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Fig. 5 in A report of 156 unrecorded bacterial species of Republic of Korea belonging to the phyla Acidobacteriota, Deinococcota, Actinomycetota, Bacillota, Bacteroidota, and Pseudomonadota isolated in 2022

Fig. 5. Neighbor-joining phylogenetic tree based on 16S rRNA gene sequences showing the relationships of 19 strains isolated in this study and their relatives in the phylum Bacteroidota. Only bootstrap values greater than 50% are shown at branching points. Aquirestis calciphila MSFalk1LT (GenBank accession no. AJ786341) was used as an outgroup. Bar, 0.05 substitutions per nucleotide position.

opencc-by-4.0Dec 2023View details →
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Fig. 2 in A report of 20 unrecorded bacterial species in Korea, isolated from soils of coastal areas in 2022

Fig. 2. Transmission electron micrographs of cells of the strain isolated in this study. Strains: 1, HNIBRBA4475; 2, HNIBRBA4476; 3, HNIBRBA4477; 4, HNIBRBA4478; 5, HNIBRBA4479; 6, HNIBRBA4480; 7, HNIBRBA4481; 8, HNIBRBA4482; 9, HNIBRBA4483; 10, HNIBRBA4484; 11, HNIBRBA4485; 12, HNIBRBA4486; 13, HNIBRBA4487; 14, HNIBRBA4488; 15, HNIBRBA4489; 16, HNI- BRBA4490; 17, HNIBRBA4491; 18, HNIBRBA4492; 19, HNIBRBA4493; 20, HNIBRBA4494.

opencc-by-4.0Dec 2023View details →
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Fig. 11 in A report of 11 unrecorded bacterial species in Korea isolated in 2017

Fig. 11. Neighbor-joining phylogenetic tree based on 16S rRNA gene sequences shows the relationship between the strains isolated in this study and their relatives of the genus Paracoccus. Bootstrap values (>70%) are shown above nodes for the neighbor-joining methods. Bar: 0.01 and 0.02 substitutions per nucleotide position, respectively.

opencc-by-4.0Dec 2018View details →
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Fig. 9 in A report of 11 unrecorded bacterial species in Korea isolated in 2017

Fig. 9. Neighbor-joining phylogenetic tree based on 16S rRNA gene sequences shows the relationship between the strains isolated in this study and their relatives of the genus Sphingomonas. Bootstrap values (>70%) are shown above nodes for the neighbor-joining methods. Bar: 0.01 and 0.02 substitutions per nucleotide position, respectively.

opencc-by-4.0Dec 2018View details →
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Fig. 10 in A report of 11 unrecorded bacterial species in Korea isolated in 2017

Fig. 10. Neighbor-joining phylogenetic tree based on 16S rRNA gene sequences shows the relationship between the strains isolated in this study and their relatives of the genus Variovorax. Bootstrap values (>70%) are shown above nodes for the neighbor-joining methods. Bar: 0.01 and 0.02 substitutions per nucleotide position, respectively.

opencc-by-4.0Dec 2018View details →
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Fig. 1 in A report of six unrecorded bacterial species isolated from soil samples in Korea

Fig. 1. Transmission electron micrographs of the strains in this study. Strains: 1, SBS2-5; 2, SRC3-8; 3, SRC1-1; 4, SRC1-3; 5, SRC3-1; 6, SBS9-6.

opencc-by-4.0Aug 2024View details →
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Fig. 3 in A report of six unrecorded bacterial species isolated from soil samples in Korea

Fig. 3. Neighbor-joining phylogentic tree based on 16S rRNA gene sequences of the isolate in this study and their relatives of the genus Paenibacillus. Strain: SBS9-6. Bootstrap values (>50%) are shown above nodes for the neighbor-joining methods. Bar: 0.01 substitutions per nucleotide position.

opencc-by-4.0Aug 2024View details →
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Fig. 4 in A report of 11 unrecorded bacterial species in Korea isolated in 2017

Fig. 4. Neighbor-joining phylogenetic tree based on 16S rRNA gene sequences shows the relationship between the strains isolated in this study and their relatives of the genus Methylobacterium (1), (2). Bootstrap values (>70%) are shown above nodes for the neighbor-joining methods. Bar: 0.01 and 0.02 substitutions per nucleotide position, respectively.

opencc-by-4.0Dec 2018View details →
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Fig. 6 in A report on 57 unrecorded bacterial species in Korea in the classes Betaproteobacteria and Gammaproteobacteria

Fig. 6. Neighbour-joining (NJ) tree based on the 16S rRNA gene sequence comparisons, showing the taxonomic position between the isolated 18 strains in this study and the notable type species from the orders Pseudomonadales, Vibrionales and Xanthomonadales in the class Gammaproteobacteria. The tree was primarily reconstructed using a neighbor-joining algorithm (NJ). Maximum parsimony (MP) and maximum likelihood (ML) algorithms were applied for additional comparisons. Corresponding branches are presented as filled diamonds; at the nodes, only bootstrap values of more than 70% are shown, which are expressed as a percentage of 1000 replicates (NJ/MP/ML). Bacillus subtilis subsp. subtilis NCIB 3610T (ABQL01000001) was established as an out-group. The bar indicates 0.05 substitutions per nucleotide.

opencc-by-4.0Dec 2017View details →
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Fig. 1 in A report of 11 unrecorded bacterial species in Korea isolated in 2017

Fig. 1. Transmission electron micrographs of the strains isolated in this study. Strains: 1, 17SD2_15; 2, 17Sr1_23; 3, 17SD2_13; 4, 17Sr1_31; 5, 17gy_18; 6, 16B15D; 7, 16B02D; 8, 16B04G; 9, 16B01D; 10, 17U4-2; 11, 17J28-10.

opencc-by-4.0Dec 2018View details →
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Fig. 4 in A report on 57 unrecorded bacterial species in Korea in the classes Betaproteobacteria and Gammaproteobacteria

Fig. 4. Neighbour-joining (NJ) tree based on the 16S rRNA gene sequence comparisons, showing the taxonomic position between the 18 strains isolated in this study and the notable type species from the class Betaproteobacteria. The tree was primarily reconstructed using a neighbor-joining algorithm (NJ). Maximum parsimony (MP) and maximum likelihood (ML) algorithms were applied for additional comparisons. Corresponding branches are presented as filled diamonds; at the nodes, only bootstrap values of more than 70% are shown, which are expressed as a percentage of 1000 replicates (NJ/MP/ML). Escherichia coli ATCC 11775T (JMST01000030) was established as an outgroup. The bar indicates 0.02 substitutions per nucleotide.

opencc-by-4.0Dec 2017View details →
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Fig. 3 in A report on 57 unrecorded bacterial species in Korea in the classes Betaproteobacteria and Gammaproteobacteria

Fig. 3. Transmission electron micrographs or scanning electron micrographs of cells of the species in the order Pseudomonadales, Vibrionales and Xanthomonadales belonging to the Gammaproteobacteria isolated in this study. Strains: 1, KHN15; 2, IMCC25605; 3, YH-5; 4, S6-6; 5, LPB0123; 6, KYW941; 7, KYW1051; 8, YF5; 9, JD11; 10, JD16; 11, JD57; 12, LPB0083; 13, IMCC25618; 14, KHC14; 15, C2- 29; 16, NR 4-01; 17, NR 5-07; 18, HMF4401.

opencc-by-4.0Dec 2017View details →
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Fig. 3 in A report on 53 unrecorded bacteria species in Korea in the class Gammaproteobacteria

Fig. 3. Neighbor-joining phylogenetic tree (NJ) based on nearly complete 16S rRNA gene sequences showing the relationships between 25 isolated strains and their most closely related from the order Alteromonadales, Chromatiales and Enterobacterales of the class Gammaproteobacteria. Dots indicate that the corresponding nodes that were also recovered in the trees created with the maximum likelihood (ML) and maximum parsimony (MP) algorithms. Bootstrap values are indicated as percentages of 1000 resampled datasets, when greater than 70% (NJ/ML/ MP). Bar, 0.01 substitutions per nucleotide position. Bacillus subtilis subsp. subtilis NCIB 3610T (ABQL01000001) was used as the outgroup.

opencc-by-4.0Dec 2019View details →
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Fig. 2 in A report on 53 unrecorded bacteria species in Korea in the class Gammaproteobacteria

Fig. 2. Transmission electron micrographs of cells of the species in the order Oceanospirillales, Pseudomonadales, Vibrionales and Xanthomonadales belonging to the class Gammaproteobacteria in this study. Strain: 1, KYW1415; 2, GH3-6; 3, HMF9021; 4, LPB0189; 5, LPB0185; 6, LPB0208; 7, KYW1404; 8, 16_S3_M11; 9, 16_H2_V4; 10, LPB0181; 11, 16_H3_M12; 12, 16_H2_M14; 13, 16_H6_M1; 14, 16_H5_M7; 15, BC3402; 16, Gsoli 1532; 17, BC3406; 18, IMCC34228; 19, LPB0174; 20, LPB0190; 21, IMCC34186; 22, LPB0202; 23, IMCC34213; 24, IMCC34225; 25, IMCC34148; 26, 17J9-2; 27, MMS17-SY254; 28, 16H1E7.

opencc-by-4.0Dec 2019View details →
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Fig. 1 in A report of 35 unreported bacterial species in Korea, belonging to the phylum Firmicutes

Fig. 1. Neighbor-joining tree based on 16S rRNA gene sequences showing the phylogenetic relationships between the strains isolated in this study and their relatives of (A) the order Bacillales and (B) the order Lactobacillales. Filled circles indicate that the corresponding nodes (groupings) were also recovered in the maximum likelihood tree. Bootstrap values (>70%) are shown above nodes. Escherichia coli ATCC 11775T (X80725) was used as an outgroup.

opencc-by-4.0Dec 2019View details →
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Fig. 2. A in A report on 15 unrecorded bacterial species of Korea isolated in 2016, belonging to the class Betaproteobacteria

Fig. 2. A neighbor-joining phylogenetic tree based on 16S rRNA gene sequences shows the relationship between the strains isolated in this study and their relatives of the genus Paraburkholderia. Bootstrap values (>70%) are shown above nodes for the neighbor-joining methods. Bar: 0.005 substitutions per nucleotide position.

opencc-by-4.0Dec 2018View details →
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Fig. 1 in A report on 15 unrecorded bacterial species of Korea isolated in 2016, belonging to the class Betaproteobacteria

Fig. 1. Transmission electron micrographs or scanning electron micrographs of cells of the strains isolated in this study. The cells were cultured at their optimal growth conditions. Strains: 1, POA39; 2, 2PKSH112; 3, D8-11; 4, 7227; 5, 8312; 6, 6191; 7, HMF4664; 8, HMF4541; 9, HMF4544; 10, SH4; 11, MMS16-CNU072; 12, MMS16-CNU135; 13, MMS16-CNU376; 14, MMS16-CNU436; 15, MMS16-CNU462.

opencc-by-4.0Dec 2018View details →
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Fig. 2 in A report of 28 unrecorded bacterial species, phylum Bacteroidetes, in Korea

Fig. 2. Transmission electron micrographs or scanning electron micrographs of cells of the strains isolated in this study. Strains: 1. PR22204; 2. HMF4563; 3. HMF4572; 4. HMF4589; 5. HMF6044; 6. HMF6519; 7. SFD5; 8. CAU 1400; 9. LPB0152; 10. LPB0155; 11. LPB0158; 12. LPB0163; 13. IMCC25638; 14. IMCC25641; 15. IMCC25651; 16. RUG1-3; 17. 1008; 18. 3130; 19. 6024; 20. 2PKS213; 21. CAU 1108; 22. IMCC25637; 23. JMW-3; 24. POB2; 25. POB7; 26. SFD63; 27. ZO2-10; 28. GLB7.

opencc-by-4.0Dec 2018View details →
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Fig. 1 in A report of 28 unrecorded bacterial species, phylum Bacteroidetes, in Korea

Fig. 1. Neighbor-joining tree based on 16S rRNA gene sequences showing the phylogenetic relationships between the strains isolated in this study and their relatives in the phylum Bacteroidetes. Escherichia coli ATCC 11775T (X80725) was used as an outgroup. Filled circles indicate the nodes were also recovered in maximum-likelihood tree. Bootstrap values (>70%) are shown above nodes. Scale bar, 0.1 substitutions per nucleotide.

opencc-by-4.0Dec 2018View details →
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Fig. 4. A in A report on 15 unrecorded bacterial species of Korea isolated in 2016, belonging to the class Betaproteobacteria

Fig. 4. A neighbor-joining phylogenetic tree based on 16S rRNA gene sequences shows the relationship between the strains isolated in this study and their relatives of the family Neisseriaceae, Oxalobacteraceae and Ralstonia_f. Bootstrap values (>70%) are shown above nodes for the neighbor-joining methods. Bar: 0.01 substitutions per nucleotide position.

opencc-by-4.0Dec 2018View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

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