Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
2,327
datasets available to search
ShareScore release 0.9.0
Dataset results
2,327 results for “Placement”
Fig 5 in Phylogenetic placement of Carrhotus Thorell, 1891 with three new species from Sri Lanka (Araneae: Salticidae)
Fig 5. Photographs of live Carrhotus atratus sp. nov. A–B, E–F, I. Males. C–D, G–H. Females. A–H from Mandaitivu, I from Hiyare.
Data from: Whole chloroplast genome and gene locus phylogenies reveal the taxonomic placement and relationship of Tripidium (Panicoideae: Andropogoneae) to sugarcane
Background: For over 50 years, attempts have been made to introgress agronomically useful traits from Erianthus sect. Ripidium (Tripidium) species into sugarcane based on both genera being part of the 'Saccharum Complex', an interbreeding group of species believed to be involved in the origins of sugarcane. However, recent low copy number gene studies indicate that Tripidium and Saccharum are more divergent than previously thought. The extent of genus Tripidium has not been fully explored and many species that should be included in Tripidium are still classified as Saccharum. Moreover, Tripidium is currently defined as incertae sedis within the Andropogoneae, though it has been suggested that members of this genus are related to the Germainiinae. Results: Eight newly-sequenced chloroplasts from potential Tripidium species were combined in a phylogenetic study with 46 members of the Panicoideae, including seven Saccharum accessions, two Miscanthidium and three Miscanthus species. A robust chloroplast phylogeny was generated and comparison with a gene locus phylogeny clearly places a monophyletic Tripidium clade outside the bounds of the Saccharinae. A key to the currently identified Tripidium species is presented. Conclusion: For the first time, we have undertaken a large-scale whole plastid study of eight newly assembled Tripidium accessions and a gene locus study of five Tripidium accessions. Our findings show that Tripidium and Saccharum are eight million years divergent, last sharing a common ancestor 12 million years ago. We demonstrate that four species should be removed from Saccharum/Erianthus and included in genus Tripidium. In a genome context, we show that Tripidium evolved from a common ancestor with and extended Germainiinae clade formed from Germainia, Eriochrysis, Apocopis, Pogonatherum and Imperata. We re-define the 'Saccharum complex' to a group of genera that can interbreed in the wild and extend the Saccharinae to include Sarga along with Sorghastrum, Microstegium vimineum and Polytrias (but excluding Sorghum). Monophyly of genus Tripidium is confirmed and the genus is expanded to include Tripidium arundinaceum, Tripidium procerum, Tripidium kanashiroi and Tripidium rufipilum. As a consequence, these species are excluded from genus Saccharum. Moreover, we demonstrate that genus Tripidium is distinct from the Germainiinae.
Fig. 7. Cottus microstomus Heckel, 1837 in A new species of the genus Cottus (Scorpaeniformes, Cottidae) from the Baltic Sea Basin and its phylogenetic placement
Fig. 7. Cottus microstomus Heckel, 1837 (ZIN 56723), SL 78.4 mm, Siesartis River, Neman/Nemunas River basin (Lithuania).
Fig. 6 in A new species of the genus Cottus (Scorpaeniformes, Cottidae) from the Baltic Sea Basin and its phylogenetic placement
Fig. 6. Bayesian phylogenetic tree of the freshwater species of Cottidae reconstructed using mtDNA control region sequences. Bayesian posterior probabilities (on the top side) and bootstrap values from a ML analysis (on the down side) are shown. Results of species delimitation with bPTP support values are presented.
FIGURE 3 in DNA barcode data confirm the placement of subterranean Noemacheilus (Troglocobitis) starostini Parin 1983 in the genus Paracobitis (Teleostei, Nemacheilidae)
FIGURE 3. Entrance to the Suvlyoyuk sinkhole, Turkmenistan.
Figure 4 from: Lamb T, Marais E, Bond JE (2017) A second locality for the Namib darkling beetle Onymacris brainei (Tenebrionidae, Coleoptera) and first report on its molecular phylogenetic placement. ZooKeys 687: 63-72. https://doi.org/10.3897/zookeys.687.13660
Figure 4 - ML consensus topology of Onymacris, with bootstrap support indicated by black (> 95%), gray (> 90%), and white (> 70%) nodes. Inset at lower left is a ML tree showing branch lengths.
Figure 3 from: Lamb T, Marais E, Bond JE (2017) A second locality for the Namib darkling beetle Onymacris brainei (Tenebrionidae, Coleoptera) and first report on its molecular phylogenetic placement. ZooKeys 687: 63-72. https://doi.org/10.3897/zookeys.687.13660
Figure 3 - Specimens of Onymacris brainei from the second locality, illustrating variation in degree of elytral striping.
Figure 1 from: Lamb T, Marais E, Bond JE (2017) A second locality for the Namib darkling beetle Onymacris brainei (Tenebrionidae, Coleoptera) and first report on its molecular phylogenetic placement. ZooKeys 687: 63-72. https://doi.org/10.3897/zookeys.687.13660
Figure 1 - Color variation among members of the 'white' Onymacris clade, as represented by: (top row, left to right) Onymacris bicolor, O. marginipennis, O. candidipennis, and (bottom row, left to right) O. langi visseri, O. langi cornelii, and O. langi meridionalis.
Figure 2 from: Lamb T, Marais E, Bond JE (2017) A second locality for the Namib darkling beetle Onymacris brainei (Tenebrionidae, Coleoptera) and first report on its molecular phylogenetic placement. ZooKeys 687: 63-72. https://doi.org/10.3897/zookeys.687.13660
Figure 2 - Map illustrating the type locality for Onymacris brainei (star), surveyed sites with appropriate habitat (white circles), and the second locality for O. brainei (red circle).
Supplementary material 3 from: Kanda K, Gomez AR, Van Driesche R, Miller KB, Maddison DR (2016) Phylogenetic placement of the Pacific Northwest subterranean endemic diving beetle Stygoporus oregonensis Larson & LaBonte (Dytiscidae, Hydroporinae). ZooKeys 632: 75-91. https://doi.org/10.3897/zookeys.632.9866
Table 1 : Explanation note: Collection and specimen data for material examined in this study.
Supplementary material 4 from: Kanda K, Gomez AR, Van Driesche R, Miller KB, Maddison DR (2016) Phylogenetic placement of the Pacific Northwest subterranean endemic diving beetle Stygoporus oregonensis Larson & LaBonte (Dytiscidae, Hydroporinae). ZooKeys 632: 75-91. https://doi.org/10.3897/zookeys.632.9866
Table 2 : Explanation note: PCR primers and amplification conditions for sampled gene fragments.
Figure 3 from: Junfeng Z (2017) New findings of Flagellisargus J Zhang, 2012 (Diptera, Brachycera, Archisargidae), with discussion of the placements of some controversial taxa. Deutsche Entomologische Zeitschrift 64(2): 111-122. https://doi.org/10.3897/dez.64.13550
Figure 3 - Difference and similarity between four sets of wings, line drawings of holotypes, A Flagellisargus (Flagellisargus) sinicus J Zhang, 2012a, B Flagellisargus (Flagellisargus) venustus J Zhang, 2012a, C Flagellisargus (Flagellisargus) robustus J Zhang, 2012a, D Flagellisargus (Changbingisargus) parvus subgen. et sp. n. Scale bas 1 mm.
Figure 5 from: Junfeng Z (2017) New findings of Flagellisargus J Zhang, 2012 (Diptera, Brachycera, Archisargidae), with discussion of the placements of some controversial taxa. Deutsche Entomologische Zeitschrift 64(2): 111-122. https://doi.org/10.3897/dez.64.13550
Figure 5 - Archirhagio mostovskii J Zhang, 2015 and Archirhagio zhangi K Zhang et al., 2009, photomicrographs of holotypes (males) A Archirhagio mostovskii J Zhang, 2015, B Archirhagio zhangi K Zhang et al., 2009 (after K Zhang et al., 2009, modified), C male terminalia (after K Zhang et al., 2009, modified). Scale bars 1mm.
Figure 4 from: Junfeng Z (2017) New findings of Flagellisargus J Zhang, 2012 (Diptera, Brachycera, Archisargidae), with discussion of the placements of some controversial taxa. Deutsche Entomologische Zeitschrift 64(2): 111-122. https://doi.org/10.3897/dez.64.13550
Figure 4 - Flagellisargus (Flagellisargus) cf. sinicus J Zhang, 2012a, photomicrographs, NIGP L201702, A habitus (dorsal view), B antennae, C tibial spur of hindleg. Scale bar 1 mm (A), 0.1 mm (B, C).
Figure 1 from: Junfeng Z (2017) New findings of Flagellisargus J Zhang, 2012 (Diptera, Brachycera, Archisargidae), with discussion of the placements of some controversial taxa. Deutsche Entomologische Zeitschrift 64(2): 111-122. https://doi.org/10.3897/dez.64.13550
Figure 1 - Flagellisargus (Changbingisargus) parvus subgen. et sp. n., photomicrographs, holotype NIGP DHG01701, A habitus (dorsal view), B antenna, C male genitalia, D enlarged flagellum. Scale bar 1 mm (A), 0.1 mm (B, C, D).
Figure 2 from: Junfeng Z (2017) New findings of Flagellisargus J Zhang, 2012 (Diptera, Brachycera, Archisargidae), with discussion of the placements of some controversial taxa. Deutsche Entomologische Zeitschrift 64(2): 111-122. https://doi.org/10.3897/dez.64.13550
Figure 2 - Flagellisargus (Changbingisargus) parvus subgen. et sp. n. line drawings of holotype NIGP DHG01701, A habitus (dorsal view), B antenna, C male genitalia. Scale bar 1 mm (A) 0.1 mm, (B, C).
Figure 3 from: Wood KR, Appelhans MS, Wagner WL (2017) Melicope stonei, section Pelea (Rutaceae), a new species from Kaua'i, Hawaiian Islands: with notes on its distribution, ecology, conservation status, and phylogenetic placement. PhytoKeys 83: 119-132. https://doi.org/10.3897/phytokeys.83.13442
Figure 3 - Map of Kaua'i, Hawaiian Islands, with polygon indicating distribution of Melicope stonei in the Kōke'e forests.
Figure 4 from: Wood KR, Appelhans MS, Wagner WL (2017) Melicope stonei, section Pelea (Rutaceae), a new species from Kaua'i, Hawaiian Islands: with notes on its distribution, ecology, conservation status, and phylogenetic placement. PhytoKeys 83: 119-132. https://doi.org/10.3897/phytokeys.83.13442
Figure 4 - Phylogenetic placement of Melicope stonei K.R. Wood, Appelhans & W.L. Wagner based on four nuclear and two plastid markers (modified from Appelhans et al. 2014c). The phylogenetic tree only shows the Hawaiian radiation of Melicope. The terms Apocarpa, Cubicarpa, Megacarpa and Pelea refer to the former Hawaiian sections of Melicope/Pelea (Hartley & Stone 1989). The support values are displayed above the branches and the first value represents the Bayesian posterior probability values (pp), followed by the bootstrap values (bs) from the Maximum Likelihood analysis.
Figure 2 from: Wood KR, Appelhans MS, Wagner WL (2017) Melicope stonei, section Pelea (Rutaceae), a new species from Kaua'i, Hawaiian Islands: with notes on its distribution, ecology, conservation status, and phylogenetic placement. PhytoKeys 83: 119-132. https://doi.org/10.3897/phytokeys.83.13442
Figure 2 - Melicope stonei K.R. Wood, Appelhans & W.L. Wagner. A Male flower, lateral view with sepals and petals cut away to show antisepalous and antipetalous stamens B Male flower, top view C Female flower, lateral view with sepals and petals cut away to show staminodes and pistil D Female flower, top view E–F abaxial leaf surface along midvein of M. stonei showing variability of leaf vestiture G Melicope barbigera A. Gray abaxial leaf surface along midvein A–D from Wood 15101 (PTBG) E from Wagner & Wood 6891 (US) F from Wood 8432 (US) G from Wagner & Wood 6896 (US) (Illustration by Alice Tangerini).
Figure 1 from: Wood KR, Appelhans MS, Wagner WL (2017) Melicope stonei, section Pelea (Rutaceae), a new species from Kaua'i, Hawaiian Islands: with notes on its distribution, ecology, conservation status, and phylogenetic placement. PhytoKeys 83: 119-132. https://doi.org/10.3897/phytokeys.83.13442
Figure 1 - Melicope stonei K.R. Wood, Appelhans & W.L. Wagner. A Flowering branch B Adaxial leaf surface near margin toward apex C Abaxial leaf surface near margin toward apex D Ramiflorous inflorescence arising below leaves on stem E Female flower, lateral view F Immature fruit and flowers G Dehisced fruit, showing seeds. A-C from Wagner & Wood 6891 (US) D from Wood 8431 (US) E from Wood 15101 (PTBG) F from Wood & Lee 16729 (photo) G from Lorence et al. 6454 (photo) (Illustration by Alice Tangerini).
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.