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125 results for “Animal breeding”

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edi36/100

Shortgrass Steppe site, station USGS Bird Breeding Survey area 17901, Rockport, CO, study of animal species richness of Aves in units of number on a yearly timescale

The EcoTrends project was established in 2004 by Dr. Debra Peters (Jornada Basin LTER, USDA-ARS Jornada Experimental Range) and Dr. Ariel Lugo (Luquillo LTER, USDA-FS Luquillo Experimental Forest) to support the collection and analysis of long-term ecological datasets. The project is a large synthesis effort focused on improving the accessibility and use of long-term data. At present, there are ~50 state and federally funded research sites that are participating and contributing to the EcoTrends project, including all 26 Long-Term Ecological Research (LTER) sites and sites funded by the USDA Agriculture Research Service (ARS), USDA Forest Service, US Department of Energy, US Geological Survey (USGS) and numerous universities. Data from the EcoTrends project are available through an exploratory web portal (http://www.ecotrends.info). This web portal enables the continuation of data compilation and accessibility by users through an interactive web application. Ongoing data compilation is updated through both manual and automatic processing as part of the LTER Provenance Aware Synthesis Tracking Architecture (PASTA). The web portal is a collaboration between the Jornada LTER and the LTER Network Office. The following dataset from Shortgrass Steppe (SGS) contains animal species richness of Aves measurements in number units and were aggregated to a yearly timescale.

openOpenJan 2020View details →
dryad28/100

Data from: Cohabitation with farm animals rather than breeding effort increases the infection with feather-associated bacteria in the barn swallow Hirundo rustica

Feather-associated bacteria are widespread inhabitants of avian plumage. However, the determinants of the between-individual variation in plumage bacterial loads are less well understood. Infection intensities can be determined by ecological factors, such as breeding habitat, and can be actively regulated by hosts via preening. Preening, yet, is a resource intensive activity, and thus might be traded-off against reproductive investment in breeding birds. Here, we studied barn swallows Hirundo rustica to assess the bacterial cost of reproduction in relation to nesting site micro-habitats. Barn swallows prefer to breed in the company of large-sized farm animals, although the presence of mammalian livestock in barns assures a warm and humid micro-climate that favours bacterial proliferation. Thus, we experimentally manipulated brood sizes of birds breeding in barns with, or without, farm animals and measured total cultivable bacteria (TCB) and feather-degrading bacteria (FDB) from the plumage. We found that the abundance of feather-associated bacteria (i.e. both TCB and FDB) in females, but not males, breeding in barns with livestock were significantly higher than in conspecifics breeding in empty barns. Plumage bacterial loads, however, were not affected by brood size manipulations in either sex. In addition, we report a negative relationship between both TCB and FDB and hatching date in females, and several sex and seasonal differences in plumage bacterial abundances. Our study is the first to show that breeding micro-habitat (i.e. livestock co-tenancy) has consequences for the abundance of feather-associated bacteria.

opencc-zeroDec 2016View details →
dryad28/100

Data from: Genetic rescue of an endangered domestic animal through outcrossing with closely related breeds: a case study of the Norwegian Lundehund

Open the record for dataset details and reuse information.

publicJun 2017View details →
dryad28/100

Data from: Cohabitation with farm animals rather than breeding effort increases the infection with feather-associated bacteria in the barn swallow Hirundo rustica

Open the record for dataset details and reuse information.

publicFeb 2017View details →
geo20/100

The effect of diet and breed on global gene expression profiles of animals divergent for RFI

GEO Series GSE113135. Bos taurus. 111 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenJun 2023View details →

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record