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140 results for “COI sequence”
Figures 6-14 from: Jürgenstein S, Kurina O, Põldmaa K (2015)) The Mycetophila ruficollis Meigen (Diptera, Mycetophilidae) group in Europe: elucidating species delimitation with COI and ITS2 sequence data. ZooKeys 508: 15-51. https://doi.org/10.3897/zookeys.508.9814
Figures 6-14 - Dorsal branch of gonostylus. 6 Mycetophila britannica 7 Mycetophila idonea 8 Mycetophila evanida 9 Mycetophila ichneumonea 10 Mycetophila ruficollis 11 Mycetophila sepulta 12 Mycetophila strobli 13 Mycetophila suffusala 14 Mycetophila uninotata. Scale bar = 0.1 mm. Abbreviations: ba = basal angle; bm = basal margin; lm = lateral margin; pm = posterior margin; mb = medial bristle; dpp= distal posterior process; ppp = proximal posterior process.
Figures 15-20 from: Jürgenstein S, Kurina O, Põldmaa K (2015)) The Mycetophila ruficollis Meigen (Diptera, Mycetophilidae) group in Europe: elucidating species delimitation with COI and ITS2 sequence data. ZooKeys 508: 15-51. https://doi.org/10.3897/zookeys.508.9814
Figures 15-20 - Ventral branch of gonostylus, ventral view (15, 17, 19) and internal view (16, 18, 20). 15, 16 Mycetophila britannica 17, 18 Mycetophila idonea 19, 20 Mycetophila ichneumonea. Scale bar = 0.05 mm. Abbreviations: pp = posterior process; sp = posterior spines on the ventral branch of gonostylus.
Figure 9 from: Jouladeh Roudbar A, Eagderi S, Esmaeili HR, Coad BW, Bogutskaya N (2016) A molecular approach to the genus Alburnoides using COI sequences data set and the description of a new species, A. damghani, from the Damghan River system (the Dasht-e Kavir Basin, Iran) (Actinopterygii, Cyprinidae). ZooKeys 579: 157-181. https://doi.org/10.3897/zookeys.579.7665
Figure 9 - Uncatalogued Alburnoides coadi, 84.0 mm SL; Iran, Tehran Prov., Nam River, at Firoz Koh, 35°43'20.8"N 52°39'20.0"E.
Figure 8 from: Jouladeh Roudbar A, Eagderi S, Esmaeili HR, Coad BW, Bogutskaya N (2016) A molecular approach to the genus Alburnoides using COI sequences data set and the description of a new species, A. damghani, from the Damghan River system (the Dasht-e Kavir Basin, Iran) (Actinopterygii, Cyprinidae). ZooKeys 579: 157-181. https://doi.org/10.3897/zookeys.579.7665
Figure 8 - Results of a DMS analysis showing observed similarities/dissimilarities (distances) between the examined groups of samples of Alburnoides, from the Caspian Sea basin and adjacent endorheic basins, based on meristic characters (Table 5). 1 Alburnoides eichwaldii 2 Alburnoides cf. eichwaldii: west of Safid River 3 Alburnoides samiii 4 Alburnoides tabarestanensis 5 Alburnoides parhami 6 Alburnoides parhami (data from Mousavi-Sabet et al. 2015b) 7 Alburnoides holciki 8 Alburnoides varentsovi 9 Alburnoides sp. Amu Darya River 10 Alburnoides damghani sp. n. 11 Alburnoides namaki 12 Alburnoides coadi (data from Mousavi-Sabet et al. 2015b) 13 Alburnoides petrubanarescui.
Figure 6 from: Jouladeh Roudbar A, Eagderi S, Esmaeili HR, Coad BW, Bogutskaya N (2016) A molecular approach to the genus Alburnoides using COI sequences data set and the description of a new species, A. damghani, from the Damghan River system (the Dasht-e Kavir Basin, Iran) (Actinopterygii, Cyprinidae). ZooKeys 579: 157-181. https://doi.org/10.3897/zookeys.579.7665
Figure 6 - Alburnoides damghani sp. n., radiograph of a paratype (ZM-CBSU 2011-1) showing 20+20 vertebral formula.
Figure 5 from: Jouladeh Roudbar A, Eagderi S, Esmaeili HR, Coad BW, Bogutskaya N (2016) A molecular approach to the genus Alburnoides using COI sequences data set and the description of a new species, A. damghani, from the Damghan River system (the Dasht-e Kavir Basin, Iran) (Actinopterygii, Cyprinidae). ZooKeys 579: 157-181. https://doi.org/10.3897/zookeys.579.7665
Figure 5 - Live specimen of Alburnoides damghani sp. n., Iran, Semnan Prov., Cheshmeh Ali, Damghan River tributary.
Figure 4 from: Jouladeh Roudbar A, Eagderi S, Esmaeili HR, Coad BW, Bogutskaya N (2016) A molecular approach to the genus Alburnoides using COI sequences data set and the description of a new species, A. damghani, from the Damghan River system (the Dasht-e Kavir Basin, Iran) (Actinopterygii, Cyprinidae). ZooKeys 579: 157-181. https://doi.org/10.3897/zookeys.579.7665
Figure 4 - Alburnoides damghani sp. n., paratypes CMNFI 2015-0091A, a, 67.6 mm SL, b, 60.5 mm SL, Iran, Semnan Prov., Cheshmeh Ali, Damghan River tributary.
Figure 3 from: Jouladeh Roudbar A, Eagderi S, Esmaeili HR, Coad BW, Bogutskaya N (2016) A molecular approach to the genus Alburnoides using COI sequences data set and the description of a new species, A. damghani, from the Damghan River system (the Dasht-e Kavir Basin, Iran) (Actinopterygii, Cyprinidae). ZooKeys 579: 157-181. https://doi.org/10.3897/zookeys.579.7665
Figure 3 - Alburnoides damghani sp. n., CMNFI 2015-0091, holotype, female, 67.0 mm SL; Iran, Semnan Prov., Cheshmeh Ali, Damghan River tributary.
Figure 2 from: Jouladeh Roudbar A, Eagderi S, Esmaeili HR, Coad BW, Bogutskaya N (2016) A molecular approach to the genus Alburnoides using COI sequences data set and the description of a new species, A. damghani, from the Damghan River system (the Dasht-e Kavir Basin, Iran) (Actinopterygii, Cyprinidae). ZooKeys 579: 157-181. https://doi.org/10.3897/zookeys.579.7665
Figure 2 - Bayesian analysis (based on COI gene sequences) of phylogenetic relationships of Alburnoides damghani and related taxa.
Figure 1 from: Jouladeh Roudbar A, Eagderi S, Esmaeili HR, Coad BW, Bogutskaya N (2016) A molecular approach to the genus Alburnoides using COI sequences data set and the description of a new species, A. damghani, from the Damghan River system (the Dasht-e Kavir Basin, Iran) (Actinopterygii, Cyprinidae). ZooKeys 579: 157-181. https://doi.org/10.3897/zookeys.579.7665
Figure 1 - Distribution and sampling sites of Alburnoides species in Iran and adjacent areas. 1 Alburnoides eichwaldii: Aras River, Kura River drainage 2 Alburnoides cf. eichwaldii: west of Safid River 3 Alburnoides samiii: Safid River 4 Alburnoides tabarestanensis: Tajan River 5 Alburnoides parhami: Atrek River 6 Alburnoides parhami: type locality Baba-Aman stream 7 Alburnoides holciki: Hari River 8 Alburnoides varentsovi: Ashkhabadka River, northern slope of Kopetdag Mountains 9 Alburnoides sp. Amu Darya River 10 Alburnoides damghani sp. n.: Cheshmeh Ali, Damghan River system, Dasht-e Kavir basin 11 Alburnoides namaki: Qarah River, Namak Lake basin 12 Alburnoides coadi: Nam River, Dasht-e Kavir basin 13 Alburnoides petrubanarescui: Orumiyeh Lake basin 14 Alburnoides nicolausi: Nor Abad River, Tigris River system 15 Alburnoides idignensis: Bid Sorkh River, Tigris River system 16 Alburnoides qanati: Pulvar River, Kor River system 17 Alburnoides qanati: Masih Spring, Sirjan basin.
Figure 8 from: Leblanc L, Tsatsia F, Doorenweerd C (2021) Novel lures and COI sequences reveal cryptic new species of Bactrocera fruit flies in the Solomon Islands (Diptera, Tephritidae, Dacini). ZooKeys 1057: 49-103. https://doi.org/10.3897/zookeys.1057.68375
Figure 8 Bactrocera bryoniae (Tryon) A head B head and scutum C abdomen D lateral view and wing.
Figure 7 from: Leblanc L, Tsatsia F, Doorenweerd C (2021) Novel lures and COI sequences reveal cryptic new species of Bactrocera fruit flies in the Solomon Islands (Diptera, Tephritidae, Dacini). ZooKeys 1057: 49-103. https://doi.org/10.3897/zookeys.1057.68375
Figure 7 Bactrocera simulata (Malloch) A head B head and scutum C abdomen D lateral view and wing.
Figure 15 from: Leblanc L, Tsatsia F, Doorenweerd C (2021) Novel lures and COI sequences reveal cryptic new species of Bactrocera fruit flies in the Solomon Islands (Diptera, Tephritidae, Dacini). ZooKeys 1057: 49-103. https://doi.org/10.3897/zookeys.1057.68375
Figure 15 Bactrocera tsatsiai sp. nov. lateral view.
Figure 13 from: Leblanc L, Tsatsia F, Doorenweerd C (2021) Novel lures and COI sequences reveal cryptic new species of Bactrocera fruit flies in the Solomon Islands (Diptera, Tephritidae, Dacini). ZooKeys 1057: 49-103. https://doi.org/10.3897/zookeys.1057.68375
Figure 13 Bactrocera enochra (Drew) A head B head and scutum C abdomen D wing E lateral view.
Figure 11 from: Leblanc L, Tsatsia F, Doorenweerd C (2021) Novel lures and COI sequences reveal cryptic new species of Bactrocera fruit flies in the Solomon Islands (Diptera, Tephritidae, Dacini). ZooKeys 1057: 49-103. https://doi.org/10.3897/zookeys.1057.68375
Figure 11 Bactrocera morula Drew A head B head and scutum C abdomen D wing E lateral view.
Figure 7 from: Jouladeh Roudbar A, Eagderi S, Esmaeili HR, Coad BW, Bogutskaya N (2016) A molecular approach to the genus Alburnoides using COI sequences data set and the description of a new species, A. damghani, from the Damghan River system (the Dasht-e Kavir Basin, Iran) (Actinopterygii, Cyprinidae). ZooKeys 579: 157-181. https://doi.org/10.3897/zookeys.579.7665
Figure 7 - Two views of Cheshmeh Ali, Damghan, type locality of Alburnoides damghani sp. n.
Aligned and reduced 5'-COI sequence alignment from Steinke et al. 2009
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FIGURE 2 in New species, Agnoea digitiella sp. nov., of the family Lypusidae (Lepidoptera: Gelechioidea) based on morphology and COI sequences
FIGURE 2. Distribution of genetic divergences based on the P-distances for COI sequences according to taxonomic levels. Total number of comparisons; 464 intraspecific pairs within species and 2263 interspecific pairs between the species.
FIGURE 1 in New species, Agnoea digitiella sp. nov., of the family Lypusidae (Lepidoptera: Gelechioidea) based on morphology and COI sequences
FIGURE 1. Agnoea digitiella Kim sp. nov. A, labial palpus; B, wing pattern; C, male genitalia; D, aedeagus; E, uncus and gnathos; F, vinculum; G, sacculus; H, abdomen. Scale bar: 1.0mm.
FIGURE 3. A in New species, Agnoea digitiella sp. nov., of the family Lypusidae (Lepidoptera: Gelechioidea) based on morphology and COI sequences
FIGURE 3. A radiation form-NJ tree using COI sequences from eight species. The optimal tree with the sum of branch length = 0.38764440 is shown. The tree is drawn to scale, with branch lengths in the same units as those of the genetic distances used to infer the phylogenetic tree. The evolutionary distances were computed using the Kimura 2-parameter method. There were a total of 633 positions in the final dataset. The name of species follows recent classification (Sinev & Lvovksy, 2014).
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