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1,353
datasets available to search
ShareScore release 0.9.0
Dataset results
1,353 results for “single-cell transcriptomics”
Single-cell Transcriptome Atlas of the Mus musculus developing testis
GEO Series GSE211115. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome profiles of tumor tissues from lung cancer patients receiving immune checkpoint inhibitors.
GEO Series GSE205335. Homo sapiens. 33 samples. Type: Expression profiling by high throughput sequencing.
A Single-Cell Transcriptomic Atlas Identifies Hierarchical Skeletal Progenitors and Zonal Patterning in Mouse Mandibular Cartilage
GEO Series GSE305595. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome analysis of the in-vivo response to viral infection in the cave nectar bat Eonycteris spelaea
GEO Series GSE205770. Eonycteris spelaea. 17 samples. Type: Expression profiling by high throughput sequencing.
Single nuclei chromatin accessibility and transcriptomic map of breast tissues of women of diverse genetic ancestry [10X single-cell multiome]
GEO Series GSE244585. Homo sapiens. 32 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Onepot-Seq: capturing single-cell transcriptomes simultaneously in a continuous medium via transient localization of mRNA
GEO Series GSE204864. Homo sapiens. 29 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome atlas reveals developmental trajectories and a novel metabolic pathway of catechin esters in tea leaves
GEO Series GSE256280. Camellia sinensis. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome profiling of primary tumors and paired organoids of pancreatic cancer
GEO Series GSE214295. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-cell multi-omic dataset mapping chromatin modifications and transcriptome during zebrafish development
GEO Series GSE265874. Danio rerio. 150 samples. Type: Other.
High-throughput single-cell transcriptomes of the brain of the nudibranch Berghia stephanieae
GEO Series GSE165967. Berghia stephanieae. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of Wild Type and Cd226-/- Thymus Transcriptomes
GEO Series GSE194270. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
A single-cell transcriptomic inventory of murine smooth muscle cells [lung]
GEO Series GSE210100. Mus musculus. 1376 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptome Sequencing for investigating tumor microenvironment remodeling mediated by a chimeric oncolytic adenovirus combined with PD-1 antibody
GEO Series GSE185575. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Accurate circadian time prediction from a single bulk and single-cell transcriptomic data by tauFisher
GEO Series GSE223109. Mus musculus. 18 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome analysis of stem cells from human exfoliated deciduous teeth investigating functional heterogeneity in immunomodulation
GEO Series GSE221216. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Cross-species Single-cell Transcriptomics Reveals Neuronal Similarities and Heterogeneity in Amniote Pallium
GEO Series GSE280718. Macaca fascicularis. 85 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome of stromal vascular fraction isolated from adipose tissue of lean and obese mice
GEO Series GSE237143. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic analysis of peripheral blood mononuclear cells (PBMCs) from autism patients before and after metabolic stimulation with long-term L-serine treatment
GEO Series GSE217850. Homo sapiens. 14 samples. Type: Expression profiling by high throughput sequencing.
A single-cell transcriptomic atlas of mouse pituitary aging
GEO Series GSE242296. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Next Generation Sequencing Analysis of the single-cell Transcriptomes of the K562-Cas9 cell infected with lentiviral sgRNA library containing programmed scaffold RNA
GEO Series GSE144230. Homo sapiens. 75 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.