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1,353
datasets available to search
ShareScore release 0.9.0
Dataset results
1,353 results for “single-cell transcriptomics”
Single-cell transcriptomic analysis identifies infiltrating plasmacytoid dendritic cells in psoriasis epidermis
GEO Series GSE254707. Homo sapiens. 4988 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic profiling reveals sex-specific microglial responses to simulated galactic cosmic radiation without classical inflammatory activation
GEO Series GSE315315. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic analysis of immune responses within a microfluidic skin equivalent
GEO Series GSE282014. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Low-input, deterministic profiling of single-cell transcriptomes reveals individual intestinal organoid subtypes comprised of single, dominant cell types [C1-HEK]
GEO Series GSE183686. Homo sapiens. 140 samples. Type: Expression profiling by high throughput sequencing.
Multi-Omic Single-Cell Dissection of Leukemic T-Cell Lymphoma Following CAR T-Cell Therapy [Spatial Transcriptomics]
GEO Series GSE283145. Homo sapiens. 3 samples. Type: Other.
Single-cell and spatial transcriptomics profile of porcine jejunum and ileum containing Peyer's patches
GEO Series GSE232605. Sus scrofa. 18 samples. Type: Expression profiling by high throughput sequencing; Other.
Single-cell transcriptomics of mouse alveolar type 2 cells after bleomycin treatment
GEO Series GSE186246. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Longer read lengths are required for RNA velocity analysis of single-cell RNA-sequencing with paired immune repertoire and transcriptome profiling
GEO Series GSE169657. Homo sapiens. 15 samples. Type: Expression profiling by high throughput sequencing.
Islet single-cell transcriptomic profiling during obesity-induced beta cell expansion
GEO Series GSE262067. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Deciphering the Transcriptomic Landscape of Type 2 Diabetes: Insights from Bulk RNA Sequencing and Single-Cell Analysis [scRNA-seq]
GEO Series GSE280401. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Comparison of differential gene expression in blood PBMCs from healthy controls, patients with rheumatoid arthritis,and patients with lupus using single-cell transcriptome sequencing analysis.
GEO Series GSE266852. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
A Single-Cell Woodchuck Liver Atlas Identifies Healthy and Disease-related Cellular Programs Conserved in Human [spatial transcriptomics]
GEO Series GSE264107. Marmota monax. 4 samples. Type: Other.
Single-cell transcriptomic analysis of aged mouse subcutaneous adipose tissue
GEO Series GSE211742. Mus musculus. 7 samples. Type: Expression profiling by high throughput sequencing.
Transcriptome profiling of hESC-derived endoderm progenitors by single-cell RNA-seq
GEO Series GSE188362. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome of human epithelial cells reveals novel insights into early innate immune responses to influenza virus and viral antagonism
GEO Series GSE122031. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Carboxypeptidase M modulates BMSCs osteogenesis-adipogenesis via the MAPK/ERK pathway: An integrated single-cell and bulk transcriptomic study
GEO Series GSE249471. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics analysis of the repair process of ligament breaks
GEO Series GSE199280. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome analysis of low-dose radiotherapy-mediated alleviation of LPS-induced acute lung injury
GEO Series GSE292681. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome analysis reveals the association between ketone body synthesis and morphogenic profile of intestinal epithelia in neonatal mice II
GEO Series GSE311168. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing; Other.
Dataset related to article"Integrating single-cell and spatial transcriptomics to elucidate the crosstalk between cancer-associated fibroblasts and cancer cells in hepatocellular carcinoma with spleen-deficiency syndrome"
<p>Most patients with hepatocellular carcinoma (HCC) in China have been diagnosed with spleen deficiency syndrome (SDS), which accelerates the progression of HCC by disrupting the tumor microenvironment (TME) homeostasis. However, the underlying mechanism remains to be explored. By integrating single-cell and spatial transcriptomics, we found that the crosstalk between CAFs and cancer cells is crucial for the tumor-promoting effect of SDS. CAFs recruited by HCC via PDGFA may lead to ECM remodeling through activation of the TGF-β pathway, thereby forming a physical barrier to block immune cell infiltration under SDS. </p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.