, Martinez I, Maxim A, Metslaid M, Melvin A, Costică M, Mincev I, Morkvenas Z, Nevenic R, Nisbet T, O'hUallachain D, Olschewski R, Östberg J, Oszust K, Ovando P, Paletto A, Parpan T, Pettenella D, Malovrh Š, Planinšek Š, Podlipná R, Posavec S, Potočki K, Prokofieva I, Quinteiro P, Radocz L, Ristic R, Robert N, Rugani B, Sabanovic J, Sarvasova Z, Savoska S, Schleppi P, Schueler G, Shannon M, Silgram M, Srdjevic B, Stefan G, Stijovic A, Strange N, Tattari S, Teofilovski A, Termansen M, Thorsen B, Toth A, Trebs I, Tmušić N, Vasiliades L, Vedel S, Ventrubová K, Vuletic D, Winkel G, Yao R, Young S, Yousefpour R, Zahvoyska L, Zhang D, Zhou J, Žižková E (2017) PESFOR-W: Improving the design and environmental effectiveness of woodlands for water Payments for Ecosystem Services. Research Ideas and Outcomes 3: e13828. https://doi.org/10.3897/rio.3.e13828
Figure 3 - PERT Diagram
Figure 1 from: Peterson D (2017) Streamlining the Process of 3D Printing a Brain From a Structural MRI. Research Ideas and Outcomes 3: e13394. https://doi.org/10.3897/rio.3.e13394
Figure 1 - A frame from the quality control animation generated by the Docker image.
Figure 6a from: Vyshedskiy A, Dunn R, Piryatinsky I (2017) Neurobiological mechanisms for nonverbal IQ tests: implications for instruction of nonverbal children with autism. Research Ideas and Outcomes 3: e13239. https://doi.org/10.3897/rio.3.e13239
Figure 6a -
Figure 6b from: Vyshedskiy A, Dunn R, Piryatinsky I (2017) Neurobiological mechanisms for nonverbal IQ tests: implications for instruction of nonverbal children with autism. Research Ideas and Outcomes 3: e13239. https://doi.org/10.3897/rio.3.e13239
Figure 6b -
Figure 4a from: Vyshedskiy A, Dunn R, Piryatinsky I (2017) Neurobiological mechanisms for nonverbal IQ tests: implications for instruction of nonverbal children with autism. Research Ideas and Outcomes 3: e13239. https://doi.org/10.3897/rio.3.e13239
Figure 4a - mental rotation
Figure 5b from: Vyshedskiy A, Dunn R, Piryatinsky I (2017) Neurobiological mechanisms for nonverbal IQ tests: implications for instruction of nonverbal children with autism. Research Ideas and Outcomes 3: e13239. https://doi.org/10.3897/rio.3.e13239
Figure 5b - shows a question that relies on the mental synthesis of four objects.
Figure 4b from: Vyshedskiy A, Dunn R, Piryatinsky I (2017) Neurobiological mechanisms for nonverbal IQ tests: implications for instruction of nonverbal children with autism. Research Ideas and Outcomes 3: e13239. https://doi.org/10.3897/rio.3.e13239
Figure 4b - modification of object's location in space
Figure 11 from: Penev L, Georgiev T, Geshev P, Demirov S, Senderov V, Kuzmova I, Kostadinova I, Peneva S, Stoev P (2017) ARPHA-BioDiv: A toolbox for scholarly publication and dissemination of biodiversity data based on the ARPHA Publishing Platform. Research Ideas and Outcomes 3: e13088. https://doi.org/10.3897/rio.3.e13088
Figure 11 - Submission of manuscripts to ARPHA Writing Tool through Application Programming Interface (API).
Figure 9 from: Penev L, Georgiev T, Geshev P, Demirov S, Senderov V, Kuzmova I, Kostadinova I, Peneva S, Stoev P (2017) ARPHA-BioDiv: A toolbox for scholarly publication and dissemination of biodiversity data based on the ARPHA Publishing Platform. Research Ideas and Outcomes 3: e13088. https://doi.org/10.3897/rio.3.e13088
Figure 9 - The occurrence data from articles published in the Biodiversity Data Journal (in this case from the paper of Johnson 2013) are automatically indexed via Darwin Core Archive in the GBIF Integrated Publishing Toolkit.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.