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1,353
datasets available to search
ShareScore release 0.9.0
Dataset results
1,353 results for “single-cell transcriptomics”
Single-cell transcriptomic profile of CD45+ cells in atherosclerotic plaques of mice with myeloid-specific Lipa overexpression and on Ldlr-/- background [scRNA-seq]
GEO Series GSE243119. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome analysis revealed cellular reprogramming following Tetramethylpyrazine treatment in LPS-induced acute lung injury
GEO Series GSE276682. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics of precursor lung adenocarcinoma reveals intratumoral heterogeneity and shifting immune network
GEO Series GSE164789. Homo sapiens. 78 samples. Type: Expression profiling by high throughput sequencing.
spaTransfer: transfer learning for single-cell and spatial transcriptomics data using non-negative matrix factorization [DG]
GEO Series GSE317381. Homo sapiens. 4 samples. Type: Other.
Single-Cell Transcriptome Atlas of Human Mesenchymal Stem Cells
GEO Series GSE182158. Homo sapiens. 11 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics reveals distinct molecular alterations of human renal cell carcinoma-derived endothelial cells that are stable in ex vivo primary culture [RNA-Seq]
GEO Series GSE237427. Homo sapiens. 11 samples. Type: Expression profiling by high throughput sequencing.
Detailed Survey of an in-vitro Intestinal Epithelium Model by Single-Cell Transcriptomics
GEO Series GSE233628. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
High-throughput single-cell transcriptome profiling of tomato leaf
GEO Series GSE201931. Solanum lycopersicum. 4 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic atlas of cystic echinococcosis reveals diversity roles of small extracellular vesicles derived from Echinococcus granulosus during liver infection
GEO Series GSE247521. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA sequencing and spatial transcriptomics reveal the osteoimmune microenvironment of biomaterial-mediated bone regeneration [scRNA-seq]
GEO Series GSE246475. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Cell atlas of trabecular meshwork in glaucomatous non-human primates and DEGs related to tissue contraction based on single-cell transcriptomics
GEO Series GSE231749. Macaca mulatta. 2 samples. Type: Expression profiling by high throughput sequencing.
Spatial and Single-cell Transcriptomic Characterization of WIF1-induced Normal-tension Glaucoma [Single Cell Multiome ATAC + Gene Expression]
GEO Series GSE293381. Mus musculus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Heterogeneity of Active Mast Cells, Endothelial Cells, and Fibroblasts: Unique Transcriptomic Features of Synovial Single-Cell Sequencing in Hemophilic Arthritis
GEO Series GSE284391. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic and m6A methylation analysis reveals platelet-mediated immune regulatory mechanisms in sepsis
GEO Series GSE294745. Homo sapiens. 6 samples. Type: Other.
Dissecting gonadal cell lineage specification and sex determination during human development using a single-cell transcriptomics approach
GEO Series GSE161421. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic analysis of day 100 multilineage and gut organoids
GEO Series GSE153075. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomes of macaque seminiferous tubule under different conditions
GEO Series GSE237452. Macaca mulatta. 12 samples. Type: Expression profiling by high throughput sequencing.
Single-cell Transcriptomics Dissects Premalignant Progression in Proliferative Verrucous Leukoplakia
GEO Series GSE196296. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomics reveals ferrimagnetic vortex nanoring-mediated mild magnetic hyperthermia exerts antitumor effects by alleviating tumor-associated macrophages suppression
GEO Series GSE241188. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Next generation sequencing analysis of the single-cell transcriptomes of the T cell eclited by fecal phageome
GEO Series GSE269903. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.