Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
11,105
datasets available to search
ShareScore release 0.9.0
Dataset results
11,105 results for “single cells”
Tracing pluripotency of human early embryos and embryonic stem cells by single cell RNA-seq
GEO Series GSE36552. Homo sapiens. 124 samples. Type: Expression profiling by high throughput sequencing.
DNA Analysis by Restriction Enzyme (DARE) enables concurrent genomic and epigenomic characterization of single cells
GEO Series GSE128560. Homo sapiens. 29 samples. Type: Methylation profiling by high throughput sequencing.
Single-cell transcriptomic analysis reveals the landscapes of key metabolic tissues in lactating dairy cows
GEO Series GSE176512. Bos taurus. 9 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA sequencing reveals markers of disease progression in primary cutaneous T-cell lymphoma
GEO Series GSE173205. Homo sapiens. 27 samples. Type: Expression profiling by high throughput sequencing.
Respecifying human iPSC-derived blood cells into highly engraftable hematopoietic stem and progenitor cells with a single factor
GEO Series GSE103420. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
single-cell chromatin accessibility profiling of mouse gonads during sex determination [scATAC-seq]
GEO Series GSE218995. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Spatio-temporal landscape of mouse epididymal cells and specific mitochondria-rich segments defined by large-scale single-cell RNA-seq
GEO Series GSE159713. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Deep phenotyping by mass cytometry and single cell RNA-sequencing reveals LYN regulated signaling profiles underlying monocyte subset heterogeneity and lifespan
GEO Series GSE146216. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Gene expression profile at single cell level from mitral valves of wild-type and Fbn1 C1039G/+ mice at 1 month-of-age
GEO Series GSE261874. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Identification of a Novel, MSC-Induced Macrophage Subtype via Single-Cell Sequencing: Implications for Intervertebral Disc Degeneration Therapy
GEO Series GSE246842. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA sequencing of Zfp36l2 knock-out and floxed GV mouse oocytes.
GEO Series GSE96638. Mus musculus. 50 samples. Type: Expression profiling by high throughput sequencing.
Effect of methanol fixation on single cell RNA sequencing of the murine dentate gyrus (droplet-based scRNAseq).
GEO Series GSE241452. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Targeted single-cell RNAseq of tonsil organoid cultures
GEO Series GSE158459. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Zebrafish whole brain single cell RNA-seq of nr1d1:VNP fish
GEO Series GSE134288. Danio rerio. 1 samples. Type: Expression profiling by high throughput sequencing.
Single Cell sequencing analysis of adult AT1 Yap/Taz KO and wild-type lung epithelium
GEO Series GSE164422. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-Cell Transcriptome Analysis Reveals Estrogen Signaling Coordinately Augments One-Carbon, Polyamine, and Purine Synthesis in Breast Cancer [II]
GEO Series GSE119455. Homo sapiens. 39 samples. Type: Expression profiling by high throughput sequencing.
Single-cell profiles of retinal neurons differing in resilience to injury reveal neuroprotective genes - Adult control RGCs treated with Actinomycin
GEO Series GSE137828. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Massively-parallel Microbial mRNA Sequencing (M3-Seq) reveals heterogenous behaviors in bacteria at single-cell resolution
GEO Series GSE231935. Escherichia coli; Pseudomonas aeruginosa; Bacillus subtilis. 4 samples. Type: Expression profiling by high throughput sequencing.
Characterizing cellular heterogeneity and homeostatic gene regulatory networks in the adult mammalian stria vascularis using single cell and single nucleus transcriptional profiling
GEO Series GSE136196. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-sequencing data and functional analysis revealed that ACC1, a rate limiting enzyme of fatty acid biosynthesis, is responsible for survival of thymic iNKT cells.
GEO Series GSE248939. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.