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Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
11,105
datasets available to search
ShareScore release 0.9.0
Dataset results
11,105 results for “single cells”
Chromatin accessibility profile at single nuclei level of cells from mouse hippocampus
GEO Series GSE237884. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Mapping genotypes to chromatin accessibility profiles in single cells [Genotyping GoT-ChA amplicon]
GEO Series GSE204911. Homo sapiens. 27 samples. Type: Other.
Single-cell transcriptomic map of the human and mouse bladders
GEO Series GSE129845. Homo sapiens; Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA sequencing of BCSCs from MCF7 cell lines
GEO Series GSE124887. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptomic profiling of aortic plaque cells from myeloid-specific Lipa overexpression and control mice on an Ldlr-/- background
GEO Series GSE285960. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq of human kidney organoids
GEO Series GSE181002. Homo sapiens. 8 samples. Type: Expression profiling by high throughput sequencing.
Single-cell analysis of the epigenome and 3D chromatin architecture in the human retina [10x multiome]
GEO Series GSE277326. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Single-cell multidimensional profiling of tumor cell heterogeneity in supratentorial ependymomas
GEO Series GSE260452. Rattus norvegicus; Homo sapiens. 111 samples. Type: Expression profiling by high throughput sequencing; Other.
Epigenomic landscape of human cumulus cells in premature ovarian insufficiency using single-base resolution methylome and hydroxymethylome. [RNA-Seq]
GEO Series GSE267641. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Joint single-cell multiomic analysis identifies Aebp2 as a key regulator in Wnt3a induced asymmetric stem cell division
GEO Series GSE168637. Mus musculus. 134 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Longitudinal single-cell RNA-sequencing (scRNAseq) of broncho-alaveolar compartment of rhesus macaque model of COVID-19
GEO Series GSE190659. Macaca mulatta. 18 samples. Type: Expression profiling by high throughput sequencing.
Bisulfite-independent analysis of CpG island methylation enables genome-scale stratification of single cells
GEO Series GSE75346. Homo sapiens. 65 samples. Type: Methylation profiling by high throughput sequencing.
Gene expression profile at single cell level of HeLa cells treated with the CDC7-specific inhibitor TAK-931 [scRNA-seq]
GEO Series GSE244987. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
The impact of conditional Opa1 Knockout on gene expression profile at single cell level during adult neurogenesis in the hippocampus
GEO Series GSE233461. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.
Organogenetic transcriptomes of the Drosophila embryo at single cell resolution
GEO Series GSE234602. Drosophila melanogaster. 4 samples. Type: Expression profiling by high throughput sequencing.
Single cell RNA-seq of mouse brain astrocyte transcriptomes
GEO Series GSE99058. Mus musculus. 250 samples. Type: Expression profiling by high throughput sequencing.
Single cell atlas for mammals, reptiles and birds
GEO Series GSE183300. Columba livia; Felis catus; Anas platyrhynchos; Canis lupus familiaris; Anolis carolinensis; Panthera tigris altaica; Capra aegagrus; Manis javanica; Cervus nippon taiouanus; Oryctolagus cuniculus; Mesocricetus auratus. 29 samples. Type: Expression profiling by high throughput sequencing.
Epigenetic priming induces cancer testis antigens and human endogenous retroviruses in glioma for enhanced T cell responses at single cell resolution (bulk RNA-Seq)
GEO Series GSE261187. Homo sapiens. 20 samples. Type: Expression profiling by high throughput sequencing.
SINGLE-CELL CHARACTERIZATION OF A MODEL OF POLY I:C-STIMULATED PERIPHERAL BLOOD MONONUCLEAR CELLS IN SEVERE ASTHMA
GEO Series GSE172495. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
Deciphering cell states and genealogies of human hematopoiesis with single-cell multi-omics
GEO Series GSE219015. Mus musculus; Homo sapiens. 56 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.