Skip to main content
Powered by ShareScore

Find research datasets worth reusing

Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.

2,614

datasets available to search

ShareScore release 0.9.0

Reset

Dataset results

2,614 results for “RNA-seq analysis”

Learn how ShareScore rates datasets ↗
geo24/100

RNA-seq analysis of axolotl embryonic oropharyngeal endoderm explants transcriptome

GEO Series GSE151535. Ambystoma mexicanum. 17 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2020View details →
geo24/100

RNA-seq analysis of the kidneys from WT and Tet2-/- mice

GEO Series GSE151260. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2020View details →
geo24/100

Single-cell analysis implicates Th17 to Th2 cell plasticity in the pathogenesis of palmoplantar pustulosis [RNA-Seq]

GEO Series GSE185856. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2022View details →
geo24/100

RNA-seq analysis of transcriptomic changes in human primary leukemia samples and cell lines

GEO Series GSE199698. Homo sapiens. 72 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2023View details →
geo24/100

RNA-seq analysis of Arabidopsis roots of Col-0, fls2 and UBQ10::mCitrine-IMA1 in response to +Fe, +Fe+flg22, -Fe and -Fe+flg22

GEO Series GSE213557. Arabidopsis thaliana. 36 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2023View details →
geo24/100

Whole genome analysis of the methylome and hydroxymethylome in normal and malignant lung and liver [RNA-Seq]

GEO Series GSE70089. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2016View details →
geo24/100

RNA-seq analysis of uterine flushing fluids of three donor and recipient Xianan cows 7 days after fertilization

GEO Series GSE216746. Bos taurus. 6 samples. Type: Non-coding RNA profiling by high throughput sequencing.

openGEO-OpenNov 2022View details →
geo24/100

Time course RNA-seq analysis of barley powdery mildew fungus Bgh infecting immunocompromised Arabidopsis thaliana

GEO Series GSE43163. Blumeria hordei. 48 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMay 2013View details →
geo24/100

Integrated RNA-seq and sRNA-seq analysis reveals miRNA effects on secondary metabolism in Solanum tuberosum L [miRNA-seq]

GEO Series GSE79984. Solanum tuberosum. 4 samples. Type: Non-coding RNA profiling by high throughput sequencing.

openGEO-OpenSep 2016View details →
geo24/100

Identification of genes regulated by the MADS transcription factor (TF), SEPALLATA3 spliced variant, SEP3.3 , in the context of the triple sep1 sep2 sep3 mutant background, by RNA-Seq analysis

GEO Series GSE226520. Arabidopsis thaliana. 3 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2025View details →
geo24/100

RNA-seq analysis of recombinant Synechocystis sp. 6803 provides important insights for understanding polyhydroxyalkanoate production in cyanobacteria under photoautotrophic conditions

GEO Series GSE50688. Synechocystis sp. PCC 6803. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2013View details →
geo24/100

Expression profile analysis of long non-coding RNAs in condyloma acuminatum in a Chinese female population by RNA-sequencing and bioinformatics [RNA-seq]

GEO Series GSE172137. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2024View details →
geo24/100

Single cell RNA-Seq analysis of the human embryo dorsal aorta

GEO Series GSE151876. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2020View details →
geo24/100

single-cell RNA-seq analysis for high-dose testosterone treated LuCaP 96CR PDX tumors

GEO Series GSE275027. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenFeb 2025View details →
geo24/100

Single-cell RNA-seq analysis identifies distinct myeloid cells in COVID19 vaccination- associated encephalitis (set 1)

GEO Series GSE205606. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing; Other.

openGEO-OpenFeb 2023View details →
geo24/100

RNA-seq analysis of zip-1(jy13) mutants (ERT590) following 0.5 h and 4 h BTZ treatment

GEO Series GSE183361. Caenorhabditis elegans. 24 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenSep 2021View details →
geo24/100

RNA-Seq Analysis of Mutant Prss56-/- And Control Prss56+/- Retinal Transcriptomes

GEO Series GSE162647. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2021View details →
geo24/100

Single cell RNA-seq analysis reveals the crucial role of Collagen triplex helix repeat containing-1 (Cthrc1) cardiac fibroblasts for ventricular remodeling after myocardial infarction

GEO Series GSE261428. Mus musculus. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenDec 2025View details →
geo24/100

RNA-Seq analysis of wild type Pseudomonas aeruginosa adhered to a surface for 5, 10, 15, 30, 45, or 60min

GEO Series GSE194320. Pseudomonas aeruginosa PAO1. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJan 2022View details →
geo24/100

RNA-seq analysis of TALEN-mediated LATS2 knockout HeLa-S3 cells

GEO Series GSE63537. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJul 2016View details →

ScienceDex guides

Understand access before you commit

These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

Compare curated datasets

Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record