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zenodo36/100

Copernicus Global Land Service: Land Cover 100m: collection 3: epoch 2015: Globe

<p>Base epoch 2015 from the Collection 3 of annual, global 100m land cover maps.</p> <p>Other available epochs: <a href="https://doi.org/10.5281/zenodo.3518026">2016</a>&nbsp;&nbsp;<a href="https://doi.org/10.5281/zenodo.3518036">2017</a>&nbsp;&nbsp;<a href="https://doi.org/10.5281/zenodo.3518038">2018</a>&nbsp;&nbsp;<a href="https://doi.org/10.5281/zenodo.3939050">2019</a></p> <p>Produced by the global component of the Copernicus Land Service, derived from PROBA-V satellite observations and ancillary datasets.</p> <p>The maps include</p> <ul> <li>a main discrete classification with 23 classes&nbsp;aligned with UN-FAO&#39;s Land Cover Classification System,</li> <li>a set of versatile cover fractions: percentage (%) of ground cover for the 10 main classes</li> <li>a forest type layer</li> <li>quality layers on input data density</li> </ul> <p><a href="https://land.copernicus.eu/global/lcviewer">Click here to view the maps</a></p> <p><a href="https://land.copernicus.eu/global/lcviewer">More information about the land cover maps</a></p> <p><a href="https://doi.org/10.5281/zenodo.3606295">Product User Manual</a></p>

opencc-by-4.0Dec 2019View details →
dryad36/100

Conservation in post-industrial cities: how does vacant land management and landscape configuration influence urban bees?

<p>1. Rich pollinator assemblages are documented in some cities despite habitat fragmentation and degradation, suggesting that urban areas have potential as pollinator refuges. To inform urban bee conservation, we assessed local and landscape scale drivers of bee community composition and foraging within vacant lots of Cleveland, Ohio, USA. Cleveland is a shrinking city, a type of urban area that has an over-abundance of vacated greenspaces as a result of population loss and subsequent demolition of abandoned infrastructure. As such, Cleveland represents over 350 post-industrial cities worldwide, that are all promising locations for bee conservation.</p> <p>2. Across a network of 56 residential vacant lots (each ~30m x 12m), we established seven unique habitats, including seeded native prairies, to investigate how vegetation management and landscape context at a 1500m radius influenced urban bee communities. We assessed the distribution of several bee functional traits, diversity, and abundance with pan and malaise traps. Foraging frequency was determined with plant-pollinator interaction networks derived from vacuum collections of bees at flowers.</p> <p>3. We observed higher bee richness and increased abundance of smaller sized bees as the size of surrounding greenspace patches increased within a 1500m radius landscape buffer. Within habitats, greater plant biomass positively influenced bee community richness and abundance whereas taller vegetation was a negative influence. Plant-pollinator interaction networks were dominated by spontaneous non-native vegetation, illustrating that this forage supports urban bees.</p> <p>4. Synthesis and applications: Our study indicates that proximity to larger greenspaces within an urban landscape promotes overall bee richness and increased occurrence of smaller bee species within residential vacant lots. While we did not observe our seeded native plants enhancing the bee community, native wildflowers were still establishing during the study and may have a greater influence when blooming at higher densities. Importantly, spontaneous non-native vegetation provided the majority of urban bee's forage. Thus, vacant land that is minimally managed and vegetated with what many consider undesirable "weeds", provides valuable habitat for bee conservation in cities.</p>

opencc-zeroSep 2020View details →
zenodo36/100

Parameterizing Subgrid Variations of Land Surface Heat Fluxes to the Atmosphere Improves Land Precipitation Simulation with the NCAR CESM1.2

<p>The dataset is the output of CESM that is used in the paper &quot;Parameterizing Subgrid Variations of Land Surface Heat Fluxes to the Atmosphere Improves Land Precipitation Simulation with the NCAR CESM1.2&quot; submitted to&nbsp;<em>Geophysical Research Letters</em>.</p>

opencc-by-4.0Sep 2020View details →
zenodo36/100

Thermophysical properties and surface heterogeneity of landing sites on Mars from overlapping THEMIS observations-Data

<p>Files, scripts/functions, observed temperature data, and modeled results used in the Ahern et al. paper entitled: Thermophysical properties and surface heterogeneity of landing sites on Mars from overlapping THEMIS observations.</p>

opencc-by-4.0Sep 2020View details →
zenodo36/100

Land Use and Land Cover Change 2000-2016 in Mozambique

<p>This&nbsp;repository includes land use and land cover maps of Mozambique for 2000, 2005, 2010 and 2016 years.</p> <p>The methodology is based on remote sensing methodology and include satellite image collection and compositing (annual cloud-free and shadow free Landsat images for 2000, 2005, 2010 and 2016),&nbsp; delineation of a large collection of training plots based on National Land Cover Classification system level 1, supervised classification using a machine learning algorithm (Random Forest) and post-processing steps.</p> <p>The LULCC map for 2016&nbsp; show area statistics of 45.0% (35.8 Mha) of dry forest, 37.0% (29.3 Mha) of grassland and fallow, 13.7% (10.8 Mha) of cropland 2.0% (1.6 Mha) of wetlands, 1.3% (1 Mha) of other categories (rocks, sands, or bare soils), 0.3% (271,000 ha) of Mangroves, and 0.1% (673.1 ha) of urban areas. The deforestation over the 2000-2016 period is estimated to have been 207,272 ha per year.</p> <p>The methodology and statistics are presented in the report included in this repository. Theses maps are outputs from the study &quot;An Analysis of Land Use Changes and Land Degradation in Mozambique&quot; conducted by Nitidae and CIRAD in the LAUREL project.</p> <p>&nbsp;</p>

opencc-by-4.0Nov 2020View details →
zenodo36/100

Land Use and Land Cover 2019 of Ribaue Mountains (Mount Ribaue and Mount M'paluwe) in Mozambique

<p>This&nbsp;repository includes the land use and land cover map of the Ribaue Mountains and surroundings (Ribaue district, Nampula province, Mozambique), using remote sensing.</p> <p>The Ribaue massif is a series of granite inselbergs in northern Mozambique near the town of Ribaue in Nampula Province. The main area of the massif is made up of the Serra de Ribaue to the west and the Serra de M&#39;paluwe to the east. The inselbergs rise from a relatively flat landscape at ca 500-600 m altitude up to 1675 m on Monte M&#39;paluwe. They form part of a belt of granite rock outcrops, inselbergs and mountains, running NE-SW across Nampula and Zambezia provinces and including Mt Inago (1804 m) and Mt Namuli (2419 m) to the southwest of the Ribaue massif.</p> <p>This belt is considered as a center of endemism. Overall the site supports 15 nationally endemic plant taxa (plants that only occur in Mozambique), 11 near-endemics (plants that are restricted to Mozambique and neighbouring countries) and 10 taxa that are threatened with extinction on the Global IUCN Red List. Steeply sloping granite rock outcrops, mid-altitude moist forest and miombo woodland are the dominant habitat types at the Ribaue massif. The site also includes smaller areas of gallery forest, marsh, seasonal stream gullies, seepage on granite rock, and shaded granite cliffs.</p> <p>The methodology used in this study is based on a classical approach of remote sensing: satellite image collection (cloud-free and shadow free Sentinel 2, 10 m resolution, two season), identification of land use typology (based on field campains), delineation of training plots, supervised classification of land use using a machine learning algorithm (Random Forest) and finally, calculation of land occupation statistics.</p> <p>The methodology and statistics are presented in the report included in the repository.</p>

opencc-by-4.0Oct 2020View details →
zenodo36/100

30 Years of Land Cover and Fraction Cover Changes over the Sudano-Sahel using Landsat Timeseries

<p>30m resolution historically consistent land cover and cover fraction maps over the Sudano-Sahel for the period 1986-2015. These land cover / cover fraction maps are achieved based on the Landsat archive preprocessed on Google Earth Engine and a random forest classification / regression model, while&nbsp;historical consistency is achieved using the Hidden Markov Model.</p> <p>Validated land cover / cover fraction maps covering the full Sudano-Sahel are&nbsp;provided for 2015 (2015_Sahel.zip), while historical maps are available for four focus areas. The extent of the areas are displayed in 11_study_area.jpeg</p> <p>Each of the zip files contains 14 GeoTIFF files for the respective period and area:</p> <ul> <li>Landsat_LC30_epochYYYY_AREA_bare-coverfraction-layer.tif [0-100%]</li> <li>Landsat_LC30_epochYYYY_AREA_crops-coverfraction-layer.tif [0-100%]</li> <li>Landsat_LC30_epochYYYY_AREA_DataDensityIndicator.tif [# overpasses that are used as input for the creation of the maps for this region / epoch]</li> <li>Landsat_LC30_epochYYYY_AREA_discrete-classification-HMM.tif [temporally cleaned discrete classification map using the Hidden Markov Model; legend see below]&nbsp;</li> <li>Landsat_LC30_epochYYYY_AREA_discrete-classification.tif [original discrete classification map; legend see below]</li> <li>Landsat_LC30_epochYYYY_AREA_forest-type-layer.tif [legend see below]</li> <li>Landsat_LC30_epochYYYY_AREA_grass-coverfraction-layer.tif [0-100%]</li> <li>Landsat_LC30_epochYYYY_AREA_moss-coverfraction-layer.tif [0-100%]</li> <li>Landsat_LC30_epochYYYY_AREA_shrub-coverfraction-layer.tif [0-100%]</li> <li>Landsat_LC30_epochYYYY_AREA_snow-coverfraction-layer.tif [0-100%]</li> <li>Landsat_LC30_epochYYYY_AREA_tree-coverfraction-layer.tif [0-100%]</li> <li>Landsat_LC30_epochYYYY_AREA_urban-coverfraction-layer.tif [0-100%]</li> <li>Landsat_LC30_epochYYYY_AREA_water-permanent-coverfraction-layer.tif [0-100%]</li> <li>Landsat_LC30_epochYYYY_AREA_water-seasonal-coverfraction-layer.tif [0-100%]</li> </ul> <p>Discrete classification legend:</p> <ul> <li>0: Unknown. No or not enough satellite data available.</li> <li>20: Shrubs. Woody perennial plants with persistent and woody stems and without any defined main stem being less than 5 m tall. The shrub foliage can be either evergreen or deciduous.</li> <li>30: Herbaceous vegetation. Plants without persistent stem or shoots above ground and lacking definite firm structure. Tree and shrub cover is less than 10 %.</li> <li>40: Cultivated and managed vegetation / agriculture. Lands covered with temporary crops followed by harvest and a bare soil period (e.g., single and multiple cropping systems). Note that perennial woody crops will be classified as the appropriate forest or shrub land cover type.</li> <li>50: Urban / built up. Land covered by buildings and other man-made structures.</li> <li>60: Bare / sparse vegetation. Lands with exposed soil, sand, or rocks and never has more than 10 % vegetated cover during any time of the year.</li> <li>70: Snow and ice. Lands under snow or ice cover throughout the year.</li> <li>80: Permanent water bodies. Lakes, reservoirs, and rivers. Can be either fresh or salt-water bodies.</li> <li>90: Herbaceous wetland. Lands with a permanent mixture of water and herbaceous or woody vegetation. The vegetation can be present in either salt, brackish, or fresh water.</li> <li>100: Moss and lichen.</li> <li>111: Closed forest, evergreen needle leaf. Tree canopy &gt;70 %, almost all needle leaf trees remain green all year. Canopy is never without green foliage.</li> <li>112: Closed forest, evergreen broad leaf. Tree canopy &gt;70 %, almost all broadleaf trees remain green year round. Canopy is never without green foliage.</li> <li>113: Closed forest, deciduous needle leaf. Tree canopy &gt;70 %, consists of seasonal needle leaf tree communities with an annual cycle of leaf-on and leaf-off periods.</li> <li>114: Closed forest, deciduous broad leaf. Tree canopy &gt;70 %, consists of seasonal broadleaf tree communities with an annual cycle of leaf-on and leaf-off periods.</li> <li>115: Closed forest, mixed.</li> <li>116: Closed forest, not matching any of the other definitions.</li> <li>121: Open forest, evergreen needle leaf. Top layer- trees 15-70 % and second layer- mixed of shrubs and grassland, almost all needle leaf trees remain green all year. Canopy is never without green foliage.</li> <li>122:Open forest, evergreen broad leaf. Top layer- trees 15-70 % and second layer- mixed of shrubs and grassland, almost all broadleaf trees remain green year round. Canopy is never without green foliage.</li> <li>123: Open forest, deciduous needle leaf. Top layer- trees 15-70 % and second layer- mixed of shrubs and grassland, consists of seasonal needle leaf tree communities with an annual cycle of leaf-on and leaf-off periods.</li> <li>124: Open forest, deciduous broad leaf. Top layer- trees 15-70 % and second layer- mixed of shrubs and grassland, consists of seasonal broadleaf tree communities with an annual cycle of leaf-on and leaf-off periods.</li> <li>125: Open forest, mixed.</li> <li>126: Open forest, not matching any of the other definitions.</li> <li>200: Oceans, seas. Can be either fresh or salt-water bodies.</li> </ul> <p>Forest type legend:</p> <ul> <li>0: Unknown</li> <li>1: Evergreen needle leaf</li> <li>2: Evergreen broad leaf</li> <li>3: Deciduous needle leaf</li> <li>4: Deciduous broad leaf</li> <li>5: Mix of forest types</li> </ul> <p>More detail on the classification algorithm and the resulting maps can be found in the accompanying paper:&nbsp;</p> <p>Souverijns, N.; Buchhorn, M.; Horion, S.; Fensholt, R.; Verbeeck, H.; Verbesselt, J.; Herold, M.; Tsendbazar, N.-E.; Bernardino, P.N.; Somers, B.; Van De Kerchove, R. Thirty Years of Land Cover and Fraction Cover Changes over the Sudano-Sahel Using Landsat Time Series.&nbsp;<em>Remote Sens.</em>&nbsp;<strong>2020</strong>,&nbsp;<em>12</em>, 3817.&nbsp;https://doi.org/10.3390/rs12223817</p> <p>Please note that a quality layer is available for each of the historical areas / periods (Landsat_LC30_epochYYYY_AREA_DataDensityIndicator.tif). In case a value of 4 or lower is achieved here, the discrete land cover classification / cover fraction for this period / area is highly uncertain. Take this into account when analysing the maps. Furthermore, take note that there is a large difference between the temporally cleaned (Landsat_LC30_epochYYYY_AREA_discrete-classification-HMM.tif) and original discrete land cover classification (Landsat_LC30_epochYYYY_AREA_discrete-classification.tif). We recommend to use the temporally cleaned version in combination with the quality layer.</p>

opencc-by-4.0Dec 2019View details →
zenodo36/100

Historic land use intensity (tau) development

<p>tau_xref_history_country.mz contains historic tau values on iso country level for total tau factor. This numbers were calculated by taking FAO yields and norming it to the 1995 tau values of the paper (faoyields*tau95/mean(faoyields[1995:2005]))</p>

opencc-by-4.0May 2012View details →
zenodo36/100

Output data from: From land productivity trends to land degradation assessment in Mozambique: Effects of climate, human activities and stakeholder definitions

<p>This repository includes output data from the following article:</p> <p><strong>Montfort, F., B&eacute;gu&eacute;, A., Leroux, L., Blanc, L., Gond, V., Cambule, A.H., Remane, I.A.D., Grinand, C., 2020. From land productivity trends to land degradation assessment in Mozambique: Effects of climate, human activities and stakeholder definitions. <em>Land Degrad Dev</em>.; 32: 49&ndash; 65. <a href="https://doi.org/10.1002/ldr.3704">https://doi.org/10.1002/ldr.3704</a></strong></p> <p>This study aimed at characterizing and mapping the underlying factors (human or climatic) in land productivity changes over the 2000-2016 period, in order to assess land degradation in Mozambique.</p> <p>The methodology is based on remote sensing methodology. Land productivity change were first analyzed using MODIS NDVI time-series (2000&ndash;2016), and a two-step framework was then used to understand the main factors of these productivity changes, using climate times series (CHIRPS data for rainfall and CRU data for temperature), Land Use and Land Cover Change (LULCC) maps (Laurel project LULCC map), and ground knowledge.</p> <p>This repository includes raster data of annual land productivity change over the 2000-2016 period, annual land productivity climate factors, potential land productivity decrease factors and potential productivity increase factors. Data are available as GeoTIFF raster files at 250 m resolution in the UTM 37S projection (EPSG: 32737).</p>

opencc-by-4.0Jan 2021View details →
dryad36/100

The apparent exponential radiation of Phanerozoic land vertebrates is an artefact of spatial sampling biases

There is no consensus about how terrestrial biodiversity was assembled through deep time, and in particular whether it has risen exponentially over the Phanerozoic. Using a database of 38,711 fossil occurrences, we show that the spatial extent of the 'global' terrestrial tetrapod fossil record itself expands exponentially through the Phanerozoic, and that this spatial variation explains around 75% of the variation in known fossil species counts. Controlling for this bias, we find that regional-scale terrestrial tetrapod diversity was constrained over timespans of tens to hundreds of millions of years, and similar patterns are recovered for major subgroups, such as dinosaurs, mammals and squamates. The Cretaceous/Paleogene mass extinction, 66 million years ago, fundamentally disrupted terrestrial ecosystems, catalysing an abrupt increase in its aftermath. Nevertheless, this was followed by general stasis and recent diversity levels do not exceed those of the Paleogene. These findings parallel those recovered in analyses of local community-level richness, suggesting that tetrapod beta diversity has also not shown a general increase through time. Taken together, our findings strongly contradict past studies that suggested unbounded diversity increases over the last 100 million years.

opencc-zeroMar 2020View details →
dryad36/100

Data from: Sound settlement: noise surpasses land cover in explaining breeding habitat selection of secondary cavity-nesting birds

Birds breeding in heterogeneous landscapes select nest sites by cueing in on a variety of factors from landscape features and social information to the presence of natural enemies. We focus on determining the relative impact of anthropogenic noise on nest site occupancy, compared to amount of forest cover, which is known to strongly influence the selection process. We examine chronic, industrial noise from natural gas wells directly measured at the nest box as well as site-averaged noise, using a well-established field experimental system in northwestern New Mexico. We hypothesized that high levels of noise, both at the nest site and in the environment, would decrease nest box occupancy. We set up nest boxes using a geospatially paired control and experimental site design and analyzed four years of occupancy data from four secondary cavity-nesting birds common to the Colorado Plateau. We found different effects of noise and landscape features depending on species, with strong effects of noise observed in breeding habitat selection of Myiarchus cinerascens, the Ash-throated Flycatcher, and Sialia currucoides, the Mountain Bluebird. In contrast, the amount of forest cover less frequently explained habitat selection for those species or had a smaller standardized effect than the acoustic environment. Although forest cover characterization and management is commonly employed by natural resource managers, our results show that characterizing and managing the acoustic environment should be an important tool in protected area management.

opencc-zeroDec 2015View details →
dryad36/100

Data from: Anthropogenic land-use change intensifies the effect of low flows on stream fishes

1. As ecosystems experience simultaneous disturbances, it is critical to understand how multiple stressors interact to affect ecological change. Land-use change (LUC) and extreme flow events are two important stressors that could interact to affect fish populations. 2. We evaluated the individual and interactive effects of discharge and LUC associated with oil and natural gas development (ONGD) on populations of two stream fishes over a seven-year period. We used repeated-state (i.e., abundance trends) and rate (i.e., colonization and persistence) responses to advance our understanding of flow-ecology relationships in a multiple-stressor framework. 3. Overall, fish abundance, colonization, and persistence declined in association with discharge. The effect of LUC associated with ONGD differed between species, with the abundance of Mottled Sculpin declining and Mountain Sucker increasing. We found both synergistic and antagonistic interactions between discharge and LUC. LUC intensified the effect of low flows for one species and lead to greater variability in responses to flows for the other species. These differences between species' responses are likely due to differences in their physiological tolerances and behavioral adaptations to disturbance. 4. Synthesis and applications. Our research provides empirical evidence for the complex interactions that can arise between discharge and anthropogenic LUC. Management efforts (e.g., silt fences, vegetation replanting, and in-stream restoration) to mitigate the effects of anthropogenic alterations and promote high-quality refuge habitats could help mitigate the effect of hydrologic extremes. Further development of flow-ecology relationships in a multiple-stressor framework will help guide management of stream fishes, and provide a better understanding of the mechanisms underlying flow-ecology relationships for different species.06-Sep-2019

opencc-zeroNov 2019View details →
dryad36/100

Data from: Effects of roads and land use on frog distributions across spatial scales and regions in the eastern and central United States

Aim: Understanding the scales over which land use affects animal populations is critical for conservation planning, and it can provide information about the mechanisms that underlie correlations between species distributions and land use. We used a citizen-science database of anuran surveys to examine the relationship between road density, land use, and the distribution of frogs and toads across spatial scales and regions of the United States. Location: Eastern and Central United States Methods: We compiled data on anuran occupancy collected from 1999-2013 across 13 states in the North American Amphibian Monitoring Program, a citizen science survey of calling frogs. These data were indexed to measures of land use within buffers ranging from 300 m to 10 km. Results: The negative effects of road density and development on anuran richness were strongest at the smallest scales (300 – 1000 m), and this pattern was consistent across regions. In contrast, the relationships of anuran richness to agriculture and forest cover were similar across local scales but varied among regions. Richness had a negative relationship with agriculture/ forest loss in the Midwest but a positive relationship with agriculture in the Northeast. Anuran richness was more closely related to primary/secondary road density than to rural road density, and the negative effects of larger roads increased at smaller scales. Individual species differed in the scales over which roads and development affected their distributions, but these differences were not closely related to either body size or movement ability. Main conclusions: This study further refines our understanding of the relationship between roads and amphibian populations and highlights the need for research into the specific mechanisms by which roads affect amphibians. Additionally, we find that relationships between land use and species richness can differ substantially across regions, demonstrating that one should use caution in generalizing from one region to another, even when species composition is similar.

opencc-zeroDec 2015View details →
dryad36/100

Agricultural intensification and land use change: assessing country-level induced intensification, land sparing and rebound effect

<p><span><span><span><span><span><span><span><span><span><span><span>In the context of growing societal demands for land based products, crop production can be increased through expanding cropland or intensifying production on cultivated land. Intensification can allow sparing land for nature, but it can also drive further expansion of cropland, i.e. a rebound effect. Conversely, constraints on cropland expansion may induce intensification. We tested those hypotheses by investigating the bidirectional relations between changes in cropland area and intensity, using a global cross-country panel dataset over 1961-2016. We used a cointegration approach with additional tests to disentangle long and short-run causal relations between variables, and total factor productivity and yields as two measures of intensification. Over the long run we found support for the induced intensification thesis for low income countries. In the short run, intensification resulted in a rebound effect in middle-income countries, which include many key agricultural producers strongly competitive in global agricultural commodity markets. This rebound effect manifested for commodities with high price-elasticity of demand, including rubber, flex crops (sugarcane, palm oil and soybean), and tropical fruits. Over the long run, strong rebound effects remained for key commodities such as flex crops and rubber. Staple cereals such as wheat and rice manifested significant land sparing. In low-income countries, intensification driven by increases in total factor productivity was associated with a stronger rebound effect than yields increases. Agglomeration economies may drive yields increases for key tropical commodity crops. Our study design could allow addressing other complex long and short run causal dynamics in land and social-ecological systems.</span></span></span></span></span></span></span></span></span></span></span></p>

opencc-zeroMay 2020View details →
dryad36/100

Data from: The relative importance of green infrastructure as refuge habitat for pollinators increases with local land-use intensity

<p>1. Agricultural expansion and intensification have resulted in strong declines in farmland biodiversity across Europe. In many intensively farmed landscapes, linear landscape elements such as field boundaries, road verges and ditch banks are the main remaining green infrastructures providing refuge for biodiversity, and as such play a pivotal role in agri-environmental policies aiming at mitigating biodiversity loss. Yet, while we have a fairly good understanding of how agricultural intensification influences biodiversity on farmland, little is known about whether and how local land-use intensity affects biodiversity in nearby linear landscape elements and how this affects their role as biodiversity refuge.</p> <p>2. Focussing on pollinating insects, we examined the effects of local land-use intensity on biodiversity in agricultural fields and adjacent green infrastructures. In an intensively farmed area in South-Western France, we selected 23 agricultural grasslands and nearby field boundaries along a gradient in grassland cutting frequency which acted as a proxy for land-use intensity. We analysed how grassland cutting frequency affects species richness, abundance and community composition of wild bees and hoverflies in the grasslands and neighbouring field boundaries, and whether these effects differ across habitat types and species groups.</p> <p>3. Grassland cutting frequency negatively affected pollinator species richness and abundance in the grasslands, whereas pollinators in the neighbouring field boundaries were unaffected. These responses reflected the effects of cutting frequency on floral resources, with flower cover and richness decreasing in grasslands but not in field boundaries. As a result, the proportion of the local pollinator community supported by field boundaries increased with the increasing cutting frequency of the adjacent grassland.</p> <p>4. Common and rare pollinator species generally showed similar responses. Furthermore, communities of plants and pollinators in field boundaries next to intensively farmed grasslands were fairly similar to those next to extensively farmed ones.</p> <p>5. Synthesis and applications. Our results suggest that, as nearby land-use intensifies, flower-rich field boundaries become increasingly important as pollinator refuge habitats. Conserving field boundaries and other green infrastructures, and maintaining or enhancing their quality, therefore constitute important tools to conserve and promote pollinators in intensively farmed landscapes.</p>

opencc-zeroDec 2019View details →
dryad36/100

Data from: Current and historical land use influence soil-based ecosystem services in an urban landscape

Urban landscapes are increasingly recognized as providing important ecosystem services (ES) to their occupants. Yet, urban ES assessments often ignore the complex spatial heterogeneity and land-use history of cities. Soil-based services may be particularly susceptible to land-use legacy effects. We studied indicators of three soil-based ES – carbon storage, water quality regulation, and runoff regulation – in a historically agricultural urban landscape and asked: (1) How do ES indicators vary with contemporary land cover and time since development? (2) Do ES indicators vary primarily among land-cover classes, within land-cover classes, or within sites? (3) What is the relative contribution of urban land-cover classes to potential citywide ES provision? We measured biophysical indicators (soil carbon (C), available phosphorus (P), and saturated hydraulic conductivity (Ks)) in 100 sites across 5 land-cover classes, spanning an ~125 year gradient of time since development within each land-cover class. Potential for ES provision was substantial in urban green spaces, including developed land. Runoff regulation services (high Ks) were highest in forests; water quality regulation (low P) was highest in open spaces and grasslands; and open spaces and developed land (e.g., residential yards) had the highest C storage. In developed land covers, both C and P increased with time since development, indicating effects of historical land-use on contemporary ES and tradeoffs between two important ES. Among-site differences accounted for a high proportion of variance in soil properties in forests, grasslands, and open space, while residential areas had high within-site variability – underscoring the leverage city residents have to improve urban ES provision. Developed land covers contributed most ES supply at the citywide scale, even after accounting for potential impacts of impervious surfaces. Considering the full mosaic of urban green space and its history is needed to estimate the kinds and magnitude of ES provided in cities, and to augment regional ES assessments that often ignore or underestimate urban ES supply.

opencc-zeroDec 2017View details →
dryad36/100

The integration of sensory feedback in the modulation of anuran landing preparation

<p class="MsoBodyText">Controlled landing requires preparation. Mammals and bipedal birds vary how they prepare for landing by predicting the timing and magnitude of impact from the integration of visual and non-visual information. Here we explore how an animal that moves primarily through hopping, <i>Rhinella marina</i>, the cane toad, integrates sensory information to modulate landing preparation. Earlier work suggests toads may modulate landing preparation using predictions of impact timing and/or magnitude based on non-visual sensory feedback during takeoff rather than visual cues about the landing itself. Here we disentangled takeoff and landing conditions by hopping toads off platforms of different heights and measured electromyographic (EMG) activity of an elbow extensor, <i>m. anconeus</i>, and used high-speed motion capture to quantify whole body and forelimb kinematics to test how toads integrate visual and non-visual information in landing preparation. We asked two questions: 1) when they conflict, do toads correlate landing preparation with takeoff or landing conditions?  And 2) for hops with the same takeoff conditions, does visual information alter the timing of landing preparation?  We found that takeoff conditions are a better predictor of the onset of landing preparation than landing conditions, but that visual information is not ignored. When hopping off higher platforms, toads start to prepare for landing later when takeoff conditions are invariant. This suggests that, unlike mammals, toads prioritize non-visual sensory feedback about takeoff conditions to coordinate landing, but that they do integrate visual information to fine-tune landing preparation.</p>

opencc-zeroJan 2020View details →
dryad36/100

Data from: Legacy effects of land use on soil nitrous oxide emissions in annual crop and perennial grassland ecosystems

Land use conversions into and out of agriculture may influence soil-atmosphere greenhouse gas fluxes for many years. We tested the legacy effects of land use on cumulative soil nitrous oxide (N2O) fluxes for five years following conversion of 22 year-old Conservation Reserve Program (CRP) grasslands and conventionally tilled agricultural fields (AGR) to continuous no-till corn, switchgrass, and restored prairie. An unconverted CRP field served as a reference. We assessed the labile soil C pool of the upper 10 cm in 2009 (the conversion year) and in 2014 using short-term soil incubations. We also measured in situ soil N2O fluxes biweekly from 2009 through 2014 using static chambers except when soils were frozen. The labile C pool was ~2-fold higher in soils previously in CRP than in those formerly in tilled cropland. Five-year cumulative soil N2O emissions were ~3-fold higher in the corn system on former CRP than on former cropland despite similar fertilization rates (~184 kg N ha-1 yr-1). The lower cumulative emissions from corn on former cropland were similar to emissions from switchgrass that was fertilized less (~57 kg N ha-1 yr-1), regardless of former land use, and lowest emissions were observed from the unfertilized restored prairie and reference systems. Findings support the hypothesis that soil labile carbon levels modulate the response of soil N2O emissions to nitrogen inputs, with soils higher in labile carbon but otherwise similar – in this case reflecting land use history – responding more strongly to added nitrogen.

opencc-zeroDec 2017View details →
dryad36/100

Data from: Agricultural land-use history and restoration impact soil microbial biodiversity

<ol> <li>Human land uses, such as agriculture, can leave long-lasting legacies as ecosystems recover. As a consequence, active restoration may be necessary to overcome land-use legacies; however, few studies have evaluated the joint effects of agricultural history and restoration on ecological communities. Those that have studied this joint effect have largely focused on plants and ignored other communities, such as soil microbes.</li> <li>We conducted a large-scale experiment to understand how agricultural history and restoration tree thinning affect soil bacterial and fungal communities within longleaf pine savannas of the southern United States. This experiment contained 64 pairs of remnant (no history of tillage agriculture) and post-agricultural (reforested following abandonment from tillage agriculture &gt;60 years prior) longleaf pine savanna plots. Plots were each 1-ha and arranged into 27 blocks to minimize land-use decision making biases. We experimentally restored half of the remnant and post-agricultural plots by thinning trees to reinstate open-canopy savanna conditions and collected soils from all plots five growing seasons after tree thinning. We then evaluated soil bacterial and fungal communities using metabarcoding.</li> <li>Agricultural history increased bacterial diversity but decreased fungal diversity, while restoration increased both bacterial and fungal diversity. Both bacterial and fungal richness were correlated with a range of environmental variables including aboveground variables like leaf litter and plant diversity, and belowground variables such as soil nutrients, pH, and organic matter, many of which were also impacted by agricultural history and restoration.</li> <li>Fungal and bacterial community compositions were shaped by restoration and agricultural history resulting in four distinct communities across the four treatment combinations.</li> <li>Past agricultural land use left persistent legacies on soil microbial biodiversity, even over half a century after agricultural abandonment and after intensive restoration activities. The impacts of these changes on soil microbe biodiversity could play important roles in the functioning of ecosystems following agricultural abandonment and during restoration.</li> </ol>

opencc-zeroJan 2020View details →
dryad36/100

Data from: Local and regional drivers of taxonomic homogenization in stream communities along a land use gradient

Aim: The interaction of land use with local vs. regional processes driving biological homogenization (β-diversity loss) is poorly understood. We explored: i) stream β-diversity responses to land cover (forest vs. agriculture) in terms of physicochemistry and physicochemical heterogeneity, ii) whether these responses were constrained by the regional species pool, i.e. γ-diversity, or local assembly processes through local (α) diversity, iii) if local assembly operated through the regional species abundance distribution (SAD) or intraspecific spatial aggregation, and iv) the dependency on body size, dispersal capacity, and trophic level (producer vs. consumer). Location: United States of America, Canada, and France Time Period: 1993-2012 Major Taxa Studied: Stream diatoms, insects, and fish Methods: We analyzed six datasets totaling 1,225 stream samples. We compared diversity responses to eutrophication and physicochemical heterogeneity in forested vs. agricultural streams with regression methods. Null models quantified contribution of local assembly to β-diversity (β-deviance, βDEV) for both land covers and partitioned it into fractions explained by the regional SAD (βSAD) vs. aggregation (βAGG). Results: Eutrophication explained homogenization and more uneven regional SADs across groups, but local and regional biodiversity responses differed across taxa. βDEV was insensitive to land use. βSAD largely exceeded βAGG and was higher in agriculture. Main Conclusion: Eutrophication but not physicochemical heterogeneity of agricultural streams underlay β-diversity loss in diatoms, insects and fish. Agriculture did not constrain the magnitude of local vs. regional effects on β-diversity, but controlled the local assembly mechanisms. While the SAD fraction dominated in both land covers, it further increased in agriculture at the expense of aggregation. Notably, the regional SADs were more uneven in agriculture, exhibiting excess common species or stronger dominance. Diatoms and insects diverged from fish in terms of biodiversity, SAD shape, and βDEV patterns, suggesting an overriding role of body size and/or dispersal capacity compared to trophic position.

opencc-zeroJul 2019View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record

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