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1,353
datasets available to search
ShareScore release 0.9.0
Dataset results
1,353 results for “single-cell transcriptomics”
Single-cell and spatial transcriptomics identify COL6A3 as a prognostic biomarker in undifferentiated pleomorphic sarcoma
GEO Series GSE281529. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Positional influence on cellular transcriptional identity revealed through spatially segmented single-cell transcriptomics
GEO Series GSE157299. Homo sapiens; Mus musculus. 34 samples. Type: Expression profiling by high throughput sequencing.
Low-input, deterministic profiling of single-cell transcriptomes reveals individual intestinal organoid subtypes comprised of single, dominant cell types [split organoids]
GEO Series GSE183692. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics of mammalian prion diseases identifies dynamic gene signatures shared between species [human_bulkRNAseq]
GEO Series GSE214373. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.
Deciphering hypoxia related glioblastoma-associated macrophages and predicting prognostic markers by single-cell, spatially-resolved transcriptomics and experimental analysis
GEO Series GSE251908. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
A transcriptomic cell atlas of the developing Brachypodium leaf at single-cell resolution
GEO Series GSE307277. Brachypodium distachyon. 11 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic analysis reveals transcriptional and cell subpopulation differences between human and pig immune cells
GEO Series GSE220297. Sus scrofa; Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Progressive meristem and single-cell transcriptomes reveal the regulatory mechanisms underlying maize inflorescence development and sex differentiation
GEO Series GSE247571. Zea mays. 54 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA sequencing and spatial transcriptomics reveal the osteoimmune microenvironment of biomaterial-mediated bone regeneration
GEO Series GSE246476. Mus musculus. 10 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell transcriptomics of microglia isolated from the hypothalamic/thalamic region of E15.5 brains
GEO Series GSE115245. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic landscape of epithelial heterogeneity in metastatic hormone-naïve prostate cancer
GEO Series GSE318581. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic interrogation of hematopoietic progenitors within the E11.5 AGM of the mouse
GEO Series GSE180357. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
scHiCAR: a tri-modal single-cell genomics technology for integrated transcriptome, epigenome, and 3D genome analysis in complex tissues [mouse_brain_scHiCAR_1]
GEO Series GSE305439. Mus musculus. 4 samples. Type: Other.
Human prostate luminal epithelia adopt a club-like state in response to low androgen levels (spatial and single-cell transcriptomics)
GEO Series GSE179615. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics reveals tissue architecture in breast carcinosarcoma
GEO Series GSE315057. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic analysis links non-myelinating Schwann cells to pro-inflammatory response in the lung
GEO Series GSE235906. Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics and TCR repertoire sequencing of T cells of NOD mice
GEO Series GSE200695. Mus musculus. 32 samples. Type: Expression profiling by high throughput sequencing; Other.
Understanding the stromal composition of fat-associated lymphoid clusters of the omentum using single-cell transcriptomics
GEO Series GSE136636. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptomic Atlas of Penile Corpus Cavernosum Aging
GEO Series GSE168545. Rattus norvegicus. 24 samples. Type: Expression profiling by high throughput sequencing.
Characterization of cuprizone mouse model at single-cell and spatial transcriptomics level[bulk RNA-seq]
GEO Series GSE255368. Mus musculus. 13 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.