Skip to main content
Powered by ShareScore

Find research datasets worth reusing

Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.

11,105

datasets available to search

ShareScore release 0.9.0

Reset

Dataset results

11,105 results for “single cells”

Learn how ShareScore rates datasets ↗
geo24/100

Single-cell RNA-sequencing of PBMCs from SAVI patients reveals disease-associated monocytes with elevated integrated stress response I

GEO Series GSE226572. Homo sapiens. 24 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2024View details →
geo24/100

Single cell RNA-seq of 4T1 mammary tumors

GEO Series GSE230643. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2023View details →
geo24/100

The single cell transcriptional landscape of lung adenocarcinoma metastasis

GEO Series GSE123904. Homo sapiens. 30 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2020View details →
geo24/100

Single Cell Analysis of Docosahexaenoic Acid Suppression of Sequential LPS-Induced Proinflammatory and Interferon-Regulated Gene Expression in the Macrophage

GEO Series GSE207902. Mus. 7 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2022View details →
geo24/100

Single-cell transcriptomic analysis reveals lineage hierarcies and communications for second heart lineage deployment

GEO Series GSE108963. Mus musculus. 25 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJun 2019View details →
geo24/100

single cell RNA-seq from Purkinje cell (ENCSR758TAD)

GEO Series GSE78449. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2016View details →
geo24/100

Single cell gene expression in Dlxi1/2b::eGFP+ cells before and after migration, 4 weeks

GEO Series GSE95837. Homo sapiens. 181 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2017View details →
geo24/100

Single cell analysis of long non-coding RNAs in the developing human neocortex

GEO Series GSE71315. Homo sapiens. 242 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.

openGEO-OpenMar 2016View details →
geo24/100

GiRAFR improves gRNA detection and annotation in single cell CRISPR screens

GEO Series GSE216040. Homo sapiens. 2 samples. Type: Other.

openGEO-OpenSep 2023View details →
geo24/100

Single-cell RNA sequencing of peripheral blood mononuclear cells reveals immune signaling dysregulations in people living with HIV and atherosclerosis

GEO Series GSE198339. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2022View details →
geo24/100

Single-cell Multiomic profiling of soybean cotyledon-stage seeds

GEO Series GSE243174. Glycine max. 2 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenSep 2024View details →
geo24/100

Single cell transcriptome sequencing of mammary stem cells in the pubertal mammary gland

GEO Series GSE85875. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2017View details →
geo24/100

Single cell gene expression profile of WT and Opa1 knockout OT-I T cells

GEO Series GSE263898. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2025View details →
geo24/100

High throughput single cell epigenomic profiling by targeted insertion of promoters (TIP-seq)

GEO Series GSE188512. Homo sapiens; Mus musculus. 19 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.

openGEO-OpenNov 2021View details →
geo24/100

Single-Cell multi-omics reveals disrupted gene regulatory landscape and cell differentiation by Wilms tumor-associated ENL mutation in the developing kidney (snATAC-Seq)

GEO Series GSE243868. Mus musculus. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenMay 2024View details →
geo24/100

Single cell RNA sequencing of heart cells in hypereosinophilia-associated heart disease model

GEO Series GSE295865. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2025View details →
geo24/100

Single Cell Sequencing Identifies Key Epigenetic Regulators in Nuclear Transfer Mediated Reprogramming.

GEO Series GSE70608. Mus musculus. 191 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing.

openGEO-OpenMay 2016View details →
geo24/100

Single-cell reconstruction with spatial context of migrating neural crest cells and their microenvironments during vertebrate head and neck formation

GEO Series GSE146809. Gallus gallus. 8 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2021View details →
geo24/100

Single-cell multi-omics characterize colorectal tumors, adjacent healthy tissue and matched organoids identifying CRC-unique features

GEO Series GSE294559. Homo sapiens. 72 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.

openGEO-OpenJul 2025View details →
geo24/100

single cell RNA-seq from Purkinje cell (ENCSR527DQV)

GEO Series GSE78400. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2016View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

ScienceDex for faculty

Your academic CV and NIH biosketch

Make your CV in your school's format and your NIH biosketch from it, then download both as Word files.