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Supplementary material 5 from: Reid BN, Servis JA, Timmers M, Rohwer F, Naro-Maciel E (2022) 18S rDNA amplicon sequence data (V1–V3) of the Palmyra Atoll National Wildlife Refuge, Central Pacific. Metabarcoding and Metagenomics 6: e78762. https://doi.org/10.3897/mbmg.6.78762
Table S3
Supplementary material 6 from: Reid BN, Servis JA, Timmers M, Rohwer F, Naro-Maciel E (2022) 18S rDNA amplicon sequence data (V1–V3) of the Palmyra Atoll National Wildlife Refuge, Central Pacific. Metabarcoding and Metagenomics 6: e78762. https://doi.org/10.3897/mbmg.6.78762
Table S4
Supplementary material 1 from: Reid BN, Servis JA, Timmers M, Rohwer F, Naro-Maciel E (2022) 18S rDNA amplicon sequence data (V1–V3) of the Palmyra Atoll National Wildlife Refuge, Central Pacific. Metabarcoding and Metagenomics 6: e78762. https://doi.org/10.3897/mbmg.6.78762
Figure S1
Supplementary material 4 from: Reid BN, Servis JA, Timmers M, Rohwer F, Naro-Maciel E (2022) 18S rDNA amplicon sequence data (V1–V3) of the Palmyra Atoll National Wildlife Refuge, Central Pacific. Metabarcoding and Metagenomics 6: e78762. https://doi.org/10.3897/mbmg.6.78762
Table S2
Supplementary material 3 from: Reid BN, Servis JA, Timmers M, Rohwer F, Naro-Maciel E (2022) 18S rDNA amplicon sequence data (V1–V3) of the Palmyra Atoll National Wildlife Refuge, Central Pacific. Metabarcoding and Metagenomics 6: e78762. https://doi.org/10.3897/mbmg.6.78762
Table S1
Supplementary Data for Manuscript "Examining the mid to long-term variability in saturated hydraulic conductivity of sandy soils and its influencing factors under constant head test in the laboratory"
Open the record for dataset details and reuse information.
Supplementary material 8 from: Vanegas-Ríos JA, Serra Alanís WS, Azpelicueta MM, Litz T, Malabarba LR (2024) Population variation of Diapoma pampeana (Characiformes, Characidae, Stevardiinae) from an isolated coastal drainage in Uruguay, with new records: comparing morphological and molecular data. Zoosystematics and Evolution 100(1): 69-85. https://doi.org/10.3897/zse.100.112778
Table of coordinates used
Supplementary material 7 from: Vanegas-Ríos JA, Serra Alanís WS, Azpelicueta MM, Litz T, Malabarba LR (2024) Population variation of Diapoma pampeana (Characiformes, Characidae, Stevardiinae) from an isolated coastal drainage in Uruguay, with new records: comparing morphological and molecular data. Zoosystematics and Evolution 100(1): 69-85. https://doi.org/10.3897/zse.100.112778
Haplotype network of the COI data analyzed of D. pampeana
Supplementary material 2 from: Vanegas-Ríos JA, Serra Alanís WS, Azpelicueta MM, Litz T, Malabarba LR (2024) Population variation of Diapoma pampeana (Characiformes, Characidae, Stevardiinae) from an isolated coastal drainage in Uruguay, with new records: comparing morphological and molecular data. Zoosystematics and Evolution 100(1): 69-85. https://doi.org/10.3897/zse.100.112778
Scree plots obtained from the morphometric and meristic data analyzed
Supplementary material 5 from: Vanegas-Ríos JA, Serra Alanís WS, Azpelicueta MM, Litz T, Malabarba LR (2024) Population variation of Diapoma pampeana (Characiformes, Characidae, Stevardiinae) from an isolated coastal drainage in Uruguay, with new records: comparing morphological and molecular data. Zoosystematics and Evolution 100(1): 69-85. https://doi.org/10.3897/zse.100.112778
Tukey box plot of most distinctive meristic data observed in analyzed specimens of Diapoma pampeana
Supplementary material 6 from: Vanegas-Ríos JA, Serra Alanís WS, Azpelicueta MM, Litz T, Malabarba LR (2024) Population variation of Diapoma pampeana (Characiformes, Characidae, Stevardiinae) from an isolated coastal drainage in Uruguay, with new records: comparing morphological and molecular data. Zoosystematics and Evolution 100(1): 69-85. https://doi.org/10.3897/zse.100.112778
Uncorrected pairwise genetic distances using the COI data matrix
Supplementary material 3 from: Vanegas-Ríos JA, Serra Alanís WS, Azpelicueta MM, Litz T, Malabarba LR (2024) Population variation of Diapoma pampeana (Characiformes, Characidae, Stevardiinae) from an isolated coastal drainage in Uruguay, with new records: comparing morphological and molecular data. Zoosystematics and Evolution 100(1): 69-85. https://doi.org/10.3897/zse.100.112778
Total variance accounted for the PCA performed for the morphometric and meristic data
Supplementary material 1 from: Vanegas-Ríos JA, Serra Alanís WS, Azpelicueta MM, Litz T, Malabarba LR (2024) Population variation of Diapoma pampeana (Characiformes, Characidae, Stevardiinae) from an isolated coastal drainage in Uruguay, with new records: comparing morphological and molecular data. Zoosystematics and Evolution 100(1): 69-85. https://doi.org/10.3897/zse.100.112778
All COI sequences analyzed in the present work
Supplementary material 2 from: Xiudan W, Luan L, Yang Z (2024) Discovery of a new species of Synergus (Hymenoptera, Cynipidae, Synergini) based on morphology and molecular data. ZooKeys 1193: 81-94. https://doi.org/10.3897/zookeys.1193.105756
appendix S2
Supplementary material 1 from: Xiudan W, Luan L, Yang Z (2024) Discovery of a new species of Synergus (Hymenoptera, Cynipidae, Synergini) based on morphology and molecular data. ZooKeys 1193: 81-94. https://doi.org/10.3897/zookeys.1193.105756
appendix S1
Supplementary data to "Infraspecific variation in Silene seed tubercles"
<p>Supplementary data to the article "Infraspecific variation in Silene seed tubercles"</p>
NeuralMie (v1.0) supplementary data
<p>Supplementary data for "NeuralMie (v1.0): an aerosol optics emulator." The preprint of the corresponding manuscript can be found here: <a href="https://gmd.copernicus.org/preprints/gmd-2024-30/">https://gmd.copernicus.org/preprints/gmd-2024-30/</a>, and the Github repository is located here: <a href="https://github.com/pnnl/NEURALMIE">https://github.com/pnnl/NEURALMIE</a>. This Zenodo repository contains training data and trained neural networks. Training data can also be generated using the code in the Github repository.</p> <p> </p> <p>The training data is contained in four files:</p> <p>inputs.npy - The inputs. Both the 'sphere' and 'coreshell' neural networks use the same input file. The sphere network ignores the last three columns of inputs. Please refer to the Github repository for details on how to load and train on the data.</p> <p>sphere_targets.npy - The training targets for the neural network that simulates scattering by homogeneous spheres.</p> <p>coreshell_targets.npy - The training targets for the neural network that simulates scattering by coated spheres.</p> <p>upper_x.npy - The upper bound of the particle size parameter distributions in the training set (such that 99.5% of the distribution is below this threshold).</p> <p> </p> <p>Trained Keras neural networks are provided in these files. These are also available from the Github repository along with Fortran-Keras bridge .txt formatted versions of the neural networks:</p> <p>sphere.h5</p> <p>coreshell.h5</p> <p> </p> <p>hyperparameter_search_ models.zip - Contains the randomly generated neural networks that were part of the hyperparameter search process. These should not be used operationally.</p> <p> </p>
Source Data for "Atomic-Precision Control of Plasmon-Induced Single-Molecule Switching in a Metal-Semiconductor Nanojunction" and Supplementary Information
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Supplementary material 1 from: Borisenko A, Young R, Hanner R (2024) A lab-centric, workflow-based data management system for environmental DNA research. Research Ideas and Outcomes 10: e120483. https://doi.org/10.3897/rio.10.e120483
eDNA Laboratory Database Schema Outline
Supplementary material 1 from: Meng H, Wang Y, Qiao G-X, Chen J (2024) Mitochondrial genome data provide insights into the phylogenetic relationships within Triplophysa dalaica (Kessler, 1876) (Cypriniformes, Nemacheilidae). ZooKeys 1197: 43-55. https://doi.org/10.3897/zookeys.1197.116342
Supplementary data
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.